Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 869 NP_671714 19 869 XP_006715890 19 869 XP_005250160 19 869 XP_005250159 19 869 NP_001166935 17 4312 NP_060111 17 4312 NP_001166934 17 4312 NP_001166936 17 4312 NP_079526 17 4312 NP_060066 17 4312 NP_001239029 17 4312 NP_001239032 17 4312 NP_001239031 17 4312 XP_006719559 17 4312 XP_006719558 17 4312 XP_005269072 17 4312 XP_005269071 17 4312 XP_005269070 17 4312 XP_006719557 17 4312 XP_005269069 17 4312 XP_006719556 17 4312 XP_005269068 17 4312 XP_005269067 17 4312 XP_005269066 17 4312 XP_005269065 17 4312 XP_005269064 17 4312 NP_000708 16 7355 NP_001275958 16 7355 NP_001270144 16 7355 NP_963892 16 7355 NP_958802 16 7355 NP_001270058 16 7355 XP_006724194 16 7355 XP_006724193 16 7355 XP_006724191 16 7355 XP_006724190 16 7355 XP_005261279 16 7355 XP_006724189 16 7355 XP_005257696 16 7355 XP_005255214 16 7355 XP_006718611 16 7355 XP_006718610 16 7355 NP_001034841 16 7355 NP_061869 15 9605 NP_001136112 15 9605 XP_006726522 15 9605 XP_006722063 15 9605 XP_006722062 15 9605 XP_006722061 15 9605 XP_006722060 15 9605 XP_005257605 15 9605 XP_005257604 15 9605 XP_006722059 15 9605>NP_005742 Length = 3907 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 AG QINLQS Sbjct: 2802 AGIQINLQS 2810>NP_671714 Length = 3899 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 AG QINLQS Sbjct: 2794 AGIQINLQS 2802>XP_006715890 Length = 3860 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 AG QINLQS Sbjct: 2755 AGIQINLQS 2763>XP_005250160 Length = 3939 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 AG QINLQS Sbjct: 2834 AGIQINLQS 2842>XP_005250159 Length = 3952 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 AG QINLQS Sbjct: 2847 AGIQINLQS 2855>NP_001166935 Length = 1674 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 215 ASTQMNVQS 223>NP_060111 Length = 1661 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 215 ASTQMNVQS 223>NP_001166934 Length = 1637 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 215 ASTQMNVQS 223>NP_001166936 Length = 1621 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 215 ASTQMNVQS 223>NP_079526 Length = 523 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GTQINLQ 8 GT++NLQ Sbjct: 352 GTEVNLQ 358>NP_060066 Length = 1624 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 214 ASTQMNVQS 222>NP_001239029 Length = 1637 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 214 ASTQMNVQS 222>NP_001239032 Length = 1610 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 214 ASTQMNVQS 222>NP_001239031 Length = 1623 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 214 ASTQMNVQS 222>XP_006719559 Length = 1650 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 215 ASTQMNVQS 223>XP_006719558 Length = 1644 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 215 ASTQMNVQS 223>XP_005269072 Length = 1607 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 215 ASTQMNVQS 223>XP_005269071 Length = 1614 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 215 ASTQMNVQS 223>XP_005269070 Length = 1627 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 215 ASTQMNVQS 223>XP_006719557 Length = 1631 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 215 ASTQMNVQS 223>XP_005269069 Length = 1632 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 215 ASTQMNVQS 223>XP_006719556 Length = 1655 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 215 ASTQMNVQS 223>XP_005269068 Length = 1657 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 215 ASTQMNVQS 223>XP_005269067 Length = 1662 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 215 ASTQMNVQS 223>XP_005269066 Length = 1668 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 215 ASTQMNVQS 223>XP_005269065 Length = 1670 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 215 ASTQMNVQS 223>XP_005269064 Length = 1675 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 A TQ+N+QS Sbjct: 215 ASTQMNVQS 223>NP_000708 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AGTQIN 6 AGTQ+N Sbjct: 172 AGTQVN 177>NP_001275958 Length = 269 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 AGT++ LQS Sbjct: 7 AGTELLLQS 15>NP_001270144 Length = 198 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AGTQINLQ 8 AGT +N+Q Sbjct: 41 AGTPVNVQ 48>NP_963892 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 AGT++ LQS Sbjct: 7 AGTELLLQS 15>NP_958802 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 AGT++ LQS Sbjct: 7 AGTELLLQS 15>NP_001270058 Length = 317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AGTQINLQ 8 AGT +N+Q Sbjct: 41 AGTPVNVQ 48>XP_006724194 Length = 210 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AGTQINLQ 8 AGT +N+Q Sbjct: 41 AGTPVNVQ 48>XP_006724193 Length = 211 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AGTQINLQ 8 AGT +N+Q Sbjct: 41 AGTPVNVQ 48>XP_006724191 Length = 243 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AGTQINLQ 8 AGT +N+Q Sbjct: 41 AGTPVNVQ 48>XP_006724190 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AGTQINLQ 8 AGT +N+Q Sbjct: 41 AGTPVNVQ 48>XP_005261279 Length = 255 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AGTQINLQ 8 AGT +N+Q Sbjct: 41 AGTPVNVQ 48>XP_006724189 Length = 289 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AGTQINLQ 8 AGT +N+Q Sbjct: 41 AGTPVNVQ 48>XP_005257696 Length = 336 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AGTQIN 6 AGTQ+N Sbjct: 196 AGTQVN 201>XP_005255214 Length = 303 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 AGT++ LQS Sbjct: 7 AGTELLLQS 15>XP_006718611 Length = 433 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GTQINLQ 8 GT +NLQ Sbjct: 258 GTMVNLQ 264>XP_006718610 Length = 489 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GTQINLQ 8 GT +NLQ Sbjct: 314 GTMVNLQ 320>NP_001034841 Length = 541 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GTQINLQ 8 GT +NLQ Sbjct: 366 GTMVNLQ 372>NP_061869 Length = 1690 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AGTQIN 6 AGTQ+N Sbjct: 783 AGTQLN 788>NP_001136112 Length = 1726 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AGTQIN 6 AGTQ+N Sbjct: 783 AGTQLN 788>XP_006726522 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGTQINLQS 9 AGT++ LQS Sbjct: 7 AGTKLLLQS 15>XP_006722063 Length = 1923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AGTQIN 6 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_006722062 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AGTQIN 6 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_006722061 Length = 1913 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AGTQIN 6 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_006722060 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AGTQIN 6 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_005257605 Length = 1926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AGTQIN 6 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_005257604 Length = 1962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AGTQIN 6 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_006722059 Length = 1965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AGTQIN 6 AGTQ+N Sbjct: 1019 AGTQLN 1024Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.117 0.290 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 395,342 Number of extensions: 430 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |