Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001098992 18 1135 NP_001193556 18 1135 NP_001193555 18 1135 XP_006710016 18 1135 XP_005275770 18 1135 NP_001182163 17 2528 NP_065091 17 2528 NP_001278262 17 4312 NP_004614 17 4312 NP_001012339 17 4312 NP_919259 17 4312 XP_005276418 17 4312 XP_005272298 17 4312 XP_005248307 17 4312 XP_005248306 17 4312 XP_005276092 17 4312 NP_055855 16 5631 NP_001129175 16 5631 NP_038465 16 5631 NP_150091 16 5631 NP_001121689 16 5631 NP_066967 16 5631 XP_005251415 16 5631 XP_005251414 16 5631 XP_005251413 16 5631 XP_005251412 16 5631 XP_006712425 16 5631 XP_006712424 16 5631 NP_002325 16 7355 NP_036565 16 7355 NP_071926 16 7355 XP_006718294 16 7355 XP_005252980 16 7355 XP_005268557 16 7355 XP_006714855 16 7355 XP_006714854 16 7355 XP_005268555 16 7355 XP_005268554 16 7355 XP_005246485 16 7355 NP_001068567 15 9605 NP_003717 15 9605 NP_006398 15 9605 NP_009119 15 9605 NP_001269220 15 9605 NP_001269222 15 9605 XP_005257812 15 9605 NP_001116848 15 9605 NP_803875 15 9605>NP_001098992 Length = 452 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AHRKAVLRG 9 AHR+ +LRG Sbjct: 220 AHRREILRG 228>NP_001193556 Length = 452 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AHRKAVLRG 9 AHR+ +LRG Sbjct: 220 AHRREILRG 228>NP_001193555 Length = 452 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AHRKAVLRG 9 AHR+ +LRG Sbjct: 220 AHRREILRG 228>XP_006710016 Length = 452 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AHRKAVLRG 9 AHR+ +LRG Sbjct: 220 AHRREILRG 228>XP_005275770 Length = 452 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AHRKAVLRG 9 AHR+ +LRG Sbjct: 220 AHRREILRG 228>NP_001182163 Length = 452 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHRKAVLRG 9 AHR +LRG Sbjct: 220 AHRMEILRG 228>NP_065091 Length = 452 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHRKAVLRG 9 AHR +LRG Sbjct: 220 AHRMEILRG 228>NP_001278262 Length = 288 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HRKAVLRG 9 H KA++RG Sbjct: 150 HLKAIIRG 157>NP_004614 Length = 387 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HRKAVLRG 9 H KA++RG Sbjct: 150 HLKAIIRG 157>NP_001012339 Length = 531 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 HRKAVLRG 9 HR+A+L+G Sbjct: 68 HREALLKG 75>NP_919259 Length = 576 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 HRKAVLRG 9 HR+A+L+G Sbjct: 68 HREALLKG 75>XP_005276418 Length = 193 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HRKAVLRG 9 HR A LRG Sbjct: 13 HRPATLRG 20>XP_005272298 Length = 193 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HRKAVLRG 9 HR A LRG Sbjct: 13 HRPATLRG 20>XP_005248307 Length = 466 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 HRKAVLRG 9 HR+A+L+G Sbjct: 68 HREALLKG 75>XP_005248306 Length = 544 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 HRKAVLRG 9 HR+A+L+G Sbjct: 68 HREALLKG 75>XP_005276092 Length = 193 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HRKAVLRG 9 HR A LRG Sbjct: 13 HRPATLRG 20>NP_055855 Length = 2098 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AHRKAVLR 8 +H KAVLR Sbjct: 1992 SHSKAVLR 1999>NP_001129175 Length = 840 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HRKAVLR 8 HRK +LR Sbjct: 275 HRKVILR 281>NP_038465 Length = 859 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HRKAVLR 8 HRK +LR Sbjct: 294 HRKVILR 300>NP_150091 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHRKAVLRG 9 AHR+ +L+G Sbjct: 297 AHRRNMLKG 305>NP_001121689 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHRKAVLRG 9 AHR+ +L+G Sbjct: 297 AHRRNMLKG 305>NP_066967 Length = 333 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHRKAVLRG 9 AHR+ +L+G Sbjct: 297 AHRRNMLKG 305>XP_005251415 Length = 329 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHRKAVLRG 9 AHR+ +L+G Sbjct: 297 AHRRNMLKG 305>XP_005251414 Length = 331 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHRKAVLRG 9 AHR+ +L+G Sbjct: 297 AHRRNMLKG 305>XP_005251413 Length = 333 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHRKAVLRG 9 AHR+ +L+G Sbjct: 297 AHRRNMLKG 305>XP_005251412 Length = 351 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHRKAVLRG 9 AHR+ +L+G Sbjct: 297 AHRRNMLKG 305>XP_006712425 Length = 1349 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AHRKAVLR 8 +H KAVLR Sbjct: 1243 SHSKAVLR 1250>XP_006712424 Length = 1376 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AHRKAVLR 8 +H KAVLR Sbjct: 1270 SHSKAVLR 1277>NP_002325 Length = 1905 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AHRKAVL 7 +HRKAV+ Sbjct: 630 SHRKAVI 636>NP_036565 Length = 1304 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AHRKAVLR 8 AH+KA+ R Sbjct: 1068 AHKKAIRR 1075>NP_071926 Length = 1544 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HRKAVLR 8 HRK +LR Sbjct: 54 HRKRILR 60>XP_006718294 Length = 1808 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AHRKAVL 7 +HRKAV+ Sbjct: 630 SHRKAVI 636>XP_005252980 Length = 1809 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AHRKAVL 7 +HRKAV+ Sbjct: 630 SHRKAVI 636>XP_005268557 Length = 934 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HRKAVLR 8 HRK +LR Sbjct: 54 HRKRILR 60>XP_006714855 Length = 1473 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HRKAVLR 8 HRK +LR Sbjct: 54 HRKRILR 60>XP_006714854 Length = 1486 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HRKAVLR 8 HRK +LR Sbjct: 54 HRKRILR 60>XP_005268555 Length = 1524 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HRKAVLR 8 HRK +LR Sbjct: 54 HRKRILR 60>XP_005268554 Length = 1531 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HRKAVLR 8 HRK +LR Sbjct: 54 HRKRILR 60>XP_005246485 Length = 1158 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AHRKAVLR 8 AH+KA+ R Sbjct: 922 AHKKAIRR 929>NP_001068567 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HRKAVLRG 9 HR +LRG Sbjct: 37 HRDHILRG 44>NP_003717 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HRKAVLRG 9 HR +LRG Sbjct: 37 HRDHILRG 44>NP_006398 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AHRKAVLR 8 AH K VLR Sbjct: 84 AHNKDVLR 91>NP_009119 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AHRKAVLRG 9 AHR + +RG Sbjct: 650 AHRLSTVRG 658>NP_001269220 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AHRKAVLRG 9 AHR + +RG Sbjct: 667 AHRLSTVRG 675>NP_001269222 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AHRKAVLRG 9 AHR + +RG Sbjct: 562 AHRLSTVRG 570>XP_005257812 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HRKAVLRG 9 HR +LRG Sbjct: 37 HRDHILRG 44>NP_001116848 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HRKAVLRG 9 H K++L+G Sbjct: 185 HMKSILKG 192>NP_803875 Length = 4243 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HRKAVLRG 9 H KAVL G Sbjct: 3849 HNKAVLVG 3856Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.137 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 479,113 Number of extensions: 727 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |