Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 19 869 NP_000170 19 869 NP_001268422 19 869 NP_001268423 19 869 XP_005264328 19 869 NP_001273760 17 2528 NP_001273759 17 2528 NP_001259 17 2528 NP_689540 17 2528 XP_006720086 17 2528 XP_006720085 17 2528 XP_006720084 17 2528 XP_005266301 17 2528 XP_005266299 17 2528 XP_006719822 17 2528 XP_006719821 17 2528 NP_059127 17 3301 NP_001025162 17 3301 NP_073571 17 3301 NP_001161337 17 3301 NP_060085 17 3301 NP_055772 17 3301 XP_006720300 17 3301 XP_006720299 17 3301 XP_006720298 17 3301 XP_005269985 17 3301 XP_005250899 17 3301 XP_005250898 17 3301 XP_005250897 17 3301 XP_005250896 17 3301 XP_005250895 17 3301 NP_803879 17 4312 NP_803881 17 4312 NP_001258992 17 4312 NP_110428 17 4312 NP_001229291 17 4312 NP_001258991 17 4312 NP_001092270 17 4312 NP_001258990 17 4312 XP_006726908 17 4312 XP_005276770 17 4312 XP_006724671 17 4312 XP_006724670 17 4312 XP_005254968 17 4312 XP_005254967 17 4312 XP_006720570 17 4312 NP_006113 17 4312 NP_001136105 16 5631 NP_055123 16 5631 XP_006726589 16 5631 XP_005256637 16 5631 XP_005256636 16 5631 XP_006718462 16 5631 XP_006710010 16 5631 NP_000383 16 7355 NP_001138505 16 7355 XP_006717694 16 7355 XP_006717693 16 7355 NP_000543 15 9605 NP_079535 15 9605 NP_751898 15 9605 NP_002432 15 9605 NP_751897 15 9605 NP_066008 15 9605 NP_758952 15 9605 NP_001159530 15 9605 NP_001020368 15 9605 NP_892014 15 9605 NP_570718 15 9605 NP_001257310 15 9605 XP_006718498 15 9605 XP_005273831 15 9605 XP_005273830 15 9605 XP_005273828 15 9605 XP_005273827 15 9605 XP_005273826 15 9605 XP_005273824 15 9605 XP_005273823 15 9605 XP_005273822 15 9605 NP_003991 15 9605 NP_001020370 15 9605>NP_001268421 Length = 1230 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHFLVLVDE 9 AH LVLVDE Sbjct: 1076 AHSLVLVDE 1084>NP_000170 Length = 1360 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHFLVLVDE 9 AH LVLVDE Sbjct: 1206 AHSLVLVDE 1214>NP_001268422 Length = 1058 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHFLVLVDE 9 AH LVLVDE Sbjct: 904 AHSLVLVDE 912>NP_001268423 Length = 1058 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHFLVLVDE 9 AH LVLVDE Sbjct: 904 AHSLVLVDE 912>XP_005264328 Length = 1261 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AHFLVLVDE 9 AH LVLVDE Sbjct: 1107 AHSLVLVDE 1115>NP_001273760 Length = 527 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AH LVL DE Sbjct: 243 AHTLVLTDE 251>NP_001273759 Length = 556 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AH LVL DE Sbjct: 272 AHTLVLTDE 280>NP_001259 Length = 551 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AH LVL DE Sbjct: 267 AHTLVLTDE 275>NP_689540 Length = 723 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HFLVLVDE 9 H+LV VDE Sbjct: 273 HYLVAVDE 280>XP_006720086 Length = 703 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HFLVLVDE 9 H+LV VDE Sbjct: 246 HYLVAVDE 253>XP_006720085 Length = 704 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HFLVLVDE 9 H+LV VDE Sbjct: 273 HYLVAVDE 280>XP_006720084 Length = 730 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HFLVLVDE 9 H+LV VDE Sbjct: 273 HYLVAVDE 280>XP_005266301 Length = 527 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AH LVL DE Sbjct: 243 AHTLVLTDE 251>XP_005266299 Length = 551 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AH LVL DE Sbjct: 267 AHTLVLTDE 275>XP_006719822 Length = 551 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AH LVL DE Sbjct: 267 AHTLVLTDE 275>XP_006719821 Length = 561 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AH LVL DE Sbjct: 277 AHTLVLTDE 285>NP_059127 Length = 489 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 HFLVLVDE 9 H LVLVDE Sbjct: 453 HRLVLVDE 460>NP_001025162 Length = 478 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HFLVLVD 8 HFLVLV+ Sbjct: 290 HFLVLVE 296>NP_073571 Length = 456 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HFLVLVD 8 HFLVLV+ Sbjct: 290 HFLVLVE 296>NP_001161337 Length = 384 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AHFLVL + Sbjct: 134 AHFLVLASD 142>NP_060085 Length = 385 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AHFLVL + Sbjct: 134 AHFLVLASD 142>NP_055772 Length = 1198 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HFLVLVD 8 HFLVL D Sbjct: 63 HFLVLTD 69>XP_006720300 Length = 320 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HFLVLVD 8 HFLVLV+ Sbjct: 132 HFLVLVE 138>XP_006720299 Length = 320 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HFLVLVD 8 HFLVLV+ Sbjct: 132 HFLVLVE 138>XP_006720298 Length = 447 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HFLVLVD 8 HFLVLV+ Sbjct: 290 HFLVLVE 296>XP_005269985 Length = 316 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AHFLVL + Sbjct: 134 AHFLVLASD 142>XP_005250899 Length = 1218 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HFLVLVD 8 HFLVL D Sbjct: 143 HFLVLTD 149>XP_005250898 Length = 1226 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HFLVLVD 8 HFLVL D Sbjct: 143 HFLVLTD 149>XP_005250897 Length = 1244 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HFLVLVD 8 HFLVL D Sbjct: 143 HFLVLTD 149>XP_005250896 Length = 1278 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HFLVLVD 8 HFLVL D Sbjct: 143 HFLVLTD 149>XP_005250895 Length = 1296 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HFLVLVD 8 HFLVL D Sbjct: 143 HFLVLTD 149>NP_803879 Length = 741 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AHFL VD+ Sbjct: 606 AHFLEAVDD 614>NP_803881 Length = 739 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AHFL VD+ Sbjct: 606 AHFLEAVDD 614>NP_001258992 Length = 741 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AHFL VD+ Sbjct: 606 AHFLEAVDD 614>NP_110428 Length = 741 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AHFL VD+ Sbjct: 606 AHFLEAVDD 614>NP_001229291 Length = 757 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AHFL VD+ Sbjct: 622 AHFLEAVDD 630>NP_001258991 Length = 741 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AHFL VD+ Sbjct: 606 AHFLEAVDD 614>NP_001092270 Length = 739 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AHFL VD+ Sbjct: 606 AHFLEAVDD 614>NP_001258990 Length = 757 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AHFL VD+ Sbjct: 622 AHFLEAVDD 630>XP_006726908 Length = 185 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AHFL VD+ Sbjct: 52 AHFLEAVDD 60>XP_005276770 Length = 187 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AHFL VD+ Sbjct: 52 AHFLEAVDD 60>XP_006724671 Length = 741 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AHFL VD+ Sbjct: 606 AHFLEAVDD 614>XP_006724670 Length = 741 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 AHFL VD+ Sbjct: 606 AHFLEAVDD 614>XP_005254968 Length = 1156 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AHFLVLVDE 9 AH+LVL D+ Sbjct: 603 AHYLVLGDK 611>XP_005254967 Length = 1175 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AHFLVLVDE 9 AH+LVL D+ Sbjct: 603 AHYLVLGDK 611>XP_006720570 Length = 1181 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AHFLVLVDE 9 AH+LVL D+ Sbjct: 603 AHYLVLGDK 611>NP_006113 Length = 1150 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AHFLVLVDE 9 AH+LVL D+ Sbjct: 603 AHYLVLGDK 611>NP_001136105 Length = 880 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 HFLVLVDE 9 HFL+L+++ Sbjct: 54 HFLILLEQ 61>NP_055123 Length = 880 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 HFLVLVDE 9 HFL+L+++ Sbjct: 54 HFLILLEQ 61>XP_006726589 Length = 931 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HFLVLVD 8 HF VLVD Sbjct: 244 HFRVLVD 250>XP_005256637 Length = 879 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 HFLVLVDE 9 HFL+L+++ Sbjct: 54 HFLILLEQ 61>XP_005256636 Length = 880 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 HFLVLVDE 9 HFL+L+++ Sbjct: 54 HFLILLEQ 61>XP_006718462 Length = 4966 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HFLVLVD 8 HF VLVD Sbjct: 4269 HFRVLVD 4275>XP_006710010 Length = 1103 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HFLVLVD 8 HF VLVD Sbjct: 465 HFRVLVD 471>NP_000383 Length = 1545 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HFLVLVDE 9 HFL VDE Sbjct: 823 HFLPQVDE 830>NP_001138505 Length = 122 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HFLVLVDE 9 HF+ L DE Sbjct: 21 HFVCLADE 28>XP_006717694 Length = 895 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HFLVLVDE 9 HFL VDE Sbjct: 823 HFLPQVDE 830>XP_006717693 Length = 1313 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HFLVLVDE 9 HFL VDE Sbjct: 591 HFLPQVDE 598>NP_000543 Length = 2813 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AHFLVLVD 8 AH L LVD Sbjct: 1752 AHLLSLVD 1759>NP_079535 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 A LVL+DE Sbjct: 682 AQSLVLIDE 690>NP_751898 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 A LVL+DE Sbjct: 664 AQSLVLIDE 672>NP_002432 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 A LVL+DE Sbjct: 664 AQSLVLIDE 672>NP_751897 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 A LVL+DE Sbjct: 665 AQSLVLIDE 673>NP_066008 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AHFLVLVDE 9 +HF VL+ E Sbjct: 176 SHFRVLIHE 184>NP_758952 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HFLVLVDE 9 HF +LV+E Sbjct: 357 HFKLLVEE 364>NP_001159530 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HFLVLVD 8 HF+VL++ Sbjct: 23 HFIVLIN 29>NP_001020368 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HFLVLVDE 9 HF VL+ E Sbjct: 144 HFTVLIHE 151>NP_892014 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HFLVLVDE 9 HFL +DE Sbjct: 773 HFLEFMDE 780>NP_570718 Length = 754 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HFLVLVD 8 HF+VL++ Sbjct: 23 HFIVLIN 29>NP_001257310 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HFLVLVDE 9 HFL +DE Sbjct: 498 HFLEFMDE 505>XP_006718498 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HFLVLVDE 9 HFL +DE Sbjct: 369 HFLEFMDE 376>XP_005273831 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HFLVLVDE 9 HFL +DE Sbjct: 396 HFLEFMDE 403>XP_005273830 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HFLVLVDE 9 HFL +DE Sbjct: 540 HFLEFMDE 547>XP_005273828 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HFLVLVDE 9 HFL +DE Sbjct: 540 HFLEFMDE 547>XP_005273827 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HFLVLVDE 9 HFL +DE Sbjct: 540 HFLEFMDE 547>XP_005273826 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HFLVLVDE 9 HFL +DE Sbjct: 669 HFLEFMDE 676>XP_005273824 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HFLVLVDE 9 HFL +DE Sbjct: 694 HFLEFMDE 701>XP_005273823 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HFLVLVDE 9 HFL +DE Sbjct: 739 HFLEFMDE 746>XP_005273822 Length = 800 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HFLVLVDE 9 HFL +DE Sbjct: 781 HFLEFMDE 788>NP_003991 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HFLVLVDE 9 HF VL+ E Sbjct: 154 HFTVLIHE 161>NP_001020370 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HFLVLVDE 9 HF VL+ E Sbjct: 75 HFTVLIHE 82Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.149 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 498,896 Number of extensions: 854 Number of successful extensions: 81 Number of sequences better than 10000.0: 81 Number of HSP's gapped: 81 Number of HSP's successfully gapped: 81 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |