Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 19 869 XP_005265800 19 869 XP_006714103 19 869 XP_006714102 19 869 NP_004786 17 4312 NP_001264044 17 4312 NP_001363 17 4312 NP_775899 17 4312 NP_004653 17 4312 NP_997715 16 5631 NP_065681 16 5631 NP_066124 16 5631 NP_063939 16 5631 XP_006717999 16 5631 NP_689837 16 7355 NP_001229306 16 7355 NP_597713 16 7355 NP_001273661 16 7355 NP_001166171 16 7355 NP_078995 16 7355 NP_001273662 16 7355 XP_006720043 16 7355 XP_006720042 16 7355 XP_005268391 16 7355 XP_005268390 16 7355 XP_005271971 16 7355 XP_005271944 16 7355 XP_005271943 16 7355 XP_006714596 16 7355 XP_005271942 16 7355 NP_001271271 15 9605 NP_001231879 15 9605 NP_055582 15 9605 NP_056505 15 9605 NP_001177925 15 9605 NP_006400 15 9605 NP_005190 15 9605 NP_001230242 15 9605 NP_055670 15 9605 NP_005711 15 9605 XP_006715889 15 9605 XP_006715888 15 9605 XP_006712484 15 9605 XP_006712483 15 9605 XP_005246521 15 9605>NP_006197 Length = 1089 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHNVLLAQG 9 A NVLLAQG Sbjct: 821 ARNVLLAQG 829>XP_005265800 Length = 1089 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHNVLLAQG 9 A NVLLAQG Sbjct: 821 ARNVLLAQG 829>XP_006714103 Length = 1111 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHNVLLAQG 9 A NVLLAQG Sbjct: 843 ARNVLLAQG 851>XP_006714102 Length = 1114 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHNVLLAQG 9 A NVLLAQG Sbjct: 846 ARNVLLAQG 854>NP_004786 Length = 1012 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AHNVLLA 7 AHN+LLA Sbjct: 268 AHNLLLA 274>NP_001264044 Length = 4516 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HNVLLAQG 9 HNV L QG Sbjct: 3960 HNVSLGQG 3967>NP_001363 Length = 4486 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HNVLLAQG 9 HNV L QG Sbjct: 3930 HNVSLGQG 3937>NP_775899 Length = 4462 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HNVLLAQG 9 HNV L QG Sbjct: 3906 HNVSLGQG 3913>NP_004653 Length = 798 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HNVLLAQG 9 HNV L QG Sbjct: 242 HNVSLGQG 249>NP_997715 Length = 202 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AHNVLLAQG 9 AH+V LA+G Sbjct: 157 AHSVRLARG 165>NP_065681 Length = 1072 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHNVLLAQG 9 A N+L+A+G Sbjct: 877 ARNILVAEG 885>NP_066124 Length = 1114 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHNVLLAQG 9 A N+L+A+G Sbjct: 877 ARNILVAEG 885>NP_063939 Length = 486 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HNVLLAQG 9 H VLLA G Sbjct: 312 HRVLLAHG 319>XP_006717999 Length = 1207 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHNVLLAQG 9 A N+L+A+G Sbjct: 970 ARNILVAEG 978>NP_689837 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NVLLAQG 9 NVLL QG Sbjct: 111 NVLLVQG 117>NP_001229306 Length = 385 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NVLLAQG 9 NVLL QG Sbjct: 111 NVLLVQG 117>NP_597713 Length = 847 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AHNVLLAQG 9 +HN LA+G Sbjct: 519 SHNTALARG 527>NP_001273661 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HNVLLAQG 9 +NVLLA G Sbjct: 138 YNVLLAYG 145>NP_001166171 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AHNVLLAQG 9 +HN LA+G Sbjct: 519 SHNTALARG 527>NP_078995 Length = 336 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HNVLLAQG 9 +NVLLA G Sbjct: 138 YNVLLAYG 145>NP_001273662 Length = 236 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HNVLLAQG 9 +NVLLA G Sbjct: 138 YNVLLAYG 145>XP_006720043 Length = 190 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HNVLLAQG 9 +NVLLA G Sbjct: 138 YNVLLAYG 145>XP_006720042 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HNVLLAQG 9 +NVLLA G Sbjct: 35 YNVLLAYG 42>XP_005268391 Length = 266 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HNVLLAQG 9 +NVLLA G Sbjct: 60 YNVLLAYG 67>XP_005268390 Length = 291 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HNVLLAQG 9 +NVLLA G Sbjct: 85 YNVLLAYG 92>XP_005271971 Length = 272 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NVLLAQG 9 NVLL QG Sbjct: 111 NVLLVQG 117>XP_005271944 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AHNVLLAQG 9 +HN LA+G Sbjct: 519 SHNTALARG 527>XP_005271943 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AHNVLLAQG 9 +HN LA+G Sbjct: 519 SHNTALARG 527>XP_006714596 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AHNVLLAQG 9 +HN LA+G Sbjct: 519 SHNTALARG 527>XP_005271942 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AHNVLLAQG 9 +HN LA+G Sbjct: 519 SHNTALARG 527>NP_001271271 Length = 177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HNVLLAQG 9 H+VL A+G Sbjct: 93 HSVLCAEG 100>NP_001231879 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HNVLLAQG 9 H V +AQG Sbjct: 98 HKVCIAQG 105>NP_055582 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HNVLLAQG 9 H V +AQG Sbjct: 98 HKVCIAQG 105>NP_056505 Length = 1315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NVLLAQG 9 N+LLA+G Sbjct: 130 NILLAKG 136>NP_001177925 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HNVLLAQG 9 +NVLLA G Sbjct: 139 NNVLLAAG 146>NP_006400 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HNVLLAQG 9 +NVLLA G Sbjct: 153 NNVLLAAG 160>NP_005190 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AHNVLLAQ 8 A NVLLAQ Sbjct: 277 AINVLLAQ 284>NP_001230242 Length = 1294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NVLLAQG 9 N+LLA+G Sbjct: 130 NILLAKG 136>NP_055670 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NVLLAQG 9 +VLLAQG Sbjct: 117 SVLLAQG 123>NP_005711 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HNVLLAQG 9 +NVLLA G Sbjct: 153 NNVLLAAG 160>XP_006715889 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HNVLLAQG 9 +NVLLA G Sbjct: 153 NNVLLAAG 160>XP_006715888 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HNVLLAQG 9 +NVLLA G Sbjct: 153 NNVLLAAG 160>XP_006712484 Length = 851 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NVLLAQG 9 N+LLA+G Sbjct: 130 NILLAKG 136>XP_006712483 Length = 1306 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NVLLAQG 9 N+LLA+G Sbjct: 130 NILLAKG 136>XP_005246521 Length = 1315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NVLLAQG 9 N+LLA+G Sbjct: 130 NILLAKG 136Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.132 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 444,993 Number of extensions: 686 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |