Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 20 509 NP_001035957 20 509 XP_006721990 20 509 XP_006721989 20 509 XP_005258041 20 509 XP_006721988 20 509 XP_006721987 20 509 XP_006721986 20 509 XP_005258040 20 509 XP_006721985 20 509 NP_758424 17 3301 NP_061142 17 3301 NP_036218 17 4312 XP_005247022 17 4312 NP_940980 16 5631 NP_001393 16 5631 XP_006721915 16 5631 XP_005268686 16 5631 NP_055418 16 5631 NP_008982 16 7355 NP_001241872 16 7355 NP_001129069 16 7355 NP_060554 16 7355 NP_001070254 16 7355 NP_001139008 16 7355 XP_006718388 16 7355 XP_006718387 16 7355 XP_006718386 16 7355 XP_005264480 16 7355 XP_005264478 16 7355 XP_005264475 16 7355 NP_056487 16 7355 NP_001136245 15 9605 NP_001136239 15 9605 NP_001136236 15 9605 NP_001136244 15 9605 NP_001136238 15 9605 NP_001136240 15 9605 NP_001136243 15 9605 NP_001136242 15 9605 NP_001136235 15 9605 NP_001136237 15 9605 NP_001136241 15 9605 NP_149045 15 9605 NP_001165375 15 9605 NP_055518 15 9605 NP_075068 15 9605 XP_006720191 15 9605 XP_006718013 15 9605 XP_006715405 15 9605 XP_005276812 15 9605 XP_005276811 15 9605 XP_006713490 15 9605 XP_005276810 15 9605 XP_005276809 15 9605 XP_006713489 15 9605 XP_005276808 15 9605 NP_612638 15 9605 NP_631981 15 9605>NP_000258 Length = 2818 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGTTLLEQN 9 AGT LLEQN Sbjct: 2312 AGTALLEQN 2320>NP_001035957 Length = 2839 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGTTLLEQN 9 AGT LLEQN Sbjct: 2333 AGTALLEQN 2341>XP_006721990 Length = 2823 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGTTLLEQN 9 AGT LLEQN Sbjct: 2343 AGTALLEQN 2351>XP_006721989 Length = 2823 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGTTLLEQN 9 AGT LLEQN Sbjct: 2343 AGTALLEQN 2351>XP_005258041 Length = 2836 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGTTLLEQN 9 AGT LLEQN Sbjct: 2312 AGTALLEQN 2320>XP_006721988 Length = 2846 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGTTLLEQN 9 AGT LLEQN Sbjct: 2322 AGTALLEQN 2330>XP_006721987 Length = 2849 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGTTLLEQN 9 AGT LLEQN Sbjct: 2343 AGTALLEQN 2351>XP_006721986 Length = 2854 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGTTLLEQN 9 AGT LLEQN Sbjct: 2330 AGTALLEQN 2338>XP_005258040 Length = 2857 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGTTLLEQN 9 AGT LLEQN Sbjct: 2333 AGTALLEQN 2341>XP_006721985 Length = 2867 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGTTLLEQN 9 AGT LLEQN Sbjct: 2343 AGTALLEQN 2351>NP_758424 Length = 1642 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GTTLLEQN 9 G TLL+QN Sbjct: 733 GATLLQQN 740>NP_061142 Length = 1642 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GTTLLEQN 9 G TLL+QN Sbjct: 733 GATLLQQN 740>NP_036218 Length = 886 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TTLLEQN 9 TTL+EQN Sbjct: 410 TTLVEQN 416>XP_005247022 Length = 494 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TTLLEQN 9 TTL+EQN Sbjct: 18 TTLVEQN 24>NP_940980 Length = 2527 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TTLLEQN 9 +TLLEQN Sbjct: 423 STLLEQN 429>NP_001393 Length = 462 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AGTTLLE 7 +GTTLLE Sbjct: 224 SGTTLLE 230>XP_006721915 Length = 456 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GTTLLEQN 9 G TLLE+N Sbjct: 35 GKTLLERN 42>XP_005268686 Length = 2521 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TTLLEQN 9 +TLLEQN Sbjct: 423 STLLEQN 429>NP_055418 Length = 465 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GTTLLEQN 9 G TLLE+N Sbjct: 35 GKTLLERN 42>NP_008982 Length = 650 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TLLEQN 9 TLLEQN Sbjct: 28 TLLEQN 33>NP_001241872 Length = 1796 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TLLEQN 9 TLLEQN Sbjct: 1339 TLLEQN 1344>NP_001129069 Length = 1870 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TLLEQN 9 TLLEQN Sbjct: 1339 TLLEQN 1344>NP_060554 Length = 1843 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TLLEQN 9 TLLEQN Sbjct: 1340 TLLEQN 1345>NP_001070254 Length = 1735 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGTTLLEQ 8 +GTTLL Q Sbjct: 17 SGTTLLPQ 24>NP_001139008 Length = 190 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GTTLLE 7 GTTLLE Sbjct: 87 GTTLLE 92>XP_006718388 Length = 1331 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGTTLLEQ 8 +GTTLL Q Sbjct: 80 SGTTLLPQ 87>XP_006718387 Length = 1798 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGTTLLEQ 8 +GTTLL Q Sbjct: 80 SGTTLLPQ 87>XP_006718386 Length = 1822 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGTTLLEQ 8 +GTTLL Q Sbjct: 80 SGTTLLPQ 87>XP_005264480 Length = 1842 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TLLEQN 9 TLLEQN Sbjct: 1339 TLLEQN 1344>XP_005264478 Length = 1844 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TLLEQN 9 TLLEQN Sbjct: 1340 TLLEQN 1345>XP_005264475 Length = 2027 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TLLEQN 9 TLLEQN Sbjct: 1340 TLLEQN 1345>NP_056487 Length = 1639 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AGTTLLE 7 AG+TLLE Sbjct: 1143 AGSTLLE 1149>NP_001136245 Length = 1932 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AGTTLLE 7 AGTT+L+ Sbjct: 812 AGTTILQ 818>NP_001136239 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AGTTLLE 7 AGTT+L+ Sbjct: 797 AGTTILQ 803>NP_001136236 Length = 1957 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AGTTLLE 7 AGTT+L+ Sbjct: 834 AGTTILQ 840>NP_001136244 Length = 1677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AGTTLLE 7 AGTT+L+ Sbjct: 834 AGTTILQ 840>NP_001136238 Length = 1952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AGTTLLE 7 AGTT+L+ Sbjct: 834 AGTTILQ 840>NP_001136240 Length = 1935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AGTTLLE 7 AGTT+L+ Sbjct: 812 AGTTILQ 818>NP_001136243 Length = 1682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AGTTLLE 7 AGTT+L+ Sbjct: 839 AGTTILQ 845>NP_001136242 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AGTTLLE 7 AGTT+L+ Sbjct: 834 AGTTILQ 840>NP_001136235 Length = 1962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AGTTLLE 7 AGTT+L+ Sbjct: 839 AGTTILQ 845>NP_001136237 Length = 1886 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AGTTLLE 7 AGTT+L+ Sbjct: 763 AGTTILQ 769>NP_001136241 Length = 1790 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AGTTLLE 7 AGTT+L+ Sbjct: 846 AGTTILQ 852>NP_149045 Length = 1955 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AGTTLLE 7 AGTT+L+ Sbjct: 834 AGTTILQ 840>NP_001165375 Length = 1506 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTLLEQ 8 TTLLEQ Sbjct: 15 TTLLEQ 20>NP_055518 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTLLEQ 8 TTLLEQ Sbjct: 15 TTLLEQ 20>NP_075068 Length = 1146 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTLLEQ 8 TTLLEQ Sbjct: 511 TTLLEQ 516>XP_006720191 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AGTTLLEQN 9 AGT L QN Sbjct: 529 AGTELCSQN 537>XP_006718013 Length = 1778 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AGTTLLE 7 AGTT+L+ Sbjct: 834 AGTTILQ 840>XP_006715405 Length = 133 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GTTLLEQN 9 G T+LE+N Sbjct: 114 GKTILERN 121>XP_005276812 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTLLEQ 8 TTLLEQ Sbjct: 15 TTLLEQ 20>XP_005276811 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTLLEQ 8 TTLLEQ Sbjct: 15 TTLLEQ 20>XP_006713490 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTLLEQ 8 TTLLEQ Sbjct: 15 TTLLEQ 20>XP_005276810 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTLLEQ 8 TTLLEQ Sbjct: 15 TTLLEQ 20>XP_005276809 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTLLEQ 8 TTLLEQ Sbjct: 15 TTLLEQ 20>XP_006713489 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTLLEQ 8 TTLLEQ Sbjct: 15 TTLLEQ 20>XP_005276808 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTLLEQ 8 TTLLEQ Sbjct: 15 TTLLEQ 20>NP_612638 Length = 182 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GTTLLEQN 9 G T+LE+N Sbjct: 114 GKTILERN 121>NP_631981 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTLLEQ 8 TTLLEQ Sbjct: 511 TTLLEQ 516Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.119 0.300 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 553,022 Number of extensions: 712 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |