Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 21 175 XP_006716142 21 175 XP_005250088 21 175 XP_006716141 21 175 XP_005250085 21 175 XP_006716140 21 175 XP_005250084 21 175 XP_005250083 21 175 XP_005250082 21 175 NP_036234 17 3301 NP_001036146 17 3301 XP_005263522 17 3301 XP_006710716 17 3301 XP_005263521 17 3301 NP_005202 17 4312 NP_001275634 17 4312 NP_006717 17 4312 NP_056493 17 4312 NP_001186211 17 4312 XP_006719869 17 4312 XP_006719868 17 4312 XP_005266409 17 4312 XP_005266407 17 4312 XP_005266403 17 4312 XP_006719867 17 4312 XP_006719866 17 4312 XP_005266405 17 4312 XP_005266404 17 4312 XP_005263433 17 4312 XP_005263432 17 4312 XP_005263431 17 4312 XP_006714492 17 4312 XP_005263430 17 4312 XP_005263429 17 4312 NP_001191126 17 4312 NP_001866 16 5631 NP_078911 16 5631 NP_004332 16 5631 NP_001116105 16 5631 XP_006717294 16 5631 XP_005252184 16 5631 XP_005252183 16 5631 XP_005264615 16 5631 XP_006712164 16 5631 XP_005264614 16 5631 XP_005264613 16 5631 XP_005264612 16 5631 NP_000515 16 7355 NP_116182 15 9605 NP_001026913 15 9605 NP_001129965 15 9605 NP_001274738 15 9605 NP_612354 15 9605 XP_006713882 15 9605 XP_006713881 15 9605 XP_005271342 15 9605>NP_733751 Length = 4911 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AITDPVMKA 9 AITDP+MKA Sbjct: 3091 AITDPIMKA 3099>XP_006716142 Length = 4927 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AITDPVMKA 9 AITDP+MKA Sbjct: 3108 AITDPIMKA 3116>XP_005250088 Length = 4928 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AITDPVMKA 9 AITDP+MKA Sbjct: 3108 AITDPIMKA 3116>XP_006716141 Length = 4959 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AITDPVMKA 9 AITDP+MKA Sbjct: 3108 AITDPIMKA 3116>XP_005250085 Length = 4979 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AITDPVMKA 9 AITDP+MKA Sbjct: 3108 AITDPIMKA 3116>XP_006716140 Length = 4982 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AITDPVMKA 9 AITDP+MKA Sbjct: 3108 AITDPIMKA 3116>XP_005250084 Length = 4982 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AITDPVMKA 9 AITDP+MKA Sbjct: 3108 AITDPIMKA 3116>XP_005250083 Length = 4982 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AITDPVMKA 9 AITDP+MKA Sbjct: 3107 AITDPIMKA 3115>XP_005250082 Length = 4983 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AITDPVMKA 9 AITDP+MKA Sbjct: 3108 AITDPIMKA 3116>NP_036234 Length = 1566 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ITDPVMK 8 ITDPV+K Sbjct: 217 ITDPVIK 223>NP_001036146 Length = 1566 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ITDPVMK 8 ITDPV+K Sbjct: 217 ITDPVIK 223>XP_005263522 Length = 1524 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ITDPVMK 8 ITDPV+K Sbjct: 175 ITDPVIK 181>XP_006710716 Length = 1566 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ITDPVMK 8 ITDPV+K Sbjct: 217 ITDPVIK 223>XP_005263521 Length = 1566 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ITDPVMK 8 ITDPV+K Sbjct: 217 ITDPVIK 223>NP_005202 Length = 972 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ITDPVMKA 9 +TDPV++A Sbjct: 129 LTDPVLEA 136>NP_001275634 Length = 972 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ITDPVMKA 9 +TDPV++A Sbjct: 129 LTDPVLEA 136>NP_006717 Length = 2863 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AITDPVMK 8 +ITDPV++ Sbjct: 2457 SITDPVLR 2464>NP_056493 Length = 2946 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AITDPVMK 8 +ITDPV++ Sbjct: 2531 SITDPVLR 2538>NP_001186211 Length = 2851 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AITDPVMK 8 +ITDPV++ Sbjct: 2446 SITDPVLR 2453>XP_006719869 Length = 2943 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AITDPVMK 8 +ITDPV++ Sbjct: 2528 SITDPVLR 2535>XP_006719868 Length = 2938 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AITDPVMK 8 +ITDPV++ Sbjct: 2528 SITDPVLR 2535>XP_005266409 Length = 1430 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AITDPVMK 8 +ITDPV++ Sbjct: 994 SITDPVLR 1001>XP_005266407 Length = 2641 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AITDPVMK 8 +ITDPV++ Sbjct: 2205 SITDPVLR 2212>XP_005266403 Length = 2941 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AITDPVMK 8 +ITDPV++ Sbjct: 2531 SITDPVLR 2538>XP_006719867 Length = 2961 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AITDPVMK 8 +ITDPV++ Sbjct: 2525 SITDPVLR 2532>XP_006719866 Length = 2962 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AITDPVMK 8 +ITDPV++ Sbjct: 2531 SITDPVLR 2538>XP_005266405 Length = 2964 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AITDPVMK 8 +ITDPV++ Sbjct: 2528 SITDPVLR 2535>XP_005266404 Length = 2967 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AITDPVMK 8 +ITDPV++ Sbjct: 2531 SITDPVLR 2538>XP_005263433 Length = 2832 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AITDPVMK 8 +ITDPV++ Sbjct: 2421 SITDPVLR 2428>XP_005263432 Length = 2852 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AITDPVMK 8 +ITDPV++ Sbjct: 2446 SITDPVLR 2453>XP_005263431 Length = 2857 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AITDPVMK 8 +ITDPV++ Sbjct: 2446 SITDPVLR 2453>XP_006714492 Length = 2867 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AITDPVMK 8 +ITDPV++ Sbjct: 2457 SITDPVLR 2464>XP_005263430 Length = 2868 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AITDPVMK 8 +ITDPV++ Sbjct: 2457 SITDPVLR 2464>XP_005263429 Length = 2868 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AITDPVMK 8 +ITDPV++ Sbjct: 2457 SITDPVLR 2464>NP_001191126 Length = 739 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AITDPVMK 8 +ITDPV++ Sbjct: 324 SITDPVLR 331>NP_001866 Length = 1500 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AITDPVMK 8 AITDP K Sbjct: 83 AITDPAYK 90>NP_078911 Length = 725 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ITDPVMKA 9 I DP MKA Sbjct: 141 IEDPAMKA 148>NP_004332 Length = 2225 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AITDPVMKA 9 A+TDP KA Sbjct: 39 ALTDPSYKA 47>NP_001116105 Length = 1506 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AITDPVMK 8 AITDP K Sbjct: 89 AITDPAYK 96>XP_006717294 Length = 692 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ITDPVMKA 9 I DP MKA Sbjct: 141 IEDPAMKA 148>XP_005252184 Length = 725 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ITDPVMKA 9 I DP MKA Sbjct: 141 IEDPAMKA 148>XP_005252183 Length = 725 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ITDPVMKA 9 I DP MKA Sbjct: 141 IEDPAMKA 148>XP_005264615 Length = 2162 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AITDPVMKA 9 A+TDP KA Sbjct: 39 ALTDPSYKA 47>XP_006712164 Length = 2179 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AITDPVMKA 9 A+TDP KA Sbjct: 39 ALTDPSYKA 47>XP_005264614 Length = 2191 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AITDPVMKA 9 A+TDP KA Sbjct: 39 ALTDPSYKA 47>XP_005264613 Length = 2208 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AITDPVMKA 9 A+TDP KA Sbjct: 39 ALTDPSYKA 47>XP_005264612 Length = 2242 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AITDPVMKA 9 A+TDP KA Sbjct: 39 ALTDPSYKA 47>NP_000515 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AITDPV 6 AITDP+ Sbjct: 137 AITDPI 142>NP_116182 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AITDPVM 7 AITDP++ Sbjct: 94 AITDPLV 100>NP_001026913 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AITDPVMKA 9 A DP+M+A Sbjct: 247 AANDPLMRA 255>NP_001129965 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AITDPVM 7 AITDP++ Sbjct: 107 AITDPLV 113>NP_001274738 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AITDPVM 7 AITDP++ Sbjct: 57 AITDPLV 63>NP_612354 Length = 1242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AITDPV 6 A+TDPV Sbjct: 634 ALTDPV 639>XP_006713882 Length = 1242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AITDPV 6 A+TDPV Sbjct: 634 ALTDPV 639>XP_006713881 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AITDPV 6 A+TDPV Sbjct: 416 ALTDPV 421>XP_005271342 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AITDPVM 7 AITDP++ Sbjct: 92 AITDPLV 98Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.126 0.344 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 602,069 Number of extensions: 650 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |