Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 18 1135 NP_444254 18 1135 NP_444253 18 1135 NP_444255 18 1135 XP_005247551 18 1135 XP_005247550 18 1135 XP_006713712 18 1135 XP_005247549 18 1135 NP_055365 17 2528 NP_077015 17 4312 NP_001127911 16 5631 NP_001127910 16 5631 NP_665696 16 5631 NP_940931 16 5631 XP_006721944 16 5631 XP_006721943 16 5631 XP_006721942 16 5631 NP_001127909 16 5631 NP_078858 16 7355 NP_001278232 16 7355 NP_001278214 16 7355 NP_778253 16 7355 XP_005268910 16 7355 NP_008986 15 9605 NP_115556 15 9605 NP_008958 15 9605 NP_203752 15 9605 NP_001139381 15 9605 NP_001188472 15 9605 NP_005351 15 9605 NP_683692 15 9605 NP_659484 15 9605 NP_055318 15 9605 NP_001035700 15 9605 NP_078856 15 9605 NP_060634 15 9605 NP_001121 15 9605 NP_945321 15 9605 NP_945320 15 9605 NP_001013648 15 9605 XP_006722727 15 9605 XP_006719406 15 9605 XP_006719170 15 9605 XP_005253479 15 9605 XP_006719169 15 9605 XP_006717660 15 9605 XP_005248208 15 9605 XP_005248207 15 9605 XP_006714021 15 9605 XP_005247133 15 9605 XP_006712876 15 9605 XP_006712875 15 9605 XP_006712874 15 9605 XP_006712873 15 9605 XP_006712872 15 9605 XP_005246976 15 9605 XP_005246975 15 9605 XP_006712177 15 9605 XP_006712176 15 9605 XP_005270519 15 9605 XP_005270518 15 9605 NP_001026974 15 9605>NP_444256 Length = 1794 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHVSVSEKN 9 A VSVSEKN Sbjct: 205 ARVSVSEKN 213>NP_444254 Length = 1845 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHVSVSEKN 9 A VSVSEKN Sbjct: 205 ARVSVSEKN 213>NP_444253 Length = 1914 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHVSVSEKN 9 A VSVSEKN Sbjct: 205 ARVSVSEKN 213>NP_444255 Length = 1863 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHVSVSEKN 9 A VSVSEKN Sbjct: 205 ARVSVSEKN 213>XP_005247551 Length = 1855 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHVSVSEKN 9 A VSVSEKN Sbjct: 215 ARVSVSEKN 223>XP_005247550 Length = 1856 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHVSVSEKN 9 A VSVSEKN Sbjct: 215 ARVSVSEKN 223>XP_006713712 Length = 1923 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHVSVSEKN 9 A VSVSEKN Sbjct: 215 ARVSVSEKN 223>XP_005247549 Length = 1924 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHVSVSEKN 9 A VSVSEKN Sbjct: 215 ARVSVSEKN 223>NP_055365 Length = 1032 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HVSVSEKN 9 HV V+EKN Sbjct: 943 HVEVTEKN 950>NP_077015 Length = 1004 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HVSVSEK 8 HVSV+EK Sbjct: 924 HVSVNEK 930>NP_001127911 Length = 1253 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HVSVSEK 8 HVS++EK Sbjct: 1138 HVSITEK 1144>NP_001127910 Length = 1253 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HVSVSEK 8 HVS++EK Sbjct: 1138 HVSITEK 1144>NP_665696 Length = 1210 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HVSVSEK 8 HVS++EK Sbjct: 1095 HVSITEK 1101>NP_940931 Length = 1503 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHVSVSEKN 9 AH+S+ E+N Sbjct: 1021 AHISLLEEN 1029>XP_006721944 Length = 1232 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHVSVSEKN 9 AH+S+ E+N Sbjct: 1021 AHISLLEEN 1029>XP_006721943 Length = 1456 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHVSVSEKN 9 AH+S+ E+N Sbjct: 1021 AHISLLEEN 1029>XP_006721942 Length = 1503 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHVSVSEKN 9 AH+S+ E+N Sbjct: 1021 AHISLLEEN 1029>NP_001127909 Length = 1237 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HVSVSEK 8 HVS++EK Sbjct: 1122 HVSITEK 1128>NP_078858 Length = 4981 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 HVSVSEKN 9 H++V+E+N Sbjct: 3076 HITVTEEN 3083>NP_001278232 Length = 4983 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 HVSVSEKN 9 H++V+E+N Sbjct: 3078 HITVTEEN 3085>NP_001278214 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 HVSVSEKN 9 H++V+E+N Sbjct: 3078 HITVTEEN 3085>NP_778253 Length = 578 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHVSVSEKN 9 +HVS+S +N Sbjct: 483 SHVSISVQN 491>XP_005268910 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHVSVSEKN 9 +HVS+S +N Sbjct: 250 SHVSISVQN 258>NP_008986 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 AHVSVSEKN 9 AH+ V KN Sbjct: 32 AHIQVVSKN 40>NP_115556 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SVSEKN 9 SVSEKN Sbjct: 142 SVSEKN 147>NP_008958 Length = 1522 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HVSVSEKN 9 H+S+ E+N Sbjct: 526 HISLQEEN 533>NP_203752 Length = 1861 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 HVSVSEKN 9 H+++ +KN Sbjct: 155 HITIEDKN 162>NP_001139381 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 HVSVSEKN 9 H+++ +KN Sbjct: 154 HITIEDKN 161>NP_001188472 Length = 716 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SVSEKN 9 SVSEKN Sbjct: 142 SVSEKN 147>NP_005351 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HVSVSEKN 9 HV SEKN Sbjct: 314 HVLESEKN 321>NP_683692 Length = 3051 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AHVSVSEK 8 AH S SEK Sbjct: 2022 AHTSPSEK 2029>NP_659484 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HVSVSEKN 9 HVS S KN Sbjct: 260 HVSGSSKN 267>NP_055318 Length = 2785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HVSVSEKN 9 H S+SE N Sbjct: 990 HFSISEDN 997>NP_001035700 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HVSVSE 7 H+SVSE Sbjct: 631 HISVSE 636>NP_078856 Length = 1120 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HVSVSE 7 H+SVSE Sbjct: 682 HISVSE 687>NP_060634 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHVSVSEKN 9 AH++ SEK+ Sbjct: 542 AHINNSEKH 550>NP_001121 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AHVSVSEKN 9 AH+S +KN Sbjct: 173 AHLSKEDKN 181>NP_945321 Length = 196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AHVSVSEKN 9 AH+S +KN Sbjct: 172 AHLSKEDKN 180>NP_945320 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AHVSVSEKN 9 AH+S +KN Sbjct: 240 AHLSKEDKN 248>NP_001013648 Length = 228 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HVSVSEKN 9 H++ S+KN Sbjct: 32 HINFSDKN 39>XP_006722727 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AHVSVSEKN 9 AH+S +KN Sbjct: 239 AHLSKEDKN 247>XP_006719406 Length = 2380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HVSVSEKN 9 H S+SE N Sbjct: 990 HFSISEDN 997>XP_006719170 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHVSVSEKN 9 AH++ SEK+ Sbjct: 467 AHINNSEKH 475>XP_005253479 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHVSVSEKN 9 AH++ SEK+ Sbjct: 485 AHINNSEKH 493>XP_006719169 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHVSVSEKN 9 AH++ SEK+ Sbjct: 542 AHINNSEKH 550>XP_006717660 Length = 1369 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 AHVSVSEKN 9 AH+ V KN Sbjct: 11 AHIQVVSKN 19>XP_005248208 Length = 3097 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AHVSVSEK 8 AH S SEK Sbjct: 2022 AHTSPSEK 2029>XP_005248207 Length = 3098 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AHVSVSEK 8 AH S SEK Sbjct: 2022 AHTSPSEK 2029>XP_006714021 Length = 3112 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AHVSVSEK 8 AH S SEK Sbjct: 2022 AHTSPSEK 2029>XP_005247133 Length = 1517 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HVSVSEKN 9 H+S+ E+N Sbjct: 521 HISLQEEN 528>XP_006712876 Length = 1783 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 HVSVSEKN 9 H+++ +KN Sbjct: 165 HITIEDKN 172>XP_006712875 Length = 1826 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 HVSVSEKN 9 H+++ +KN Sbjct: 120 HITIEDKN 127>XP_006712874 Length = 1836 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 HVSVSEKN 9 H+++ +KN Sbjct: 130 HITIEDKN 137>XP_006712873 Length = 1861 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 HVSVSEKN 9 H+++ +KN Sbjct: 155 HITIEDKN 162>XP_006712872 Length = 1861 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 HVSVSEKN 9 H+++ +KN Sbjct: 155 HITIEDKN 162>XP_005246976 Length = 1864 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 HVSVSEKN 9 H+++ +KN Sbjct: 165 HITIEDKN 172>XP_005246975 Length = 1871 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 HVSVSEKN 9 H+++ +KN Sbjct: 165 HITIEDKN 172>XP_006712177 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SVSEKN 9 SVSEKN Sbjct: 33 SVSEKN 38>XP_006712176 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SVSEKN 9 SVSEKN Sbjct: 33 SVSEKN 38>XP_005270519 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HVSVSEKN 9 HVS S KN Sbjct: 270 HVSGSSKN 277>XP_005270518 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HVSVSEKN 9 HVS S KN Sbjct: 270 HVSGSSKN 277>NP_001026974 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HVSVSEKN 9 HV SEKN Sbjct: 314 HVLESEKN 321Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.293 0.104 0.254 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 505,053 Number of extensions: 1010 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |