Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_067018 18 1135 NP_008915 18 1135 NP_001153572 18 1135 NP_955360 18 1135 NP_878268 18 1135 NP_001155973 18 1482 NP_055903 18 1482 NP_004432 18 1482 NP_001092007 17 2528 NP_689499 17 2528 NP_001298 17 2528 NP_001171952 17 2528 NP_001171951 17 2528 XP_005266139 17 2528 XP_005266136 17 2528 XP_006717167 17 2528 XP_006717166 17 2528 XP_006717165 17 2528 NP_064517 17 3301 NP_055220 17 3301 XP_006724095 17 3301 XP_006724093 17 3301 XP_006724092 17 3301 XP_005261217 17 3301 XP_005261216 17 3301 NP_114101 17 3301 NP_001032642 17 3301 NP_001191676 17 4312 NP_002904 17 4312 NP_001012780 17 4312 NP_001012777 17 4312 NP_612567 16 5631 NP_003257 16 5631 NP_612564 16 5631 NP_059115 16 5631 NP_036263 16 5631 XP_005260503 16 5631 XP_005260502 16 5631 NP_003042 16 7355 NP_001159968 16 7355 NP_004434 16 7355 NP_001161743 15 9605 NP_694547 15 9605 NP_115627 15 9605 NP_001167621 15 9605 NP_878899 15 9605 NP_001106873 15 9605 NP_001265341 15 9605 NP_001265340 15 9605 NP_085144 15 9605 NP_071896 15 9605 NP_060688 15 9605 NP_060829 15 9605 XP_006723678 15 9605 XP_006719118 15 9605 XP_006719117 15 9605 XP_006718583 15 9605 XP_006718582 15 9605 XP_005270105 15 9605 XP_006713597 15 9605 XP_006713596 15 9605 XP_006713595 15 9605 XP_006713594 15 9605 XP_005247222 15 9605 XP_005246148 15 9605 XP_005246145 15 9605 XP_006712675 15 9605 NP_653233 15 9605 NP_003236 15 9605>NP_067018 Length = 220 Score = 18.5 bits (36), Expect = 1135 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AGVIFVVSG 9 +G++FV+SG Sbjct: 121 SGIVFVISG 129>NP_008915 Length = 228 Score = 18.5 bits (36), Expect = 1135 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AGVIFVVSG 9 AG++F++SG Sbjct: 120 AGIVFILSG 128>NP_001153572 Length = 207 Score = 18.5 bits (36), Expect = 1135 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AGVIFVVSG 9 AG++F++SG Sbjct: 99 AGIVFILSG 107>NP_955360 Length = 225 Score = 18.5 bits (36), Expect = 1135 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AGVIFVVSG 9 AG+IF+++G Sbjct: 122 AGIIFIITG 130>NP_878268 Length = 226 Score = 18.5 bits (36), Expect = 1135 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AGVIFVVSG 9 AG++F++SG Sbjct: 118 AGIVFILSG 126>NP_001155973 Length = 1833 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGVIFVVSG 9 AGV FVVSG Sbjct: 353 AGVNFVVSG 361>NP_055903 Length = 1723 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGVIFVVSG 9 AGV FVVSG Sbjct: 353 AGVNFVVSG 361>NP_004432 Length = 984 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 AGVIFVVS 8 AGV+FVVS Sbjct: 548 AGVVFVVS 555>NP_001092007 Length = 1342 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGVIFVVSG 9 A ++FVVSG Sbjct: 519 ASILFVVSG 527>NP_689499 Length = 1317 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGVIFVVSG 9 A ++FVVSG Sbjct: 494 ASILFVVSG 502>NP_001298 Length = 211 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GVIFVVSG 9 G+IF+V+G Sbjct: 123 GIIFIVAG 130>NP_001171952 Length = 145 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GVIFVVSG 9 G+IF+V+G Sbjct: 123 GIIFIVAG 130>NP_001171951 Length = 211 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GVIFVVSG 9 G+IF+V+G Sbjct: 123 GIIFIVAG 130>XP_005266139 Length = 741 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGVIFVVSG 9 A ++FVVSG Sbjct: 520 ASILFVVSG 528>XP_005266136 Length = 953 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGVIFVVSG 9 A ++FVVSG Sbjct: 520 ASILFVVSG 528>XP_006717167 Length = 1309 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGVIFVVSG 9 A ++FVVSG Sbjct: 486 ASILFVVSG 494>XP_006717166 Length = 1316 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGVIFVVSG 9 A ++FVVSG Sbjct: 493 ASILFVVSG 501>XP_006717165 Length = 1343 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGVIFVVSG 9 A ++FVVSG Sbjct: 520 ASILFVVSG 528>NP_064517 Length = 376 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GVIFVVSG 9 G +FVVSG Sbjct: 18 GFVFVVSG 25>NP_055220 Length = 327 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AGVIFVVSG 9 AG++FV +G Sbjct: 141 AGILFVAAG 149>XP_006724095 Length = 265 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GVIFVVSG 9 G +FVVSG Sbjct: 18 GFVFVVSG 25>XP_006724093 Length = 376 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GVIFVVSG 9 G +FVVSG Sbjct: 18 GFVFVVSG 25>XP_006724092 Length = 376 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GVIFVVSG 9 G +FVVSG Sbjct: 18 GFVFVVSG 25>XP_005261217 Length = 376 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GVIFVVSG 9 G +FVVSG Sbjct: 18 GFVFVVSG 25>XP_005261216 Length = 463 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GVIFVVSG 9 G +FVVSG Sbjct: 105 GFVFVVSG 112>NP_114101 Length = 425 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AGVIFVVSG 9 AG++FV +G Sbjct: 162 AGILFVAAG 170>NP_001032642 Length = 376 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GVIFVVSG 9 G +FVVSG Sbjct: 18 GFVFVVSG 25>NP_001191676 Length = 1148 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GVIFVVSG 9 G+IFV++G Sbjct: 409 GLIFVITG 416>NP_002904 Length = 1147 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GVIFVVSG 9 G+IFV++G Sbjct: 409 GLIFVITG 416>NP_001012780 Length = 485 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AGVIFVVSG 9 AGVIFV G Sbjct: 108 AGVIFVDEG 116>NP_001012777 Length = 515 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AGVIFVVSG 9 AGVIFV G Sbjct: 108 AGVIFVDEG 116>NP_612567 Length = 639 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AGVIFVV 7 AG+IF+V Sbjct: 564 AGIIFIV 570>NP_003257 Length = 799 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AGVIFVV 7 AG+IF+V Sbjct: 724 AGIIFIV 730>NP_612564 Length = 839 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AGVIFVV 7 AG+IF+V Sbjct: 764 AGIIFIV 770>NP_059115 Length = 505 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AGVIFVV 7 AG+IFV+ Sbjct: 251 AGIIFVI 257>NP_036263 Length = 224 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 AGVIFVVSG 9 +GV+F+++G Sbjct: 122 SGVLFILTG 130>XP_005260503 Length = 153 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GVIFVVSG 9 G+IFV+ G Sbjct: 80 GIIFVLEG 87>XP_005260502 Length = 271 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GVIFVVSG 9 G+IFV+ G Sbjct: 80 GIIFVLEG 87>NP_003042 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GVIFVVSG 9 GV+ ++SG Sbjct: 427 GVVLIISG 434>NP_001159968 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GVIFVVSG 9 GV+ ++SG Sbjct: 427 GVVLIISG 434>NP_004434 Length = 998 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AGVIFVVS 8 AG++FVV+ Sbjct: 566 AGLVFVVA 573>NP_001161743 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AGVIFVVS 8 AG++FVV+ Sbjct: 267 AGLLFVVT 274>NP_694547 Length = 814 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AGVIFVVS 8 AG++FVV+ Sbjct: 271 AGLLFVVT 278>NP_115627 Length = 1476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AGVIFVVSG 9 AGV+ +SG Sbjct: 183 AGVVLALSG 191>NP_001167621 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GVIFVV 7 GVIFVV Sbjct: 91 GVIFVV 96>NP_878899 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GVIFVV 7 GVIFVV Sbjct: 91 GVIFVV 96>NP_001106873 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGVIFVVSG 9 +GVI +VSG Sbjct: 182 SGVIALVSG 190>NP_001265341 Length = 240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGVIFVVSG 9 +GVI +VSG Sbjct: 164 SGVIALVSG 172>NP_001265340 Length = 240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGVIFVVSG 9 +GVI +VSG Sbjct: 164 SGVIALVSG 172>NP_085144 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AGVIFVVSG 9 AGV +VSG Sbjct: 120 AGVTSIVSG 128>NP_071896 Length = 800 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GVIFVVSG 9 GVI V+SG Sbjct: 400 GVIKVISG 407>NP_060688 Length = 1247 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGVIFVVS 8 AGVIF+ S Sbjct: 696 AGVIFINS 703>NP_060829 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GVIFVVSG 9 G+I+VV G Sbjct: 276 GMIYVVQG 283>XP_006723678 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGVIFVVS 8 AG+IFV S Sbjct: 185 AGIIFVGS 192>XP_006719118 Length = 240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGVIFVVSG 9 +GVI +VSG Sbjct: 164 SGVIALVSG 172>XP_006719117 Length = 209 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGVIFVVSG 9 +GVI +VSG Sbjct: 133 SGVIALVSG 141>XP_006718583 Length = 1482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AGVIFVVSG 9 AGV+ +SG Sbjct: 105 AGVVLALSG 113>XP_006718582 Length = 1560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AGVIFVVSG 9 AGV+ +SG Sbjct: 183 AGVVLALSG 191>XP_005270105 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GVIFVVSG 9 GVI V+SG Sbjct: 400 GVIKVISG 407>XP_006713597 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GVIFVV 7 GVIFVV Sbjct: 66 GVIFVV 71>XP_006713596 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GVIFVV 7 GVIFVV Sbjct: 66 GVIFVV 71>XP_006713595 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GVIFVV 7 GVIFVV Sbjct: 76 GVIFVV 81>XP_006713594 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GVIFVV 7 GVIFVV Sbjct: 76 GVIFVV 81>XP_005247222 Length = 814 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AGVIFVVS 8 AG++FVV+ Sbjct: 271 AGLLFVVT 278>XP_005246148 Length = 1108 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGVIFVVS 8 AGVIF+ S Sbjct: 557 AGVIFINS 564>XP_005246145 Length = 1236 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGVIFVVS 8 AGVIF+ S Sbjct: 685 AGVIFINS 692>XP_006712675 Length = 1248 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGVIFVVS 8 AGVIF+ S Sbjct: 697 AGVIFINS 704>NP_653233 Length = 229 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AGVIFVVSG 9 AG++F+V G Sbjct: 214 AGLLFLVVG 222>NP_003236 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGVIFVVS 8 AG+IFV S Sbjct: 160 AGIIFVGS 167Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.150 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 397,395 Number of extensions: 972 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |