Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 19 869 NP_858045 19 869 NP_006525 19 869 NP_001167559 19 869 NP_001128472 17 4312 NP_002261 17 4312 NP_694858 17 4312 NP_001128471 17 4312 NP_006823 17 4312 NP_001129668 17 4312 NP_001129667 17 4312 NP_038461 17 4312 XP_005267342 17 4312 XP_006720073 17 4312 XP_006720072 17 4312 XP_006720071 17 4312 XP_005248557 17 4312 XP_005248558 17 4312 NP_004303 16 5631 NP_079350 16 5631 XP_006724714 16 5631 XP_006714380 16 5631 XP_006714379 16 5631 XP_006714378 16 5631 XP_006714377 16 5631 NP_000177 16 7355 NP_002104 16 7355 NP_078966 16 7355 NP_005657 16 7355 NP_001135451 16 7355 NP_005648 16 7355 NP_001135452 16 7355 NP_055811 16 7355 XP_006720729 16 7355 XP_005254692 16 7355 XP_005254691 16 7355 XP_005247296 16 7355 XP_006713604 16 7355 XP_005247295 16 7355 XP_005245170 16 7355 XP_006711348 16 7355 XP_006711347 16 7355 XP_006711345 16 7355 NP_001124432 16 7355 NP_001123473 15 9605 NP_001123474 15 9605 NP_057311 15 9605 NP_055098 15 9605 NP_001093247 15 9605 NP_542376 15 9605 NP_004361 15 9605 NP_001230658 15 9605 NP_872413 15 9605 NP_001269680 15 9605 XP_005262184 15 9605 XP_005268677 15 9605 XP_006719281 15 9605 XP_006719280 15 9605 XP_005268675 15 9605 XP_005268674 15 9605 XP_006715397 15 9605 XP_005247199 15 9605 XP_005245308 15 9605 XP_006711439 15 9605 XP_006711438 15 9605 XP_006711437 15 9605 NP_001164024 15 9605 NP_443129 15 9605>NP_001167558 Length = 1423 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AILGDLTS 8 AILGDLTS Sbjct: 802 AILGDLTS 809>NP_858045 Length = 1424 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AILGDLTS 8 AILGDLTS Sbjct: 802 AILGDLTS 809>NP_006525 Length = 1420 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AILGDLTS 8 AILGDLTS Sbjct: 802 AILGDLTS 809>NP_001167559 Length = 1415 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AILGDLTS 8 AILGDLTS Sbjct: 812 AILGDLTS 819>NP_001128472 Length = 633 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ILGDLTS 8 ILGD+TS Sbjct: 365 ILGDITS 371>NP_002261 Length = 898 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AILGDLT 7 A+LGDLT Sbjct: 697 ALLGDLT 703>NP_694858 Length = 890 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AILGDLT 7 A+LGDLT Sbjct: 689 ALLGDLT 695>NP_001128471 Length = 687 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ILGDLTS 8 ILGD+TS Sbjct: 365 ILGDITS 371>NP_006823 Length = 680 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ILGDLTS 8 ILGD+TS Sbjct: 365 ILGDITS 371>NP_001129668 Length = 897 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AILGDLT 7 A+LGDLT Sbjct: 686 ALLGDLT 692>NP_001129667 Length = 887 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AILGDLT 7 A+LGDLT Sbjct: 686 ALLGDLT 692>NP_038461 Length = 887 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AILGDLT 7 A+LGDLT Sbjct: 686 ALLGDLT 692>XP_005267342 Length = 691 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ILGDLTS 8 ILGD+TS Sbjct: 376 ILGDITS 382>XP_006720073 Length = 695 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ILGDLTS 8 ILGD+TS Sbjct: 365 ILGDITS 371>XP_006720072 Length = 698 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ILGDLTS 8 ILGD+TS Sbjct: 376 ILGDITS 382>XP_006720071 Length = 706 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ILGDLTS 8 ILGD+TS Sbjct: 376 ILGDITS 382>XP_005248557 Length = 890 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AILGDLT 7 A+LGDLT Sbjct: 689 ALLGDLT 695>XP_005248558 Length = 866 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AILGDLT 7 A+LGDLT Sbjct: 697 ALLGDLT 703>NP_004303 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ILGDLTS 8 ILGDLT+ Sbjct: 331 ILGDLTA 337>NP_079350 Length = 4012 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AILGDLTS 8 A+LGD+T+ Sbjct: 3140 AVLGDVTT 3147>XP_006724714 Length = 343 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ILGDLTS 8 ILGDLT+ Sbjct: 286 ILGDLTA 292>XP_006714380 Length = 3897 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AILGDLTS 8 A+LGD+T+ Sbjct: 3025 AVLGDVTT 3032>XP_006714379 Length = 3936 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AILGDLTS 8 A+LGD+T+ Sbjct: 3064 AVLGDVTT 3071>XP_006714378 Length = 3965 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AILGDLTS 8 A+LGD+T+ Sbjct: 3093 AVLGDVTT 3100>XP_006714377 Length = 4010 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AILGDLTS 8 A+LGD+T+ Sbjct: 3138 AVLGDVTT 3145>NP_000177 Length = 1231 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GDLTSF 9 GD+TSF Sbjct: 1118 GDITSF 1123>NP_002104 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GDLTSF 9 GD+TSF Sbjct: 217 GDITSF 222>NP_078966 Length = 14507 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILGDLTS 8 I+GD+TS Sbjct: 4280 IMGDITS 4286>NP_005657 Length = 270 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GDLTSF 9 GD+TSF Sbjct: 158 GDITSF 163>NP_001135451 Length = 1975 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LGDLTSF 9 LGD++SF Sbjct: 1304 LGDISSF 1310>NP_005648 Length = 1972 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LGDLTSF 9 LGD++SF Sbjct: 1299 LGDISSF 1305>NP_001135452 Length = 1977 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LGDLTSF 9 LGD++SF Sbjct: 1304 LGDISSF 1310>NP_055811 Length = 1655 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGDLTS 8 LGDLTS Sbjct: 1457 LGDLTS 1462>XP_006720729 Length = 940 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LGDLTSF 9 LGD++SF Sbjct: 267 LGDISSF 273>XP_005254692 Length = 1017 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LGDLTSF 9 LGD++SF Sbjct: 344 LGDISSF 350>XP_005254691 Length = 1972 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LGDLTSF 9 LGD++SF Sbjct: 1299 LGDISSF 1305>XP_005247296 Length = 1673 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGDLTS 8 LGDLTS Sbjct: 1475 LGDLTS 1480>XP_006713604 Length = 1685 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGDLTS 8 LGDLTS Sbjct: 1487 LGDLTS 1492>XP_005247295 Length = 1705 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGDLTS 8 LGDLTS Sbjct: 1507 LGDLTS 1512>XP_005245170 Length = 205 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GDLTSF 9 GD+TSF Sbjct: 93 GDITSF 98>XP_006711348 Length = 216 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GDLTSF 9 GD+TSF Sbjct: 104 GDITSF 109>XP_006711347 Length = 276 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GDLTSF 9 GD+TSF Sbjct: 163 GDITSF 168>XP_006711345 Length = 1173 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GDLTSF 9 GD+TSF Sbjct: 1060 GDITSF 1065>NP_001124432 Length = 1693 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGDLTS 8 LGDLTS Sbjct: 1495 LGDLTS 1500>NP_001123473 Length = 133 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GDLTSF 9 GDLT+F Sbjct: 54 GDLTNF 59>NP_001123474 Length = 135 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GDLTSF 9 GDLT+F Sbjct: 54 GDLTNF 59>NP_057311 Length = 1405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILGDLTS 8 +LGDL+S Sbjct: 849 VLGDLSS 855>NP_055098 Length = 1254 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILGDLTS 8 +LGDL+S Sbjct: 698 VLGDLSS 704>NP_001093247 Length = 118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GDLTSF 9 GDLT+F Sbjct: 54 GDLTNF 59>NP_542376 Length = 1899 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AILGDLTS 8 A+L DLTS Sbjct: 383 AVLHDLTS 390>NP_004361 Length = 3063 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AILGDLTS 8 A+L DLTS Sbjct: 1547 AVLHDLTS 1554>NP_001230658 Length = 72 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GDLTSF 9 GDLT+F Sbjct: 54 GDLTNF 59>NP_872413 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ILGDLTSF 9 ++G+LT+F Sbjct: 197 VIGNLTNF 204>NP_001269680 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILGDLTS 8 +LGDL+S Sbjct: 135 VLGDLSS 141>XP_005262184 Length = 449 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ILGDLTSF 9 ++G+LT+F Sbjct: 259 VIGNLTNF 266>XP_005268677 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AILGDLTS 8 ++LGDL+S Sbjct: 743 SLLGDLSS 750>XP_006719281 Length = 1004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AILGDLTS 8 ++LGDL+S Sbjct: 743 SLLGDLSS 750>XP_006719280 Length = 1004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AILGDLTS 8 ++LGDL+S Sbjct: 743 SLLGDLSS 750>XP_005268675 Length = 1004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AILGDLTS 8 ++LGDL+S Sbjct: 743 SLLGDLSS 750>XP_005268674 Length = 1004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AILGDLTS 8 ++LGDL+S Sbjct: 743 SLLGDLSS 750>XP_006715397 Length = 2972 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AILGDLTS 8 A+L DLTS Sbjct: 1456 AVLHDLTS 1463>XP_005247199 Length = 89 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GDLTSF 9 GDLT+F Sbjct: 54 GDLTNF 59>XP_005245308 Length = 1092 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILGDLTS 8 +LGDL+S Sbjct: 698 VLGDLSS 704>XP_006711439 Length = 1210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILGDLTS 8 +LGDL+S Sbjct: 654 VLGDLSS 660>XP_006711438 Length = 1217 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILGDLTS 8 +LGDL+S Sbjct: 661 VLGDLSS 667>XP_006711437 Length = 1247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILGDLTS 8 +LGDL+S Sbjct: 691 VLGDLSS 697>NP_001164024 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ILGDLTSF 9 ++G+LT+F Sbjct: 233 VIGNLTNF 240>NP_443129 Length = 1003 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AILGDLTS 8 ++LGDL+S Sbjct: 743 SLLGDLSS 750Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.146 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 455,876 Number of extensions: 670 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |