Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 17 2528 NP_001087241 17 2528 XP_005265799 17 2528 XP_005265798 17 2528 XP_005265797 17 2528 NP_001131145 16 5631 NP_703194 16 5631 NP_060090 16 5631 NP_036350 16 5631 NP_004507 16 5631 NP_055523 16 5631 NP_001273142 16 5631 NP_001273141 16 5631 NP_115632 16 5631 XP_006722805 16 5631 XP_006719769 16 5631 NP_005202 16 7355 NP_001275634 16 7355 NP_001726 16 7355 NP_001007526 16 7355 NP_001277284 16 7355 NP_653267 16 7355 XP_006717373 16 7355 XP_005265662 16 7355 NP_001239 16 7355 NP_005290 15 9605 NP_006019 15 9605 NP_073751 15 9605 NP_060004 15 9605 NP_808211 15 9605 NP_803545 15 9605 NP_001093582 15 9605 NP_003703 15 9605 XP_006726450 15 9605 XP_005258189 15 9605 XP_006722402 15 9605 XP_006712223 15 9605 XP_006710190 15 9605 NP_001129386 15 9605>NP_000213 Length = 976 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AKCMAFLAS 9 AK MAFLAS Sbjct: 777 AKGMAFLAS 785>NP_001087241 Length = 972 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AKCMAFLAS 9 AK MAFLAS Sbjct: 773 AKGMAFLAS 781>XP_005265799 Length = 973 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AKCMAFLAS 9 AK MAFLAS Sbjct: 774 AKGMAFLAS 782>XP_005265798 Length = 976 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AKCMAFLAS 9 AK MAFLAS Sbjct: 777 AKGMAFLAS 785>XP_005265797 Length = 977 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AKCMAFLAS 9 AK MAFLAS Sbjct: 778 AKGMAFLAS 786>NP_001131145 Length = 706 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KCMAFLAS 9 KC+A LAS Sbjct: 202 KCLAALAS 209>NP_703194 Length = 690 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KCMAFLAS 9 KC+A LAS Sbjct: 202 KCLAALAS 209>NP_060090 Length = 898 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KCMAFLAS 9 KC+A LAS Sbjct: 202 KCLAALAS 209>NP_036350 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KCMAFLAS 9 KC+A LAS Sbjct: 202 KCLAALAS 209>NP_004507 Length = 702 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KCMAFLAS 9 KC+A LAS Sbjct: 202 KCLAALAS 209>NP_055523 Length = 2209 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KCMAFLAS 9 +C+ FLAS Sbjct: 1918 RCITFLAS 1925>NP_001273142 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KCMAFLAS 9 KC+AF+ S Sbjct: 249 KCLAFVPS 256>NP_001273141 Length = 410 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KCMAFLAS 9 KC+AF+ S Sbjct: 289 KCLAFVPS 296>NP_115632 Length = 514 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KCMAFLAS 9 KC+AF+ S Sbjct: 393 KCLAFVPS 400>XP_006722805 Length = 855 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KCMAFLAS 9 KC+A LAS Sbjct: 202 KCLAALAS 209>XP_006719769 Length = 2209 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KCMAFLAS 9 +C+ FLAS Sbjct: 1918 RCITFLAS 1925>NP_005202 Length = 972 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AKCMAFLAS 9 A+ MAFLAS Sbjct: 763 AQGMAFLAS 771>NP_001275634 Length = 972 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AKCMAFLAS 9 A+ MAFLAS Sbjct: 763 AQGMAFLAS 771>NP_001726 Length = 1676 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AKCMAFLAS 9 + C AFLA+ Sbjct: 1655 SSCQAFLAN 1663>NP_001007526 Length = 1432 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 CMAFLAS 9 CMA LAS Sbjct: 1005 CMAVLAS 1011>NP_001277284 Length = 1429 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 CMAFLAS 9 CMA LAS Sbjct: 870 CMAVLAS 876>NP_653267 Length = 4753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 KCMAF 6 KCMAF Sbjct: 1036 KCMAF 1040>XP_006717373 Length = 1087 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CMAFLA 8 C+AFLA Sbjct: 6 CLAFLA 11>XP_005265662 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CMAFLA 8 C+AFLA Sbjct: 501 CLAFLA 506>NP_001239 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CMAFLA 8 C+AFLA Sbjct: 501 CLAFLA 506>NP_005290 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AKCMAFLAS 9 A C+ FLA+ Sbjct: 64 AACLPFLAA 72>NP_006019 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 CMAFL 7 CMAFL Sbjct: 309 CMAFL 313>NP_073751 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CMAFLAS 9 C AF+AS Sbjct: 59 CAAFIAS 65>NP_060004 Length = 1941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 AKCMAFLA 8 A+C FLA Sbjct: 796 ARCRGFLA 803>NP_808211 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 CMAFLA 8 CM FLA Sbjct: 196 CMVFLA 201>NP_803545 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 CMAFLA 8 CM FLA Sbjct: 119 CMVFLA 124>NP_001093582 Length = 1941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 AKCMAFLA 8 A+C FLA Sbjct: 796 ARCRGFLA 803>NP_003703 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 CMAFLA 8 CM FLA Sbjct: 175 CMVFLA 180>XP_006726450 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AKCMAFLA 8 ++CM FLA Sbjct: 39 SQCMYFLA 46>XP_005258189 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CMAFLAS 9 C AF+AS Sbjct: 59 CAAFIAS 65>XP_006722402 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CMAFLAS 9 C AF+AS Sbjct: 59 CAAFIAS 65>XP_006712223 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AKCMAFLA 8 ++CM FLA Sbjct: 39 SQCMYFLA 46>XP_006710190 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AKCMAFLA 8 ++CM FLA Sbjct: 39 SQCMYFLA 46>NP_001129386 Length = 1503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 AKCMAF 6 A CMAF Sbjct: 1148 ASCMAF 1153Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.125 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 518,817 Number of extensions: 605 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |