Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_079141 17 2528 XP_005253541 17 2528 NP_001124396 17 3301 NP_001010866 17 3301 NP_036298 17 3301 XP_005251496 17 3301 XP_006710481 17 3301 XP_006710480 17 3301 NP_054890 16 5631 NP_000278 16 7355 NP_689549 16 7355 NP_001138663 16 7355 NP_002967 16 7355 XP_005249237 16 7355 XP_006713184 16 7355 XP_006712745 16 7355 XP_006712744 16 7355 XP_006712743 16 7355 NP_000830 16 7355 NP_001129396 16 7355 NP_000780 15 9605 NP_060445 15 9605 NP_001274750 15 9605 NP_001274751 15 9605 NP_001274752 15 9605 NP_057652 15 9605 NP_001186681 15 9605 NP_001129524 15 9605 NP_689572 15 9605 NP_001186682 15 9605 NP_071373 15 9605 XP_006723073 15 9605 XP_006723072 15 9605 XP_005258564 15 9605 XP_005258563 15 9605 XP_005258562 15 9605 XP_005250256 15 9605 XP_005266015 15 9605 NP_659802 15 9605>NP_079141 Length = 305 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IFSTTRLC 9 +FS+T+LC Sbjct: 101 VFSSTQLC 108>XP_005253541 Length = 289 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IFSTTRLC 9 +FS+T+LC Sbjct: 101 VFSSTQLC 108>NP_001124396 Length = 666 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FSTTRLC 9 FSTT LC Sbjct: 357 FSTTSLC 363>NP_001010866 Length = 392 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FSTTRLC 9 FSTT LC Sbjct: 357 FSTTSLC 363>NP_036298 Length = 956 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 STTRLC 9 STTRLC Sbjct: 175 STTRLC 180>XP_005251496 Length = 653 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 STTRLC 9 STTRLC Sbjct: 175 STTRLC 180>XP_006710481 Length = 542 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FSTTRLC 9 FSTT LC Sbjct: 357 FSTTSLC 363>XP_006710480 Length = 642 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FSTTRLC 9 FSTT LC Sbjct: 357 FSTTSLC 363>NP_054890 Length = 101 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FSTTRLC 9 FST R+C Sbjct: 55 FSTCRIC 61>NP_000278 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AIFSTTRLC 9 AIFS R C Sbjct: 513 AIFSRARRC 521>NP_689549 Length = 1066 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IFSTTRLC 9 +FSTT+ C Sbjct: 194 LFSTTQNC 201>NP_001138663 Length = 657 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FSTTRLC 9 F+TT LC Sbjct: 605 FTTTSLC 611>NP_002967 Length = 1682 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IFSTTRLC 9 IFS T LC Sbjct: 1323 IFSITGLC 1330>XP_005249237 Length = 892 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AIFSTTRLC 9 AIFS R C Sbjct: 425 AIFSRARRC 433>XP_006713184 Length = 872 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 STTRLC 9 +TTRLC Sbjct: 402 NTTRLC 407>XP_006712745 Length = 1682 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IFSTTRLC 9 IFS T LC Sbjct: 1323 IFSITGLC 1330>XP_006712744 Length = 1682 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IFSTTRLC 9 IFS T LC Sbjct: 1323 IFSITGLC 1330>XP_006712743 Length = 1682 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IFSTTRLC 9 IFS T LC Sbjct: 1323 IFSITGLC 1330>NP_000830 Length = 872 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 STTRLC 9 +TTRLC Sbjct: 402 NTTRLC 407>NP_001129396 Length = 1590 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IFSTTRLC 9 +FSTT+ C Sbjct: 119 LFSTTKDC 126>NP_000780 Length = 1306 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IFSTTRLC 9 I+ST ++C Sbjct: 150 IYSTAKVC 157>NP_060445 Length = 591 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IFSTTRLC 9 +FS T++C Sbjct: 488 LFSLTQIC 495>NP_001274750 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IFSTTRLC 9 +FS T++C Sbjct: 374 LFSLTQIC 381>NP_001274751 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IFSTTRLC 9 +FS T++C Sbjct: 374 LFSLTQIC 381>NP_001274752 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IFSTTRLC 9 +FS T++C Sbjct: 374 LFSLTQIC 381>NP_057652 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AIFSTT 6 AIFSTT Sbjct: 233 AIFSTT 238>NP_001186681 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFSTTRL 8 IF+TTR+ Sbjct: 310 IFNTTRI 316>NP_001129524 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFSTTRL 8 IF+TTR+ Sbjct: 299 IFNTTRI 305>NP_689572 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFSTTRL 8 IF+TTR+ Sbjct: 310 IFNTTRI 316>NP_001186682 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFSTTRL 8 IF+TTR+ Sbjct: 310 IFNTTRI 316>NP_071373 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FSTTRLC 9 F+TT LC Sbjct: 538 FATTYLC 544>XP_006723073 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFSTTRL 8 IF+TTR+ Sbjct: 310 IFNTTRI 316>XP_006723072 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFSTTRL 8 IF+TTR+ Sbjct: 181 IFNTTRI 187>XP_005258564 Length = 752 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFSTTRL 8 IF+TTR+ Sbjct: 310 IFNTTRI 316>XP_005258563 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFSTTRL 8 IF+TTR+ Sbjct: 310 IFNTTRI 316>XP_005258562 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFSTTRL 8 IF+TTR+ Sbjct: 310 IFNTTRI 316>XP_005250256 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FSTTRLC 9 F+TT LC Sbjct: 520 FTTTYLC 526>XP_005266015 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FSTTRLC 9 F+TT LC Sbjct: 538 FATTYLC 544>NP_659802 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FSTTRLC 9 F+TT LC Sbjct: 520 FTTTYLC 526Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.342 0.136 0.439 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 406,167 Number of extensions: 525 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |