Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000360 19 869 XP_005268094 19 869 NP_001274426 18 1482 NP_071929 18 1482 XP_005250584 18 1482 NP_001012301 17 2528 NP_115730 17 3301 NP_898888 17 3301 NP_004358 17 4312 NP_113597 17 4312 NP_001015891 16 5631 NP_057367 16 5631 NP_071351 16 7355 NP_001050 16 7355 NP_001829 15 9605 NP_002634 15 9605 NP_775097 15 9605 NP_612382 15 9605 NP_001018655 15 9605 NP_001277117 15 9605 NP_001277118 15 9605 NP_001018656 15 9605 NP_001277121 15 9605 NP_001277120 15 9605 NP_001277123 15 9605 NP_001018657 15 9605 NP_001277122 15 9605 NP_001277119 15 9605 NP_001018654 15 9605 NP_004863 15 9605 XP_005264426 15 9605 XP_006711114 15 9605 XP_005271408 15 9605 XP_005271407 15 9605 NP_112222 15 9605>NP_000360 Length = 764 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AHIVFVLTL 9 A+IVFVLTL Sbjct: 581 AYIVFVLTL 589>XP_005268094 Length = 764 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AHIVFVLTL 9 A+IVFVLTL Sbjct: 581 AYIVFVLTL 589>NP_001274426 Length = 697 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 HIVFVLTL 9 HI+F+LTL Sbjct: 309 HIIFLLTL 316>NP_071929 Length = 697 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 HIVFVLTL 9 HI+F+LTL Sbjct: 309 HIIFLLTL 316>XP_005250584 Length = 430 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 HIVFVLTL 9 HI+F+LTL Sbjct: 309 HIIFLLTL 316>NP_001012301 Length = 569 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HIVFVLT 8 HI+F+LT Sbjct: 48 HIIFILT 54>NP_115730 Length = 146 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AHIVFVLTL 9 AH+V V+TL Sbjct: 17 AHLVVVITL 25>NP_898888 Length = 140 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AHIVFVLTL 9 AH+V V+TL Sbjct: 17 AHLVVVITL 25>NP_004358 Length = 374 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AHIVFVLTL 9 A I+FVLTL Sbjct: 91 ADILFVLTL 99>NP_113597 Length = 374 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AHIVFVLTL 9 A I+FVLTL Sbjct: 91 ADILFVLTL 99>NP_001015891 Length = 169 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 HIVFVL 7 HIVFVL Sbjct: 87 HIVFVL 92>NP_057367 Length = 172 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 HIVFVL 7 HIVFVL Sbjct: 90 HIVFVL 95>NP_071351 Length = 2752 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HIVFVLTL 9 HI+F +TL Sbjct: 74 HIIFHITL 81>NP_001050 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HIVFVLT 8 HI F+LT Sbjct: 316 HIYFILT 322>NP_001829 Length = 378 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AHIVFVLTL 9 A I+F+LTL Sbjct: 103 ADILFLLTL 111>NP_002634 Length = 219 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 HIVFVL 7 H++FVL Sbjct: 95 HVIFVL 100>NP_775097 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 HIVFVL 7 H++FVL Sbjct: 95 HVIFVL 100>NP_612382 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AHIVFV 6 AH+VFV Sbjct: 315 AHLVFV 320>NP_001018655 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AHIVFV 6 AH+VFV Sbjct: 315 AHLVFV 320>NP_001277117 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AHIVFV 6 AH+VFV Sbjct: 315 AHLVFV 320>NP_001277118 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AHIVFV 6 AH+VFV Sbjct: 315 AHLVFV 320>NP_001018656 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AHIVFV 6 AH+VFV Sbjct: 315 AHLVFV 320>NP_001277121 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AHIVFV 6 AH+VFV Sbjct: 315 AHLVFV 320>NP_001277120 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AHIVFV 6 AH+VFV Sbjct: 315 AHLVFV 320>NP_001277123 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AHIVFV 6 AH+VFV Sbjct: 315 AHLVFV 320>NP_001018657 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AHIVFV 6 AH+VFV Sbjct: 315 AHLVFV 320>NP_001277122 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AHIVFV 6 AH+VFV Sbjct: 315 AHLVFV 320>NP_001277119 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AHIVFV 6 AH+VFV Sbjct: 315 AHLVFV 320>NP_001018654 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AHIVFV 6 AH+VFV Sbjct: 315 AHLVFV 320>NP_004863 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HIVFVLTL 9 H++F LTL Sbjct: 139 HLLFPLTL 146>XP_005264426 Length = 187 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 HIVFVL 7 H++FVL Sbjct: 95 HVIFVL 100>XP_006711114 Length = 256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HIVFVLTL 9 H++F LTL Sbjct: 72 HLLFPLTL 79>XP_005271408 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HIVFVLTL 9 H++F LTL Sbjct: 72 HLLFPLTL 79>XP_005271407 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HIVFVLTL 9 H++F LTL Sbjct: 139 HLLFPLTL 146>NP_112222 Length = 294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AHIVFVLTL 9 A ++FVLT+ Sbjct: 217 AALIFVLTI 225Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.350 0.154 0.446 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 441,568 Number of extensions: 618 Number of successful extensions: 35 Number of sequences better than 10000.0: 35 Number of HSP's gapped: 35 Number of HSP's successfully gapped: 35 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.9 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |