Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005912 18 1935 XP_005248577 18 1935 XP_005248576 18 1935 NP_001264671 17 2528 NP_063938 17 2528 XP_005264490 17 2528 NP_005674 16 5631 NP_690875 16 5631 NP_997011 16 5631 XP_005247009 16 5631 NP_073751 16 7355 NP_891549 16 7355 NP_055529 16 7355 NP_009149 16 7355 XP_005258190 16 7355 XP_005258189 16 7355 XP_006722402 16 7355 XP_006721055 16 7355 XP_006721054 16 7355 XP_006721053 16 7355 XP_006721052 16 7355 NP_001167579 16 7355 NP_055213 15 9605 XP_006713649 15 9605 XP_005247417 15 9605>NP_005912 Length = 1512 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AIQLVVEDT 9 AIQL VEDT Sbjct: 868 AIQLGVEDT 876>XP_005248577 Length = 1349 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AIQLVVEDT 9 AIQL VEDT Sbjct: 705 AIQLGVEDT 713>XP_005248576 Length = 1375 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AIQLVVEDT 9 AIQL VEDT Sbjct: 731 AIQLGVEDT 739>NP_001264671 Length = 437 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IQLVVEDT 9 IQLV++DT Sbjct: 86 IQLVIQDT 93>NP_063938 Length = 512 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IQLVVEDT 9 IQLV++DT Sbjct: 161 IQLVIQDT 168>XP_005264490 Length = 454 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IQLVVEDT 9 IQLV++DT Sbjct: 103 IQLVIQDT 110>NP_005674 Length = 319 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IQLVVEDT 9 +QLV++DT Sbjct: 307 VQLVLQDT 314>NP_690875 Length = 511 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IQLVVEDT 9 IQLV EDT Sbjct: 339 IQLVWEDT 346>NP_997011 Length = 486 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IQLVVEDT 9 IQLV EDT Sbjct: 339 IQLVWEDT 346>XP_005247009 Length = 319 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IQLVVEDT 9 +QLV++DT Sbjct: 307 VQLVLQDT 314>NP_073751 Length = 472 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IQLVVEDT 9 +QLV EDT Sbjct: 219 LQLVEEDT 226>NP_891549 Length = 712 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IQLVVEDT 9 +QL VEDT Sbjct: 334 LQLSVEDT 341>NP_055529 Length = 1462 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIQLVVED 8 A+QL+ ED Sbjct: 1109 ALQLIAED 1116>NP_009149 Length = 664 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IQLVVEDT 9 +QL++EDT Sbjct: 221 LQLLMEDT 228>XP_005258190 Length = 325 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IQLVVEDT 9 +QLV EDT Sbjct: 72 LQLVEEDT 79>XP_005258189 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IQLVVEDT 9 +QLV EDT Sbjct: 219 LQLVEEDT 226>XP_006722402 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IQLVVEDT 9 +QLV EDT Sbjct: 219 LQLVEEDT 226>XP_006721055 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIQLVVED 8 A+QL+ ED Sbjct: 320 ALQLIAED 327>XP_006721054 Length = 1462 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIQLVVED 8 A+QL+ ED Sbjct: 1109 ALQLIAED 1116>XP_006721053 Length = 1462 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIQLVVED 8 A+QL+ ED Sbjct: 1109 ALQLIAED 1116>XP_006721052 Length = 1462 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIQLVVED 8 A+QL+ ED Sbjct: 1109 ALQLIAED 1116>NP_001167579 Length = 979 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IQLVVED 8 IQ++VED Sbjct: 415 IQMIVED 421>NP_055213 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IQLVVED 8 IQL+V+D Sbjct: 244 IQLIVQD 250>XP_006713649 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IQLVVED 8 IQL+V+D Sbjct: 220 IQLIVQD 226>XP_005247417 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IQLVVED 8 IQL+V+D Sbjct: 244 IQLIVQD 250Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.132 0.315 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 420,944 Number of extensions: 701 Number of successful extensions: 25 Number of sequences better than 10000.0: 25 Number of HSP's gapped: 25 Number of HSP's successfully gapped: 25 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |