Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 18 1482 NP_000170 18 1482 NP_001268422 18 1482 NP_001268423 18 1482 XP_005264328 18 1482 NP_003874 16 5631 XP_006714865 16 5631 NP_689542 16 5631 NP_057613 16 7355 NP_005784 16 7355 XP_006719897 16 7355 XP_006719896 16 7355 XP_006719895 16 7355 XP_005266476 16 7355 XP_005264851 16 7355 XP_005264850 16 7355 XP_005264849 16 7355 XP_006712984 16 7355 XP_005264847 16 7355 XP_005264846 16 7355 NP_004360 15 9605 NP_476508 15 9605 NP_476507 15 9605 NP_002461 15 9605 NP_683682 15 9605 NP_001073922 15 9605 NP_001268370 15 9605 NP_110425 15 9605 XP_006723202 15 9605 XP_005258796 15 9605 XP_006721591 15 9605 XP_005246123 15 9605 XP_005246122 15 9605 XP_006712316 15 9605 NP_055198 15 9605 NP_659400 15 9605 NP_076407 15 9605>NP_001268421 Length = 1230 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AIAHSLVLV 9 A AHSLVLV Sbjct: 1074 ATAHSLVLV 1082>NP_000170 Length = 1360 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AIAHSLVLV 9 A AHSLVLV Sbjct: 1204 ATAHSLVLV 1212>NP_001268422 Length = 1058 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AIAHSLVLV 9 A AHSLVLV Sbjct: 902 ATAHSLVLV 910>NP_001268423 Length = 1058 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AIAHSLVLV 9 A AHSLVLV Sbjct: 902 ATAHSLVLV 910>XP_005264328 Length = 1261 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AIAHSLVLV 9 A AHSLVLV Sbjct: 1105 ATAHSLVLV 1113>NP_003874 Length = 428 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+ HSLVL Sbjct: 30 ALTHSLVL 37>XP_006714865 Length = 266 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+ HSLVL Sbjct: 30 ALTHSLVL 37>NP_689542 Length = 414 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AIAHSLVLV 9 ++AH++VLV Sbjct: 378 SVAHTVVLV 386>NP_057613 Length = 1188 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+ HSL+L Sbjct: 968 ALVHSLIL 975>NP_005784 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+AH L+L Sbjct: 30 AVAHPLIL 37>XP_006719897 Length = 1148 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+ HSL+L Sbjct: 928 ALVHSLIL 935>XP_006719896 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+ HSL+L Sbjct: 785 ALVHSLIL 792>XP_006719895 Length = 1082 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+ HSL+L Sbjct: 862 ALVHSLIL 869>XP_005266476 Length = 1148 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+ HSL+L Sbjct: 928 ALVHSLIL 935>XP_005264851 Length = 163 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+AH L+L Sbjct: 22 AVAHPLIL 29>XP_005264850 Length = 171 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+AH L+L Sbjct: 30 AVAHPLIL 37>XP_005264849 Length = 186 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+AH L+L Sbjct: 22 AVAHPLIL 29>XP_006712984 Length = 279 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+AH L+L Sbjct: 180 AVAHPLIL 187>XP_005264847 Length = 321 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+AH L+L Sbjct: 180 AVAHPLIL 187>XP_005264846 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+AH L+L Sbjct: 180 AVAHPLIL 187>NP_004360 Length = 3177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+ H+LVL Sbjct: 2561 AVGHALVL 2568>NP_476508 Length = 2971 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+ H+LVL Sbjct: 2355 AVGHALVL 2362>NP_476507 Length = 2570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+ H+LVL Sbjct: 1954 AVGHALVL 1961>NP_002461 Length = 1940 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+ HSLVL Sbjct: 684 AMEHSLVL 691>NP_683682 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AHSLVL 8 AHSLVL Sbjct: 184 AHSLVL 189>NP_001073922 Length = 2190 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIAHSLVLV 9 A+AH L+L+ Sbjct: 1870 AVAHPLLLL 1878>NP_001268370 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AHSLVL 8 AHSLVL Sbjct: 184 AHSLVL 189>NP_110425 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AHSLVL 8 AHSLVL Sbjct: 184 AHSLVL 189>XP_006723202 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AHSLVL 8 AHSLVL Sbjct: 42 AHSLVL 47>XP_005258796 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AHSLVL 8 AHSLVL Sbjct: 42 AHSLVL 47>XP_006721591 Length = 1940 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+ HSLVL Sbjct: 684 AMEHSLVL 691>XP_005246123 Length = 2770 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+ H+LVL Sbjct: 2154 AVGHALVL 2161>XP_005246122 Length = 2977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+ H+LVL Sbjct: 2361 AVGHALVL 2368>XP_006712316 Length = 3010 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIAHSLVL 8 A+ H+LVL Sbjct: 2394 AVGHALVL 2401>NP_055198 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AHSLVL 8 AHSLVL Sbjct: 42 AHSLVL 47>NP_659400 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AIAHSLVLV 9 A+ HS VL+ Sbjct: 594 ALTHSAVLI 602>NP_076407 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IAHSLVLV 9 + HSL+L+ Sbjct: 279 LGHSLILI 286Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.138 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 497,294 Number of extensions: 624 Number of successful extensions: 37 Number of sequences better than 10000.0: 37 Number of HSP's gapped: 37 Number of HSP's successfully gapped: 37 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |