Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 20 509 NP_653080 20 509 XP_005267292 20 509 XP_005267291 20 509 XP_005267290 20 509 NP_060716 18 1482 XP_005273620 18 1482 NP_055203 18 1935 XP_006711338 18 1935 NP_001314 17 2528 NP_001002231 17 3301 NP_005542 17 3301 XP_006723272 17 3301 XP_006723269 17 3301 NP_569079 16 5631 NP_064520 16 5631 NP_444272 16 5631 NP_008875 16 5631 XP_005249289 16 5631 XP_005248097 16 5631 XP_005246159 16 5631 NP_000516 16 7355 NP_001159762 16 7355 NP_004647 16 7355 NP_002416 16 7355 NP_064549 16 7355 NP_115856 16 7355 NP_078948 16 7355 NP_065998 16 7355 XP_005256134 16 7355 XP_005256132 16 7355 XP_006721303 16 7355 XP_005256131 16 7355 XP_006718289 16 7355 XP_005263278 16 7355 XP_005263277 16 7355 NP_001192244 15 9605 NP_078912 15 9605 NP_001192245 15 9605 NP_055543 15 9605 NP_438112 15 9605 NP_036348 15 9605 NP_001242904 15 9605 NP_001008496 15 9605 NP_001243301 15 9605 NP_001243300 15 9605 NP_055173 15 9605 NP_078956 15 9605 XP_005262119 15 9605 XP_006724587 15 9605 XP_005274689 15 9605>NP_005091 Length = 1782 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AHVIKANSQ 9 AHVIKA+SQ Sbjct: 1580 AHVIKADSQ 1588>NP_653080 Length = 1684 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AHVIKANSQ 9 AHVIKA+SQ Sbjct: 1482 AHVIKADSQ 1490>XP_005267292 Length = 1677 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AHVIKANSQ 9 AHVIKA+SQ Sbjct: 1475 AHVIKADSQ 1483>XP_005267291 Length = 1684 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AHVIKANSQ 9 AHVIKA+SQ Sbjct: 1482 AHVIKADSQ 1490>XP_005267290 Length = 1782 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AHVIKANSQ 9 AHVIKA+SQ Sbjct: 1580 AHVIKADSQ 1588>NP_060716 Length = 208 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AHVIKANS 8 AH++KANS Sbjct: 72 AHLVKANS 79>XP_005273620 Length = 140 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AHVIKANS 8 AH++KANS Sbjct: 4 AHLVKANS 11>NP_055203 Length = 756 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 HVIKANSQ 9 H++KAN+Q Sbjct: 317 HILKANAQ 324>XP_006711338 Length = 568 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 HVIKANSQ 9 H++KAN+Q Sbjct: 317 HILKANAQ 324>NP_001314 Length = 149 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HVIKANSQ 9 H+IKA SQ Sbjct: 73 HIIKAQSQ 80>NP_001002231 Length = 223 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHVIKANSQ 9 AH +K NSQ Sbjct: 64 AHCLKKNSQ 72>NP_005542 Length = 261 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHVIKANSQ 9 AH +K NSQ Sbjct: 64 AHCLKKNSQ 72>XP_006723272 Length = 164 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHVIKANSQ 9 AH +K NSQ Sbjct: 64 AHCLKKNSQ 72>XP_006723269 Length = 290 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHVIKANSQ 9 AH +K NSQ Sbjct: 64 AHCLKKNSQ 72>NP_569079 Length = 640 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHVIKANSQ 9 AH+I +NS+ Sbjct: 278 AHIIASNSK 286>NP_064520 Length = 665 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHVIKANSQ 9 AH+I +NS+ Sbjct: 278 AHIIASNSK 286>NP_444272 Length = 453 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AHVIKANS 8 AHV+ +NS Sbjct: 190 AHVVSSNS 197>NP_008875 Length = 211 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHVIKANSQ 9 A V+K NSQ Sbjct: 46 ASVVKVNSQ 54>XP_005249289 Length = 419 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHVIKANSQ 9 AH+I +NS+ Sbjct: 278 AHIIASNSK 286>XP_005248097 Length = 357 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AHVIKANS 8 AHV+ +NS Sbjct: 190 AHVVSSNS 197>XP_005246159 Length = 211 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHVIKANSQ 9 A V+K NSQ Sbjct: 46 ASVVKVNSQ 54>NP_000516 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HVIKANS 8 HVI ANS Sbjct: 259 HVIDANS 265>NP_001159762 Length = 303 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HVIKANS 8 HVI ANS Sbjct: 172 HVIDANS 178>NP_004647 Length = 729 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HVIKANSQ 9 HV+K N Q Sbjct: 246 HVLKVNRQ 253>NP_002416 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HVIKANS 8 H++K+NS Sbjct: 466 HILKSNS 472>NP_064549 Length = 225 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AHVIKANSQ 9 AH+ K N+Q Sbjct: 213 AHLTKGNTQ 221>NP_115856 Length = 210 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AHVIKANSQ 9 AH+ K N+Q Sbjct: 198 AHLTKGNTQ 206>NP_078948 Length = 903 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HVIKANS 8 HV+K NS Sbjct: 471 HVLKVNS 477>NP_065998 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AHVIKANSQ 9 +H++K NS+ Sbjct: 96 SHLLKGNSE 104>XP_005256134 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AHVIKANSQ 9 +H++K NS+ Sbjct: 134 SHLLKGNSE 142>XP_005256132 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AHVIKANSQ 9 +H++K NS+ Sbjct: 96 SHLLKGNSE 104>XP_006721303 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AHVIKANSQ 9 +H++K NS+ Sbjct: 96 SHLLKGNSE 104>XP_005256131 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AHVIKANSQ 9 +H++K NS+ Sbjct: 134 SHLLKGNSE 142>XP_006718289 Length = 303 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HVIKANS 8 HVI ANS Sbjct: 172 HVIDANS 178>XP_005263278 Length = 620 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HVIKANS 8 HV+K NS Sbjct: 188 HVLKVNS 194>XP_005263277 Length = 759 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HVIKANS 8 HV+K NS Sbjct: 327 HVLKVNS 333>NP_001192244 Length = 459 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AHVIKA 6 AHV+KA Sbjct: 128 AHVVKA 133>NP_078912 Length = 459 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AHVIKA 6 AHV+KA Sbjct: 128 AHVVKA 133>NP_001192245 Length = 283 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AHVIKA 6 AHV+KA Sbjct: 128 AHVVKA 133>NP_055543 Length = 1322 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 AHVIKAN 7 +H++KAN Sbjct: 384 SHLVKAN 390>NP_438112 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 HVIKANSQ 9 H++K N Q Sbjct: 338 HILKENDQ 345>NP_036348 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 HVIKANSQ 9 H++K N Q Sbjct: 338 HILKENDQ 345>NP_001242904 Length = 873 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VIKANSQ 9 ++KANSQ Sbjct: 483 MVKANSQ 489>NP_001008496 Length = 882 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VIKANSQ 9 ++KANSQ Sbjct: 483 MVKANSQ 489>NP_001243301 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HVIKANS 8 H+IK+N+ Sbjct: 229 HIIKSNT 235>NP_001243300 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HVIKANS 8 H+IK+N+ Sbjct: 229 HIIKSNT 235>NP_055173 Length = 219 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AHVIKANSQ 9 AH++ NSQ Sbjct: 113 AHLVVINSQ 121>NP_078956 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HVIKANS 8 H+IK+N+ Sbjct: 229 HIIKSNT 235>XP_005262119 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 HVIKANSQ 9 H++K N Q Sbjct: 318 HILKENDQ 325>XP_006724587 Length = 1732 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 AHVIKAN 7 +H++KAN Sbjct: 384 SHLVKAN 390>XP_005274689 Length = 1762 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 AHVIKAN 7 +H++KAN Sbjct: 384 SHLVKAN 390Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.113 0.289 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 421,672 Number of extensions: 817 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |