Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001121619 19 869 NP_000258 19 869 NP_001035957 19 869 XP_006721991 19 869 XP_006721990 19 869 XP_006721989 19 869 XP_005258041 19 869 XP_006721988 19 869 XP_006721987 19 869 XP_006721986 19 869 XP_005258040 19 869 XP_006721985 19 869 NP_001243793 18 1135 NP_001243794 18 1135 NP_055602 18 1135 NP_001004754 18 1482 NP_055568 17 4312 NP_056509 17 4312 XP_005271906 17 4312 XP_006718144 17 4312 XP_005271905 17 4312 XP_005271904 17 4312 XP_005271903 17 4312 XP_005250038 17 4312 XP_005250037 17 4312 NP_150253 16 5631 NP_150242 16 5631 NP_001229760 16 5631 NP_001153797 16 5631 NP_056150 16 7355 NP_036234 16 7355 NP_001036147 16 7355 NP_001036146 16 7355 NP_001009921 16 7355 XP_006719370 16 7355 XP_006719369 16 7355 XP_006719368 16 7355 XP_006713619 16 7355 XP_005247308 16 7355 XP_006710717 16 7355 XP_005263523 16 7355 XP_005263522 16 7355 XP_006710716 16 7355 XP_005263521 16 7355 NP_056118 16 7355 NP_057520 15 9605 NP_001008563 15 9605 NP_006667 15 9605 NP_001103773 15 9605 NP_005782 15 9605 NP_060587 15 9605 NP_938056 15 9605 NP_001243543 15 9605 NP_938055 15 9605 NP_001243542 15 9605 NP_055616 15 9605 NP_872395 15 9605 NP_570126 15 9605 XP_005260478 15 9605 XP_005260766 15 9605 XP_005260765 15 9605 XP_005255201 15 9605 XP_006720914 15 9605 XP_005270020 15 9605 XP_005270019 15 9605 XP_005251723 15 9605 XP_006717001 15 9605 XP_005251722 15 9605 XP_005247433 15 9605 XP_005273329 15 9605 NP_631909 15 9605>NP_001121619 Length = 593 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AIRMAPSL 8 AIRMAPSL Sbjct: 459 AIRMAPSL 466>NP_000258 Length = 2818 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AIRMAPSL 8 AIRMAPSL Sbjct: 459 AIRMAPSL 466>NP_001035957 Length = 2839 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AIRMAPSL 8 AIRMAPSL Sbjct: 459 AIRMAPSL 466>XP_006721991 Length = 1632 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AIRMAPSL 8 AIRMAPSL Sbjct: 469 AIRMAPSL 476>XP_006721990 Length = 2823 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AIRMAPSL 8 AIRMAPSL Sbjct: 469 AIRMAPSL 476>XP_006721989 Length = 2823 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AIRMAPSL 8 AIRMAPSL Sbjct: 469 AIRMAPSL 476>XP_005258041 Length = 2836 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AIRMAPSL 8 AIRMAPSL Sbjct: 459 AIRMAPSL 466>XP_006721988 Length = 2846 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AIRMAPSL 8 AIRMAPSL Sbjct: 469 AIRMAPSL 476>XP_006721987 Length = 2849 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AIRMAPSL 8 AIRMAPSL Sbjct: 469 AIRMAPSL 476>XP_006721986 Length = 2854 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AIRMAPSL 8 AIRMAPSL Sbjct: 456 AIRMAPSL 463>XP_005258040 Length = 2857 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AIRMAPSL 8 AIRMAPSL Sbjct: 459 AIRMAPSL 466>XP_006721985 Length = 2867 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AIRMAPSL 8 AIRMAPSL Sbjct: 469 AIRMAPSL 476>NP_001243793 Length = 970 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IRMAPSLH 9 IR APSLH Sbjct: 189 IRQAPSLH 196>NP_001243794 Length = 900 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IRMAPSLH 9 IR APSLH Sbjct: 119 IRQAPSLH 126>NP_055602 Length = 913 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IRMAPSLH 9 IR APSLH Sbjct: 132 IRQAPSLH 139>NP_001004754 Length = 312 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AIRMAPSLH 9 A+R+ PSLH Sbjct: 48 AVRVEPSLH 56>NP_055568 Length = 1282 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AIRMAPSLH 9 A+RMA S H Sbjct: 50 AVRMARSFH 58>NP_056509 Length = 831 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RMAPSLH 9 R+APS+H Sbjct: 515 RLAPSVH 521>XP_005271906 Length = 879 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AIRMAPSLH 9 A+RMA S H Sbjct: 50 AVRMARSFH 58>XP_006718144 Length = 886 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AIRMAPSLH 9 A+RMA S H Sbjct: 50 AVRMARSFH 58>XP_005271905 Length = 1219 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AIRMAPSLH 9 A+RMA S H Sbjct: 50 AVRMARSFH 58>XP_005271904 Length = 1219 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AIRMAPSLH 9 A+RMA S H Sbjct: 50 AVRMARSFH 58>XP_005271903 Length = 1282 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AIRMAPSLH 9 A+RMA S H Sbjct: 50 AVRMARSFH 58>XP_005250038 Length = 831 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RMAPSLH 9 R+APS+H Sbjct: 515 RLAPSVH 521>XP_005250037 Length = 875 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RMAPSLH 9 R+APS+H Sbjct: 559 RLAPSVH 565>NP_150253 Length = 781 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AIRMAPSLH 9 A+R+ P LH Sbjct: 623 ALRLHPQLH 631>NP_150242 Length = 829 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AIRMAPSLH 9 A+R+ P LH Sbjct: 671 ALRLHPQLH 679>NP_001229760 Length = 88 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IRMAPSLH 9 +RM P LH Sbjct: 26 LRMGPPLH 33>NP_001153797 Length = 317 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IRMAPSLH 9 I +APSLH Sbjct: 49 IWLAPSLH 56>NP_056150 Length = 2210 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MAPSLH 9 +APSLH Sbjct: 803 LAPSLH 808>NP_036234 Length = 1566 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IRMAPSLH 9 I+ AP+LH Sbjct: 800 IQQAPALH 807>NP_001036147 Length = 1012 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IRMAPSLH 9 I+ AP+LH Sbjct: 246 IQQAPALH 253>NP_001036146 Length = 1566 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IRMAPSLH 9 I+ AP+LH Sbjct: 800 IQQAPALH 807>NP_001009921 Length = 1428 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IRMAPSLH 9 ++M+PS H Sbjct: 1335 VKMSPSYH 1342>XP_006719370 Length = 2076 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MAPSLH 9 +APSLH Sbjct: 669 LAPSLH 674>XP_006719369 Length = 2200 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MAPSLH 9 +APSLH Sbjct: 793 LAPSLH 798>XP_006719368 Length = 2209 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MAPSLH 9 +APSLH Sbjct: 803 LAPSLH 808>XP_006713619 Length = 856 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IRMAPSLH 9 ++M+PS H Sbjct: 763 VKMSPSYH 770>XP_005247308 Length = 1428 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IRMAPSLH 9 ++M+PS H Sbjct: 1335 VKMSPSYH 1342>XP_006710717 Length = 1171 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IRMAPSLH 9 I+ AP+LH Sbjct: 405 IQQAPALH 412>XP_005263523 Length = 1298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IRMAPSLH 9 I+ AP+LH Sbjct: 532 IQQAPALH 539>XP_005263522 Length = 1524 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IRMAPSLH 9 I+ AP+LH Sbjct: 758 IQQAPALH 765>XP_006710716 Length = 1566 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IRMAPSLH 9 I+ AP+LH Sbjct: 800 IQQAPALH 807>XP_005263521 Length = 1566 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IRMAPSLH 9 I+ AP+LH Sbjct: 800 IQQAPALH 807>NP_056118 Length = 1426 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IRMAPSLH 9 ++M+PS H Sbjct: 1333 VKMSPSYH 1340>NP_057520 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 IRMAPSLH 9 + M+P LH Sbjct: 587 VHMSPQLH 594>NP_001008563 Length = 914 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IRMAPS 7 +RMAPS Sbjct: 415 VRMAPS 420>NP_006667 Length = 914 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IRMAPS 7 +RMAPS Sbjct: 415 VRMAPS 420>NP_001103773 Length = 914 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IRMAPS 7 +RMAPS Sbjct: 415 VRMAPS 420>NP_005782 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AIRMAP 6 A+RMAP Sbjct: 410 AVRMAP 415>NP_060587 Length = 1224 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AIRMAPSL 8 AIRM P L Sbjct: 469 AIRMCPPL 476>NP_938056 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AIRMAPSLH 9 AIR PSL+ Sbjct: 242 AIRRRPSLY 250>NP_001243543 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AIRMAPSLH 9 AIR PSL+ Sbjct: 268 AIRRRPSLY 276>NP_938055 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AIRMAPSLH 9 AIR PSL+ Sbjct: 227 AIRRRPSLY 235>NP_001243542 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AIRMAPSLH 9 AIR PSL+ Sbjct: 242 AIRRRPSLY 250>NP_055616 Length = 2137 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AIRMAPSLH 9 AIRM+ LH Sbjct: 1690 AIRMSLKLH 1698>NP_872395 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AIRMAPSLH 9 AIR PSL+ Sbjct: 257 AIRRRPSLY 265>NP_570126 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AIRMAPSLH 9 AIR PSL+ Sbjct: 242 AIRRRPSLY 250>XP_005260478 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 IRMAPSLH 9 + M+P LH Sbjct: 184 VHMSPQLH 191>XP_005260766 Length = 250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 RMAPSLH 9 RM P LH Sbjct: 227 RMLPGLH 233>XP_005260765 Length = 348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 RMAPSLH 9 RM P LH Sbjct: 325 RMLPGLH 331>XP_005255201 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 RMAPSLH 9 RM PS H Sbjct: 164 RMVPSAH 170>XP_006720914 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 RMAPSLH 9 RM PS H Sbjct: 325 RMVPSAH 331>XP_005270020 Length = 965 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AIRMAPSL 8 AIRM P L Sbjct: 210 AIRMCPPL 217>XP_005270019 Length = 965 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AIRMAPSL 8 AIRM P L Sbjct: 210 AIRMCPPL 217>XP_005251723 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IRMAPS 7 +RMAPS Sbjct: 176 VRMAPS 181>XP_006717001 Length = 914 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IRMAPS 7 +RMAPS Sbjct: 415 VRMAPS 420>XP_005251722 Length = 914 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IRMAPS 7 +RMAPS Sbjct: 415 VRMAPS 420>XP_005247433 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AIRMAPSLH 9 AIR PSL+ Sbjct: 160 AIRRRPSLY 168>XP_005273329 Length = 1934 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AIRMAPSLH 9 AIRM+ LH Sbjct: 1487 AIRMSLKLH 1495>NP_631909 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 RMAPSLH 9 RM PS H Sbjct: 302 RMVPSAH 308Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.131 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 694,207 Number of extensions: 942 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |