Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_733751                                                              21     175
XP_006716142                                                           21     175
XP_005250088                                                           21     175
XP_006716141                                                           21     175
XP_005250085                                                           21     175
XP_006716140                                                           21     175
XP_005250084                                                           21     175
XP_005250083                                                           21     175
XP_005250082                                                           21     175
NP_036234                                                              17    3301
NP_001036146                                                           17    3301
XP_005263522                                                           17    3301
XP_006710716                                                           17    3301
XP_005263521                                                           17    3301
NP_005202                                                              17    4312
NP_001275634                                                           17    4312
NP_006717                                                              17    4312
NP_056493                                                              17    4312
NP_001186211                                                           17    4312
XP_006719869                                                           17    4312
XP_006719868                                                           17    4312
XP_005266409                                                           17    4312
XP_005266407                                                           17    4312
XP_005266403                                                           17    4312
XP_006719867                                                           17    4312
XP_006719866                                                           17    4312
XP_005266405                                                           17    4312
XP_005266404                                                           17    4312
XP_005263433                                                           17    4312
XP_005263432                                                           17    4312
XP_005263431                                                           17    4312
XP_006714492                                                           17    4312
XP_005263430                                                           17    4312
XP_005263429                                                           17    4312
NP_001191126                                                           17    4312
NP_001866                                                              16    5631
NP_078911                                                              16    5631
NP_004332                                                              16    5631
NP_001116105                                                           16    5631
XP_006717294                                                           16    5631
XP_005252184                                                           16    5631
XP_005252183                                                           16    5631
XP_005264615                                                           16    5631
XP_006712164                                                           16    5631
XP_005264614                                                           16    5631
XP_005264613                                                           16    5631
XP_005264612                                                           16    5631
NP_000515                                                              16    7355
NP_116182                                                              15    9605
NP_001026913                                                           15    9605
NP_001129965                                                           15    9605
NP_001274738                                                           15    9605
NP_612354                                                              15    9605
XP_006713882                                                           15    9605
XP_006713881                                                           15    9605
XP_005271342                                                           15    9605
>NP_733751
          Length = 4911

 Score = 21.2 bits (43), Expect =   175
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    AITDPVMKA 9
            AITDP+MKA
Sbjct: 3091 AITDPIMKA 3099
>XP_006716142
          Length = 4927

 Score = 21.2 bits (43), Expect =   175
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    AITDPVMKA 9
            AITDP+MKA
Sbjct: 3108 AITDPIMKA 3116
>XP_005250088
          Length = 4928

 Score = 21.2 bits (43), Expect =   175
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    AITDPVMKA 9
            AITDP+MKA
Sbjct: 3108 AITDPIMKA 3116
>XP_006716141
          Length = 4959

 Score = 21.2 bits (43), Expect =   175
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    AITDPVMKA 9
            AITDP+MKA
Sbjct: 3108 AITDPIMKA 3116
>XP_005250085
          Length = 4979

 Score = 21.2 bits (43), Expect =   175
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    AITDPVMKA 9
            AITDP+MKA
Sbjct: 3108 AITDPIMKA 3116
>XP_006716140
          Length = 4982

 Score = 21.2 bits (43), Expect =   175
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    AITDPVMKA 9
            AITDP+MKA
Sbjct: 3108 AITDPIMKA 3116
>XP_005250084
          Length = 4982

 Score = 21.2 bits (43), Expect =   175
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    AITDPVMKA 9
            AITDP+MKA
Sbjct: 3108 AITDPIMKA 3116
>XP_005250083
          Length = 4982

 Score = 21.2 bits (43), Expect =   175
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    AITDPVMKA 9
            AITDP+MKA
Sbjct: 3107 AITDPIMKA 3115
>XP_005250082
          Length = 4983

 Score = 21.2 bits (43), Expect =   175
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    AITDPVMKA 9
            AITDP+MKA
Sbjct: 3108 AITDPIMKA 3116
>NP_036234
          Length = 1566

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   ITDPVMK 8
           ITDPV+K
Sbjct: 217 ITDPVIK 223
>NP_001036146
          Length = 1566

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   ITDPVMK 8
           ITDPV+K
Sbjct: 217 ITDPVIK 223
>XP_005263522
          Length = 1524

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   ITDPVMK 8
           ITDPV+K
Sbjct: 175 ITDPVIK 181
>XP_006710716
          Length = 1566

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   ITDPVMK 8
           ITDPV+K
Sbjct: 217 ITDPVIK 223
>XP_005263521
          Length = 1566

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   ITDPVMK 8
           ITDPV+K
Sbjct: 217 ITDPVIK 223
>NP_005202
          Length = 972

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   ITDPVMKA 9
           +TDPV++A
Sbjct: 129 LTDPVLEA 136
>NP_001275634
          Length = 972

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   ITDPVMKA 9
           +TDPV++A
Sbjct: 129 LTDPVLEA 136
>NP_006717
          Length = 2863

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    AITDPVMK 8
            +ITDPV++
Sbjct: 2457 SITDPVLR 2464
>NP_056493
          Length = 2946

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    AITDPVMK 8
            +ITDPV++
Sbjct: 2531 SITDPVLR 2538
>NP_001186211
          Length = 2851

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    AITDPVMK 8
            +ITDPV++
Sbjct: 2446 SITDPVLR 2453
>XP_006719869
          Length = 2943

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    AITDPVMK 8
            +ITDPV++
Sbjct: 2528 SITDPVLR 2535
>XP_006719868
          Length = 2938

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    AITDPVMK 8
            +ITDPV++
Sbjct: 2528 SITDPVLR 2535
>XP_005266409
          Length = 1430

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    AITDPVMK 8
            +ITDPV++
Sbjct: 994  SITDPVLR 1001
>XP_005266407
          Length = 2641

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    AITDPVMK 8
            +ITDPV++
Sbjct: 2205 SITDPVLR 2212
>XP_005266403
          Length = 2941

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    AITDPVMK 8
            +ITDPV++
Sbjct: 2531 SITDPVLR 2538
>XP_006719867
          Length = 2961

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    AITDPVMK 8
            +ITDPV++
Sbjct: 2525 SITDPVLR 2532
>XP_006719866
          Length = 2962

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    AITDPVMK 8
            +ITDPV++
Sbjct: 2531 SITDPVLR 2538
>XP_005266405
          Length = 2964

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    AITDPVMK 8
            +ITDPV++
Sbjct: 2528 SITDPVLR 2535
>XP_005266404
          Length = 2967

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    AITDPVMK 8
            +ITDPV++
Sbjct: 2531 SITDPVLR 2538
>XP_005263433
          Length = 2832

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    AITDPVMK 8
            +ITDPV++
Sbjct: 2421 SITDPVLR 2428
>XP_005263432
          Length = 2852

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    AITDPVMK 8
            +ITDPV++
Sbjct: 2446 SITDPVLR 2453
>XP_005263431
          Length = 2857

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    AITDPVMK 8
            +ITDPV++
Sbjct: 2446 SITDPVLR 2453
>XP_006714492
          Length = 2867

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    AITDPVMK 8
            +ITDPV++
Sbjct: 2457 SITDPVLR 2464
>XP_005263430
          Length = 2868

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    AITDPVMK 8
            +ITDPV++
Sbjct: 2457 SITDPVLR 2464
>XP_005263429
          Length = 2868

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    AITDPVMK 8
            +ITDPV++
Sbjct: 2457 SITDPVLR 2464
>NP_001191126
          Length = 739

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   AITDPVMK 8
           +ITDPV++
Sbjct: 324 SITDPVLR 331
>NP_001866
          Length = 1500

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  AITDPVMK 8
          AITDP  K
Sbjct: 83 AITDPAYK 90
>NP_078911
          Length = 725

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   ITDPVMKA 9
           I DP MKA
Sbjct: 141 IEDPAMKA 148
>NP_004332
          Length = 2225

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  AITDPVMKA 9
          A+TDP  KA
Sbjct: 39 ALTDPSYKA 47
>NP_001116105
          Length = 1506

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  AITDPVMK 8
          AITDP  K
Sbjct: 89 AITDPAYK 96
>XP_006717294
          Length = 692

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   ITDPVMKA 9
           I DP MKA
Sbjct: 141 IEDPAMKA 148
>XP_005252184
          Length = 725

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   ITDPVMKA 9
           I DP MKA
Sbjct: 141 IEDPAMKA 148
>XP_005252183
          Length = 725

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   ITDPVMKA 9
           I DP MKA
Sbjct: 141 IEDPAMKA 148
>XP_005264615
          Length = 2162

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  AITDPVMKA 9
          A+TDP  KA
Sbjct: 39 ALTDPSYKA 47
>XP_006712164
          Length = 2179

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  AITDPVMKA 9
          A+TDP  KA
Sbjct: 39 ALTDPSYKA 47
>XP_005264614
          Length = 2191

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  AITDPVMKA 9
          A+TDP  KA
Sbjct: 39 ALTDPSYKA 47
>XP_005264613
          Length = 2208

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  AITDPVMKA 9
          A+TDP  KA
Sbjct: 39 ALTDPSYKA 47
>XP_005264612
          Length = 2242

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  AITDPVMKA 9
          A+TDP  KA
Sbjct: 39 ALTDPSYKA 47
>NP_000515
          Length = 422

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   AITDPV 6
           AITDP+
Sbjct: 137 AITDPI 142
>NP_116182
          Length = 530

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   AITDPVM 7
           AITDP++
Sbjct: 94  AITDPLV 100
>NP_001026913
          Length = 622

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   AITDPVMKA 9
           A  DP+M+A
Sbjct: 247 AANDPLMRA 255
>NP_001129965
          Length = 543

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   AITDPVM 7
           AITDP++
Sbjct: 107 AITDPLV 113
>NP_001274738
          Length = 491

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  AITDPVM 7
          AITDP++
Sbjct: 57 AITDPLV 63
>NP_612354
          Length = 1242

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   AITDPV 6
           A+TDPV
Sbjct: 634 ALTDPV 639
>XP_006713882
          Length = 1242

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   AITDPV 6
           A+TDPV
Sbjct: 634 ALTDPV 639
>XP_006713881
          Length = 1024

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   AITDPV 6
           A+TDPV
Sbjct: 416 ALTDPV 421
>XP_005271342
          Length = 528

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  AITDPVM 7
          AITDP++
Sbjct: 92 AITDPLV 98
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.318    0.126    0.344 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 602,069
Number of extensions: 650
Number of successful extensions: 56
Number of sequences better than 10000.0: 56
Number of HSP's gapped: 56
Number of HSP's successfully gapped: 56
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.8 bits)
S2: 28 (15.4 bits)

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