Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005219 20 509 NP_001276866 20 509 NP_004439 20 509 NP_001276865 20 509 NP_001005862 20 509 XP_005257197 20 509 XP_006721828 20 509 NP_001036064 19 665 NP_005226 19 665 NP_001973 19 665 XP_005246434 19 665 XP_005246433 19 665 XP_005246432 19 665 XP_006712427 19 665 NP_079284 16 7355 NP_061905 16 7355 NP_001275537 16 7355 NP_001275536 16 7355 NP_002198 16 7355 XP_006711452 16 7355 NP_061028 15 9605 NP_001138409 15 9605 NP_001273358 15 9605 NP_001156685 15 9605 NP_000133 15 9605 NP_075254 15 9605 NP_079093 15 9605 NP_065928 15 9605 XP_005256527 15 9605 XP_006720755 15 9605 XP_006713936 15 9605 XP_006713935 15 9605 XP_006713934 15 9605 XP_006713933 15 9605 XP_006713932 15 9605 XP_006713931 15 9605 XP_005270607 15 9605>NP_005219 Length = 1210 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IDVYMIMV 9 IDVYMIMV Sbjct: 941 IDVYMIMV 948>NP_001276866 Length = 1055 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IDVYMIMV 9 IDVYMIMV Sbjct: 949 IDVYMIMV 956>NP_004439 Length = 1255 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IDVYMIMV 9 IDVYMIMV Sbjct: 949 IDVYMIMV 956>NP_001276865 Length = 1240 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IDVYMIMV 9 IDVYMIMV Sbjct: 934 IDVYMIMV 941>NP_001005862 Length = 1225 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IDVYMIMV 9 IDVYMIMV Sbjct: 919 IDVYMIMV 926>XP_005257197 Length = 1225 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IDVYMIMV 9 IDVYMIMV Sbjct: 919 IDVYMIMV 926>XP_006721828 Length = 1336 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IDVYMIMV 9 IDVYMIMV Sbjct: 1030 IDVYMIMV 1037>NP_001036064 Length = 1292 Score = 19.2 bits (38), Expect = 665 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 IDVYMIMV 9 IDVYM+MV Sbjct: 947 IDVYMVMV 954>NP_005226 Length = 1308 Score = 19.2 bits (38), Expect = 665 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 IDVYMIMV 9 IDVYM+MV Sbjct: 947 IDVYMVMV 954>NP_001973 Length = 1342 Score = 19.2 bits (38), Expect = 665 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 IDVYMIMV 9 IDVYM+MV Sbjct: 938 IDVYMVMV 945>XP_005246434 Length = 1282 Score = 19.2 bits (38), Expect = 665 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 IDVYMIMV 9 IDVYM+MV Sbjct: 937 IDVYMVMV 944>XP_005246433 Length = 1298 Score = 19.2 bits (38), Expect = 665 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 IDVYMIMV 9 IDVYM+MV Sbjct: 937 IDVYMVMV 944>XP_005246432 Length = 1307 Score = 19.2 bits (38), Expect = 665 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 IDVYMIMV 9 IDVYM+MV Sbjct: 962 IDVYMVMV 969>XP_006712427 Length = 1323 Score = 19.2 bits (38), Expect = 665 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 IDVYMIMV 9 IDVYM+MV Sbjct: 962 IDVYMVMV 969>NP_079284 Length = 877 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IDVYMI 7 +DVYMI Sbjct: 580 VDVYMI 585>NP_061905 Length = 1074 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IDVYMI 7 +DVYMI Sbjct: 580 VDVYMI 585>NP_001275537 Length = 1097 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IDVYMI 7 +DVYMI Sbjct: 603 VDVYMI 608>NP_001275536 Length = 1035 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IDVYMI 7 +DVYMI Sbjct: 603 VDVYMI 608>NP_002198 Length = 1035 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 IDVYMIM 8 ID+YM++ Sbjct: 916 IDIYMLL 922>XP_006711452 Length = 805 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IDVYMI 7 +DVYMI Sbjct: 580 VDVYMI 585>NP_061028 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 AIDVYMIM 8 AID+Y+++ Sbjct: 327 AIDIYILV 334>NP_001138409 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DVYMIMV 9 DVY +MV Sbjct: 688 DVYTVMV 694>NP_001273358 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IDVYMI 7 +DVYMI Sbjct: 148 LDVYMI 153>NP_001156685 Length = 808 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DVYMIM 8 D+YMIM Sbjct: 724 DLYMIM 729>NP_000133 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DVYMIM 8 D+YMIM Sbjct: 722 DLYMIM 727>NP_075254 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DVYMIM 8 D+YMIM Sbjct: 610 DLYMIM 615>NP_079093 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IDVYMI 7 +DVYMI Sbjct: 508 LDVYMI 513>NP_065928 Length = 4427 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 AIDVYMI 7 A+D+YM+ Sbjct: 512 AVDLYML 518>XP_005256527 Length = 4427 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 AIDVYMI 7 A+D+YM+ Sbjct: 512 AVDLYML 518>XP_006720755 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IDVYMI 7 +DVYMI Sbjct: 508 LDVYMI 513>XP_006713936 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DVYMIM 8 D+YMIM Sbjct: 722 DLYMIM 727>XP_006713935 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DVYMIM 8 D+YMIM Sbjct: 723 DLYMIM 728>XP_006713934 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DVYMIM 8 D+YMIM Sbjct: 724 DLYMIM 729>XP_006713933 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DVYMIM 8 D+YMIM Sbjct: 725 DLYMIM 730>XP_006713932 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DVYMIM 8 D+YMIM Sbjct: 726 DLYMIM 731>XP_006713931 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DVYMIM 8 D+YMIM Sbjct: 726 DLYMIM 731>XP_005270607 Length = 490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DVYMIMV 9 DVY +MV Sbjct: 455 DVYTVMV 461Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.348 0.152 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 319,821 Number of extensions: 264 Number of successful extensions: 37 Number of sequences better than 10000.0: 37 Number of HSP's gapped: 37 Number of HSP's successfully gapped: 37 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |