Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 19 869 NP_036462 19 869 NP_001243397 19 869 XP_005269721 19 869 XP_006726853 18 1935 XP_006723596 18 1935 XP_006710111 18 1935 XP_005276813 17 2528 XP_005248455 17 2528 NP_001790 17 2528 NP_079366 17 3301 XP_005257601 17 3301 XP_005257599 17 3301 XP_005257600 17 3301 NP_056507 17 4312 NP_758441 17 4312 NP_055444 16 5631 NP_653191 16 5631 NP_001258652 16 5631 NP_110420 16 5631 XP_006725174 16 5631 XP_006725173 16 5631 XP_006725172 16 5631 XP_006725171 16 5631 XP_006725170 16 5631 XP_006725169 16 5631 XP_006725168 16 5631 XP_006725167 16 5631 XP_005266099 16 5631 XP_006716304 16 5631 XP_006716303 16 5631 XP_006716302 16 5631 XP_005266098 16 5631 XP_005266097 16 5631 XP_005266096 16 5631 XP_006716301 16 5631 XP_006714860 16 5631 XP_006714859 16 5631 XP_005268570 16 5631 NP_003048 16 7355 NP_694857 16 7355 NP_001070650 16 7355 NP_036550 16 7355 NP_003260 16 7355 NP_001273031 16 7355 XP_005257253 16 7355 XP_005257252 16 7355 XP_005267162 16 7355 XP_005267161 16 7355 XP_006715615 16 7355 XP_005267160 16 7355 XP_005267159 16 7355 NP_001230913 15 9605 NP_068810 15 9605 NP_001138610 15 9605 NP_001230914 15 9605 NP_001009 15 9605 NP_000982 15 9605 NP_689497 15 9605>NP_001243398 Length = 1781 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 AIKRKR FV Sbjct: 828 AIKRKRPFV 836>NP_036462 Length = 2073 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 AIKRKR FV Sbjct: 1120 AIKRKRPFV 1128>NP_001243397 Length = 1890 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 AIKRKR FV Sbjct: 937 AIKRKRPFV 945>XP_005269721 Length = 2073 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 AIKRKR FV Sbjct: 1120 AIKRKRPFV 1128>XP_006726853 Length = 707 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 AIKRKRTFV 9 ++KR+RTFV Sbjct: 221 SLKRQRTFV 229>XP_006723596 Length = 707 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 AIKRKRTFV 9 ++KR+RTFV Sbjct: 221 SLKRQRTFV 229>XP_006710111 Length = 566 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 AIKRKRTFV 9 ++KR+RTFV Sbjct: 80 SLKRQRTFV 88>XP_005276813 Length = 289 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 AIKRKRT 7 AIKRKRT Sbjct: 269 AIKRKRT 275>XP_005248455 Length = 289 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 AIKRKRT 7 AIKRKRT Sbjct: 269 AIKRKRT 275>NP_001790 Length = 346 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 AIKRKRT 7 AIKRKRT Sbjct: 326 AIKRKRT 332>NP_079366 Length = 1123 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KRKRTFV 9 KRK+TFV Sbjct: 811 KRKKTFV 817>XP_005257601 Length = 1123 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KRKRTFV 9 KRK+TFV Sbjct: 811 KRKKTFV 817>XP_005257599 Length = 1123 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KRKRTFV 9 KRK+TFV Sbjct: 811 KRKKTFV 817>XP_005257600 Length = 1123 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KRKRTFV 9 KRK+TFV Sbjct: 811 KRKKTFV 817>NP_056507 Length = 1932 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KRKRTF 8 KRKRTF Sbjct: 788 KRKRTF 793>NP_758441 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IKRKRTF 8 IK+KRTF Sbjct: 210 IKQKRTF 216>NP_055444 Length = 1344 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 A+KR R+F+ Sbjct: 342 AVKRGRSFI 350>NP_653191 Length = 191 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 A+K+K TF+ Sbjct: 80 AVKKKFTFI 88>NP_001258652 Length = 943 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AIKRKRT 7 A+KRKRT Sbjct: 649 AMKRKRT 655>NP_110420 Length = 1113 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AIKRKRT 7 A+KRKRT Sbjct: 819 AMKRKRT 825>XP_006725174 Length = 1306 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 A+KR R+F+ Sbjct: 304 AVKRGRSFI 312>XP_006725173 Length = 1328 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 A+KR R+F+ Sbjct: 367 AVKRGRSFI 375>XP_006725172 Length = 1329 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 A+KR R+F+ Sbjct: 327 AVKRGRSFI 335>XP_006725171 Length = 1330 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 A+KR R+F+ Sbjct: 328 AVKRGRSFI 336>XP_006725170 Length = 1345 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 A+KR R+F+ Sbjct: 343 AVKRGRSFI 351>XP_006725169 Length = 1368 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 A+KR R+F+ Sbjct: 367 AVKRGRSFI 375>XP_006725168 Length = 1368 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 A+KR R+F+ Sbjct: 366 AVKRGRSFI 374>XP_006725167 Length = 1369 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 A+KR R+F+ Sbjct: 367 AVKRGRSFI 375>XP_005266099 Length = 1306 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 A+KR R+F+ Sbjct: 304 AVKRGRSFI 312>XP_006716304 Length = 1328 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 A+KR R+F+ Sbjct: 367 AVKRGRSFI 375>XP_006716303 Length = 1329 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 A+KR R+F+ Sbjct: 327 AVKRGRSFI 335>XP_006716302 Length = 1330 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 A+KR R+F+ Sbjct: 328 AVKRGRSFI 336>XP_005266098 Length = 1345 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 A+KR R+F+ Sbjct: 343 AVKRGRSFI 351>XP_005266097 Length = 1368 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 A+KR R+F+ Sbjct: 367 AVKRGRSFI 375>XP_005266096 Length = 1368 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 A+KR R+F+ Sbjct: 366 AVKRGRSFI 374>XP_006716301 Length = 1369 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 A+KR R+F+ Sbjct: 367 AVKRGRSFI 375>XP_006714860 Length = 1146 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AIKRKRT 7 A+KRKRT Sbjct: 852 AMKRKRT 858>XP_006714859 Length = 1188 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AIKRKRT 7 A+KRKRT Sbjct: 894 AMKRKRT 900>XP_005268570 Length = 1188 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AIKRKRT 7 A+KRKRT Sbjct: 894 AMKRKRT 900>NP_003048 Length = 554 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RKRTFV 9 RKRTF+ Sbjct: 344 RKRTFI 349>NP_694857 Length = 506 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RKRTFV 9 RKRTF+ Sbjct: 344 RKRTFI 349>NP_001070650 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AIKRKRTFV 9 ++KRK+T+V Sbjct: 39 SLKRKQTWV 47>NP_036550 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AIKRKRTFV 9 ++KRK+T+V Sbjct: 39 SLKRKQTWV 47>NP_003260 Length = 385 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 +I+R RT+V Sbjct: 43 SIRRNRTYV 51>NP_001273031 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKRKRTFV 9 +I+R RT+V Sbjct: 80 SIRRNRTYV 88>XP_005257253 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AIKRKRTFV 9 ++KRK+T+V Sbjct: 39 SLKRKQTWV 47>XP_005257252 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AIKRKRTFV 9 ++KRK+T+V Sbjct: 39 SLKRKQTWV 47>XP_005267162 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RKRTFV 9 RKRTF+ Sbjct: 152 RKRTFI 157>XP_005267161 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RKRTFV 9 RKRTF+ Sbjct: 152 RKRTFI 157>XP_006715615 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RKRTFV 9 RKRTF+ Sbjct: 344 RKRTFI 349>XP_005267160 Length = 573 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RKRTFV 9 RKRTF+ Sbjct: 344 RKRTFI 349>XP_005267159 Length = 610 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RKRTFV 9 RKRTF+ Sbjct: 344 RKRTFI 349>NP_001230913 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KRKRTF 8 KRKRT+ Sbjct: 301 KRKRTY 306>NP_068810 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KRKRTF 8 KRKRT+ Sbjct: 301 KRKRTY 306>NP_001138610 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KRKRTF 8 KRKRT+ Sbjct: 298 KRKRTY 303>NP_001230914 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KRKRTF 8 KRKRT+ Sbjct: 301 KRKRTY 306>NP_001009 Length = 145 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KRKRTF 8 K+KRTF Sbjct: 7 KKKRTF 12>NP_000982 Length = 137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IKRKRT 7 +KRKRT Sbjct: 126 VKRKRT 131>NP_689497 Length = 233 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIKRKRTF 8 A+KRK+ F Sbjct: 68 ALKRKKRF 75Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.143 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 474,353 Number of extensions: 498 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |