Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 18 1482 NP_434701 18 1482 NP_434700 18 1482 NP_055792 16 7355 NP_001158287 16 7355 NP_001158286 16 7355 NP_001158288 16 7355 NP_001158289 16 7355 XP_005267475 16 7355 XP_005267473 16 7355 XP_005267472 16 7355 NP_004818 15 9605 NP_001244315 15 9605 NP_001276976 15 9605 NP_002843 15 9605 NP_001276975 15 9605 NP_056261 15 9605 NP_001165349 15 9605 NP_001165350 15 9605 NP_005360 15 9605 NP_001165347 15 9605 NP_079143 15 9605 XP_006724820 15 9605 XP_005262471 15 9605 XP_005262470 15 9605 XP_006724141 15 9605 XP_006714564 15 9605 XP_006714563 15 9605 XP_005248434 15 9605 XP_005248433 15 9605 XP_005263413 15 9605 XP_005263412 15 9605 XP_005263411 15 9605 XP_006711822 15 9605 XP_006711821 15 9605 NP_001165348 15 9605 NP_001093325 15 9605>NP_004351 Length = 882 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AISTRAEL 8 AISTRAEL Sbjct: 541 AISTRAEL 548>NP_434701 Length = 492 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AISTRAELH 9 AI+TR ELH Sbjct: 360 AIATREELH 368>NP_434700 Length = 536 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AISTRAELH 9 AI+TR ELH Sbjct: 360 AIATREELH 368>NP_055792 Length = 1341 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 A++TR LH Sbjct: 1062 AVATRTALH 1070>NP_001158287 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 A++TR LH Sbjct: 1022 AVATRTALH 1030>NP_001158286 Length = 1328 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 A++TR LH Sbjct: 1049 AVATRTALH 1057>NP_001158288 Length = 614 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 A++TR LH Sbjct: 335 AVATRTALH 343>NP_001158289 Length = 583 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 A++TR LH Sbjct: 304 AVATRTALH 312>XP_005267475 Length = 583 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 A++TR LH Sbjct: 304 AVATRTALH 312>XP_005267473 Length = 1329 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 A++TR LH Sbjct: 1050 AVATRTALH 1058>XP_005267472 Length = 1340 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 A++TR LH Sbjct: 1061 AVATRTALH 1069>NP_004818 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRAELH 9 T+AELH Sbjct: 345 TKAELH 350>NP_001244315 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRAELH 9 T+AELH Sbjct: 345 TKAELH 350>NP_001276976 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRAELH 9 T+AELH Sbjct: 297 TKAELH 302>NP_002843 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRAELH 9 TRA+LH Sbjct: 159 TRADLH 164>NP_001276975 Length = 1300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRAELH 9 T+AELH Sbjct: 134 TKAELH 139>NP_056261 Length = 2275 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 AIS +ELH Sbjct: 1172 AISRASELH 1180>NP_001165349 Length = 860 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 A+S+R E H Sbjct: 171 AVSSRLECH 179>NP_001165350 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 A+S+R E H Sbjct: 171 AVSSRLECH 179>NP_005360 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 A+S+R E H Sbjct: 171 AVSSRLECH 179>NP_001165347 Length = 1001 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 A+S+R E H Sbjct: 231 AVSSRLECH 239>NP_079143 Length = 1822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRAELH 9 T+AELH Sbjct: 1101 TKAELH 1106>XP_006724820 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 A+S+R E H Sbjct: 132 AVSSRLECH 140>XP_005262471 Length = 1005 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 A+S+R E H Sbjct: 316 AVSSRLECH 324>XP_005262470 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 A+S+R E H Sbjct: 274 AVSSRLECH 282>XP_006724141 Length = 1426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRAELH 9 T+AELH Sbjct: 259 TKAELH 264>XP_006714564 Length = 1537 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRAELH 9 T+AELH Sbjct: 1101 TKAELH 1106>XP_006714563 Length = 1766 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRAELH 9 T+AELH Sbjct: 1044 TKAELH 1049>XP_005248434 Length = 1818 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRAELH 9 T+AELH Sbjct: 1096 TKAELH 1101>XP_005248433 Length = 1823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRAELH 9 T+AELH Sbjct: 1101 TKAELH 1106>XP_005263413 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRAELH 9 T+AELH Sbjct: 343 TKAELH 348>XP_005263412 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRAELH 9 T+AELH Sbjct: 345 TKAELH 350>XP_005263411 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TRAELH 9 T+AELH Sbjct: 345 TKAELH 350>XP_006711822 Length = 2266 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 AIS +ELH Sbjct: 1163 AISRASELH 1171>XP_006711821 Length = 2301 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 AIS +ELH Sbjct: 1198 AISRASELH 1206>NP_001165348 Length = 821 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 A+S+R E H Sbjct: 132 AVSSRLECH 140>NP_001093325 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AISTRAELH 9 A+S+R E H Sbjct: 231 AVSSRLECH 239Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.120 0.309 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 363,512 Number of extensions: 448 Number of successful extensions: 37 Number of sequences better than 10000.0: 37 Number of HSP's gapped: 37 Number of HSP's successfully gapped: 37 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |