Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_056364 18 1482 XP_005267570 18 1482 XP_006720171 18 1482 XP_005267569 18 1482 XP_005267568 18 1482 XP_006720170 18 1482 XP_006720169 18 1482 NP_006209 18 1935 XP_006713721 18 1935 NP_060362 17 4312 XP_005246736 17 4312 XP_005246735 17 4312 XP_005246734 17 4312 XP_005246733 17 4312 NP_003165 16 5631 NP_068506 16 5631 XP_006717559 16 5631 XP_006717558 16 5631 XP_006717557 16 5631 XP_006717556 16 5631 XP_005252630 16 5631 XP_005252629 16 5631 XP_005252628 16 5631 XP_005252627 16 5631 XP_005252626 16 5631 XP_005252625 16 5631 XP_005252624 16 5631 XP_005252623 16 5631 XP_005252622 16 5631 XP_006717555 16 5631 XP_005252621 16 5631 NP_001139280 16 7355 NP_000623 16 7355 NP_005306 16 7355 NP_055945 15 9605>NP_056364 Length = 1163 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 A+STRDRL Sbjct: 652 ALSTRDRL 659>XP_005267570 Length = 1219 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 A+STRDRL Sbjct: 708 ALSTRDRL 715>XP_006720171 Length = 1240 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 A+STRDRL Sbjct: 729 ALSTRDRL 736>XP_005267569 Length = 1340 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 A+STRDRL Sbjct: 829 ALSTRDRL 836>XP_005267568 Length = 1340 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 A+STRDRL Sbjct: 829 ALSTRDRL 836>XP_006720170 Length = 1354 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 A+STRDRL Sbjct: 843 ALSTRDRL 850>XP_006720169 Length = 1361 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 A+STRDRL Sbjct: 850 ALSTRDRL 857>NP_006209 Length = 1068 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AISTRDRLS 9 AISTRD LS Sbjct: 533 AISTRDPLS 541>XP_006713721 Length = 1068 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AISTRDRLS 9 AISTRD LS Sbjct: 533 AISTRDPLS 541>NP_060362 Length = 930 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AISTRDRL 8 AIS RDRL Sbjct: 471 AISERDRL 478>XP_005246736 Length = 976 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AISTRDRL 8 AIS RDRL Sbjct: 513 AISERDRL 520>XP_005246735 Length = 976 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AISTRDRL 8 AIS RDRL Sbjct: 513 AISERDRL 520>XP_005246734 Length = 934 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AISTRDRL 8 AIS RDRL Sbjct: 471 AISERDRL 478>XP_005246733 Length = 972 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AISTRDRL 8 AIS RDRL Sbjct: 513 AISERDRL 520>NP_003165 Length = 1788 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 AISTR+R+ Sbjct: 406 AISTRNRI 413>NP_068506 Length = 2214 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 AISTR+R+ Sbjct: 832 AISTRNRI 839>XP_006717559 Length = 1866 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 AISTR+R+ Sbjct: 484 AISTRNRI 491>XP_006717558 Length = 1908 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 AISTR+R+ Sbjct: 484 AISTRNRI 491>XP_006717557 Length = 1940 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 AISTR+R+ Sbjct: 516 AISTRNRI 523>XP_006717556 Length = 2024 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 AISTR+R+ Sbjct: 600 AISTRNRI 607>XP_005252630 Length = 2256 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 AISTR+R+ Sbjct: 832 AISTRNRI 839>XP_005252629 Length = 2256 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 AISTR+R+ Sbjct: 832 AISTRNRI 839>XP_005252628 Length = 2256 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 AISTR+R+ Sbjct: 832 AISTRNRI 839>XP_005252627 Length = 2256 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 AISTR+R+ Sbjct: 832 AISTRNRI 839>XP_005252626 Length = 2260 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 AISTR+R+ Sbjct: 878 AISTRNRI 885>XP_005252625 Length = 2277 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 AISTR+R+ Sbjct: 853 AISTRNRI 860>XP_005252624 Length = 2292 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 AISTR+R+ Sbjct: 910 AISTRNRI 917>XP_005252623 Length = 2302 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 AISTR+R+ Sbjct: 878 AISTRNRI 885>XP_005252622 Length = 2308 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 AISTR+R+ Sbjct: 910 AISTRNRI 917>XP_006717555 Length = 2328 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 AISTR+R+ Sbjct: 904 AISTRNRI 911>XP_005252621 Length = 2334 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AISTRDRL 8 AISTR+R+ Sbjct: 910 AISTRNRI 917>NP_001139280 Length = 1153 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 STRDRL 8 STRDRL Sbjct: 661 STRDRL 666>NP_000623 Length = 1152 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 STRDRL 8 STRDRL Sbjct: 660 STRDRL 665>NP_005306 Length = 205 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ISTRDRLS 9 +STR+RL+ Sbjct: 153 VSTRERLA 160>NP_055945 Length = 1266 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AISTRDRLS 9 +ISTR+R++ Sbjct: 371 SISTRNRMT 379Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.124 0.300 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 370,345 Number of extensions: 549 Number of successful extensions: 35 Number of sequences better than 10000.0: 35 Number of HSP's gapped: 35 Number of HSP's successfully gapped: 35 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |