Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 XP_005255358 18 1135 XP_005255356 18 1135 XP_005255355 18 1135 NP_001138483 18 1135 NP_056039 18 1935 NP_001106207 18 1935 XP_006713141 18 1935 XP_006713140 18 1935 XP_005265056 18 1935 XP_005275744 17 2528 XP_005257359 17 4312 NP_005524 17 4312 NP_060404 16 5631 NP_009049 16 5631 XP_005248786 16 5631 XP_006714558 16 5631 NP_056465 16 7355 NP_001271236 16 7355 NP_001271235 16 7355 NP_071918 16 7355 XP_005254649 16 7355 XP_005254648 16 7355 XP_006712476 16 7355 XP_006712475 16 7355 NP_055833 15 9605 NP_001186871 15 9605 NP_055843 15 9605 NP_001155038 15 9605 NP_001155037 15 9605 NP_001155036 15 9605 NP_001155035 15 9605 NP_001155034 15 9605 NP_001155033 15 9605 NP_001155032 15 9605 NP_002548 15 9605 XP_006715462 15 9605 XP_006715461 15 9605 XP_006715460 15 9605 XP_006715459 15 9605 XP_006715458 15 9605 XP_006715457 15 9605 XP_006715456 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IFTSEIGT 9 IFTSEIGT Sbjct: 2942 IFTSEIGT 2949>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IFTSEIGT 9 IFTSEIGT Sbjct: 2942 IFTSEIGT 2949>XP_005255358 Length = 1086 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AIFTSEIGT 9 A+FTSEIG+ Sbjct: 227 AMFTSEIGS 235>XP_005255356 Length = 1114 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AIFTSEIGT 9 A+FTSEIG+ Sbjct: 200 AMFTSEIGS 208>XP_005255355 Length = 1121 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AIFTSEIGT 9 A+FTSEIG+ Sbjct: 227 AMFTSEIGS 235>NP_001138483 Length = 1141 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AIFTSEIGT 9 A+FTSEIG+ Sbjct: 227 AMFTSEIGS 235>NP_056039 Length = 1233 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AIFTSEIGT 9 AI TSE+GT Sbjct: 461 AISTSEVGT 469>NP_001106207 Length = 1512 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AIFTSEIGT 9 AI TSE+GT Sbjct: 857 AISTSEVGT 865>XP_006713141 Length = 1274 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AIFTSEIGT 9 AI TSE+GT Sbjct: 461 AISTSEVGT 469>XP_006713140 Length = 1629 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AIFTSEIGT 9 AI TSE+GT Sbjct: 857 AISTSEVGT 865>XP_005265056 Length = 1670 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AIFTSEIGT 9 AI TSE+GT Sbjct: 857 AISTSEVGT 865>XP_005275744 Length = 231 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AIFTSEIG 8 A+FTS+IG Sbjct: 191 ALFTSQIG 198>XP_005257359 Length = 286 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AIFTSEIG 8 A+FTSE G Sbjct: 279 AVFTSESG 286>NP_005524 Length = 288 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AIFTSEIG 8 A+FTSE G Sbjct: 281 AVFTSESG 288>NP_060404 Length = 1821 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AIFTSEIGT 9 A+F E+GT Sbjct: 1127 AVFPEELGT 1135>NP_009049 Length = 3097 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFTSEIG 8 +FTSE+G Sbjct: 1537 LFTSELG 1543>XP_005248786 Length = 1820 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AIFTSEIGT 9 A+F E+GT Sbjct: 1126 AVFPEELGT 1134>XP_006714558 Length = 2612 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFTSEIG 8 +FTSE+G Sbjct: 1052 LFTSELG 1058>NP_056465 Length = 691 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSEIGT 9 TSEIGT Sbjct: 383 TSEIGT 388>NP_001271236 Length = 1111 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSEIGT 9 TSEIGT Sbjct: 706 TSEIGT 711>NP_001271235 Length = 1068 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSEIGT 9 TSEIGT Sbjct: 663 TSEIGT 668>NP_071918 Length = 1883 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSEIGT 9 TSEIGT Sbjct: 1478 TSEIGT 1483>XP_005254649 Length = 1819 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSEIGT 9 TSEIGT Sbjct: 1414 TSEIGT 1419>XP_005254648 Length = 1906 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSEIGT 9 TSEIGT Sbjct: 1501 TSEIGT 1506>XP_006712476 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSEIGT 9 TSEIGT Sbjct: 359 TSEIGT 364>XP_006712475 Length = 690 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TSEIGT 9 TSEIGT Sbjct: 383 TSEIGT 388>NP_055833 Length = 2465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AIFTSEI 7 AIF+SEI Sbjct: 2184 AIFSSEI 2190>NP_001186871 Length = 2476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AIFTSEI 7 AIF+SEI Sbjct: 2175 AIFSSEI 2181>NP_055843 Length = 1360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIFTSEI 7 A+FTSE+ Sbjct: 1000 ALFTSEL 1006>NP_001155038 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIFTSEI 7 A+FTSE+ Sbjct: 908 ALFTSEL 914>NP_001155037 Length = 1276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIFTSEI 7 A+FTSE+ Sbjct: 916 ALFTSEL 922>NP_001155036 Length = 1297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIFTSEI 7 A+FTSE+ Sbjct: 937 ALFTSEL 943>NP_001155035 Length = 1305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIFTSEI 7 A+FTSE+ Sbjct: 945 ALFTSEL 951>NP_001155034 Length = 1323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIFTSEI 7 A+FTSE+ Sbjct: 963 ALFTSEL 969>NP_001155033 Length = 1331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIFTSEI 7 A+FTSE+ Sbjct: 971 ALFTSEL 977>NP_001155032 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIFTSEI 7 A+FTSE+ Sbjct: 992 ALFTSEL 998>NP_002548 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TSEIGT 9 TSE+GT Sbjct: 598 TSEVGT 603>XP_006715462 Length = 2452 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AIFTSEI 7 AIF+SEI Sbjct: 2151 AIFSSEI 2157>XP_006715461 Length = 2456 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AIFTSEI 7 AIF+SEI Sbjct: 2175 AIFSSEI 2181>XP_006715460 Length = 2465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AIFTSEI 7 AIF+SEI Sbjct: 2184 AIFSSEI 2190>XP_006715459 Length = 2475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AIFTSEI 7 AIF+SEI Sbjct: 2174 AIFSSEI 2180>XP_006715458 Length = 2476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AIFTSEI 7 AIF+SEI Sbjct: 2175 AIFSSEI 2181>XP_006715457 Length = 2485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AIFTSEI 7 AIF+SEI Sbjct: 2184 AIFSSEI 2190>XP_006715456 Length = 2485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AIFTSEI 7 AIF+SEI Sbjct: 2184 AIFSSEI 2190Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.132 0.345 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 353,625 Number of extensions: 490 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |