Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245200 20 509 NP_000240 20 509 NP_001161089 20 509 XP_005265218 20 509 NP_001171953 17 4312 XP_006724302 17 4312 NP_037505 17 4312 NP_001257292 16 5631 NP_001257291 16 5631 NP_005044 16 5631 NP_001120867 16 5631 NP_660323 16 5631 XP_005246443 16 5631 XP_005246440 16 5631 XP_006712429 16 5631 XP_005246398 16 5631 XP_005246397 16 5631 XP_006712392 16 5631 XP_005246396 16 5631 XP_006712391 16 5631 XP_006712390 16 5631 XP_005246395 16 5631 XP_005246394 16 5631 XP_005246393 16 5631 NP_006419 16 7355 NP_001177716 16 7355 XP_005255098 16 7355 XP_005255097 16 7355 NP_002205 15 9605 NP_003310 15 9605 NP_597676 15 9605 NP_660350 15 9605 NP_596870 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_001189336 15 9605 NP_001189335 15 9605 NP_115886 15 9605 NP_060883 15 9605 XP_006717758 15 9605 XP_005249809 15 9605 XP_005249808 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 NP_001167453 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_001245200 Length = 687 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHVTITMKT 9 AHVTIT KT Sbjct: 111 AHVTITTKT 119>NP_000240 Length = 756 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHVTITMKT 9 AHVTIT KT Sbjct: 111 AHVTITTKT 119>NP_001161089 Length = 658 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHVTITMKT 9 AHVTIT KT Sbjct: 13 AHVTITTKT 21>XP_005265218 Length = 687 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHVTITMKT 9 AHVTIT KT Sbjct: 111 AHVTITTKT 119>NP_001171953 Length = 778 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AHVTITM 7 AH TITM Sbjct: 181 AHTTITM 187>XP_006724302 Length = 778 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AHVTITM 7 AH TITM Sbjct: 181 AHTTITM 187>NP_037505 Length = 765 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AHVTITM 7 AH TITM Sbjct: 181 AHTTITM 187>NP_001257292 Length = 308 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VTITMKT 9 VTIT+KT Sbjct: 3 VTITLKT 9>NP_001257291 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VTITMKT 9 VTIT+KT Sbjct: 3 VTITLKT 9>NP_005044 Length = 363 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VTITMKT 9 VTIT+KT Sbjct: 3 VTITLKT 9>NP_001120867 Length = 218 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AHVTIT 6 AHVTIT Sbjct: 88 AHVTIT 93>NP_660323 Length = 218 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AHVTIT 6 AHVTIT Sbjct: 88 AHVTIT 93>XP_005246443 Length = 506 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HVTITMKT 9 H T+TM+T Sbjct: 2 HCTLTMET 9>XP_005246440 Length = 532 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HVTITMKT 9 H T+TM+T Sbjct: 2 HCTLTMET 9>XP_006712429 Length = 532 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HVTITMKT 9 H T+TM+T Sbjct: 2 HCTLTMET 9>XP_005246398 Length = 218 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AHVTIT 6 AHVTIT Sbjct: 88 AHVTIT 93>XP_005246397 Length = 218 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AHVTIT 6 AHVTIT Sbjct: 88 AHVTIT 93>XP_006712392 Length = 218 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AHVTIT 6 AHVTIT Sbjct: 88 AHVTIT 93>XP_005246396 Length = 218 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AHVTIT 6 AHVTIT Sbjct: 88 AHVTIT 93>XP_006712391 Length = 236 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AHVTIT 6 AHVTIT Sbjct: 106 AHVTIT 111>XP_006712390 Length = 236 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AHVTIT 6 AHVTIT Sbjct: 106 AHVTIT 111>XP_005246395 Length = 236 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AHVTIT 6 AHVTIT Sbjct: 106 AHVTIT 111>XP_005246394 Length = 236 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AHVTIT 6 AHVTIT Sbjct: 106 AHVTIT 111>XP_005246393 Length = 236 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AHVTIT 6 AHVTIT Sbjct: 106 AHVTIT 111>NP_006419 Length = 256 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTITMKT 9 VT+TM+T Sbjct: 125 VTVTMRT 131>NP_001177716 Length = 385 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HVTITMK 8 HVT+T K Sbjct: 204 HVTLTQK 210>XP_005255098 Length = 256 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTITMKT 9 VT+TM+T Sbjct: 125 VTVTMRT 131>XP_005255097 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTITMKT 9 VT+TM+T Sbjct: 156 VTVTMRT 162>NP_002205 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HVTITMK 8 +VT+TMK Sbjct: 431 NVTVTMK 437>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HVTITMK 8 H+T TMK Sbjct: 2837 HITKTMK 2843>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HVTITMK 8 H+T TMK Sbjct: 2837 HITKTMK 2843>NP_660350 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AHVTITMKT 9 AH T+T+++ Sbjct: 237 AHTTLTLES 245>NP_596870 Length = 5604 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HVTITMK 8 H+T TMK Sbjct: 2883 HITKTMK 2889>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HVTITMK 8 H+T TMK Sbjct: 2883 HITKTMK 2889>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HVTITMK 8 H+T TMK Sbjct: 2883 HITKTMK 2889>NP_001189336 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AHVTITMKT 9 +H+T+ M+T Sbjct: 324 SHLTVHMRT 332>NP_001189335 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AHVTITMKT 9 +H+T+ M+T Sbjct: 430 SHLTVHMRT 438>NP_115886 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AHVTITMKT 9 +H+T+ M+T Sbjct: 366 SHLTVHMRT 374>NP_060883 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AHVTITMKT 9 AHV+ +KT Sbjct: 155 AHVSANLKT 163>XP_006717758 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AHVTITMKT 9 AH T+T+++ Sbjct: 237 AHTTLTLES 245>XP_005249809 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HVTITMK 8 +VT+TMK Sbjct: 296 NVTVTMK 302>XP_005249808 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HVTITMK 8 +VT+TMK Sbjct: 296 NVTVTMK 302>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HVTITMK 8 H+T TMK Sbjct: 2884 HITKTMK 2890>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HVTITMK 8 H+T TMK Sbjct: 2884 HITKTMK 2890>NP_001167453 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AHVTITMKT 9 AHV+ +KT Sbjct: 150 AHVSANLKT 158>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HVTITMK 8 H+T TMK Sbjct: 2883 HITKTMK 2889>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HVTITMK 8 H+T TMK Sbjct: 2837 HITKTMK 2843Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.117 0.316 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 422,960 Number of extensions: 672 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |