Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_208382 18 1482 NP_062552 17 2528 NP_001156806 17 2528 NP_620135 17 2528 NP_001156807 17 2528 NP_003314 17 4312 XP_006723412 17 4312 XP_006723411 17 4312 XP_006723410 17 4312 XP_006723409 17 4312 XP_006723408 17 4312 NP_001243224 16 5631 NP_005230 16 5631 XP_005260992 16 5631 NP_671725 16 7355 NP_757379 16 7355 NP_001242953 16 7355 NP_067049 16 7355 NP_001242954 16 7355 NP_004432 16 7355 XP_006710418 16 7355 NP_001278086 15 9605 NP_004422 15 9605 NP_001181876 15 9605 NP_937887 15 9605 NP_937884 15 9605 NP_004944 15 9605 NP_001181875 15 9605 NP_937885 15 9605 NP_886553 15 9605 NP_001231293 15 9605 NP_660350 15 9605 NP_001269870 15 9605 NP_001073948 15 9605 NP_001120926 15 9605 NP_001120925 15 9605 NP_001185731 15 9605 NP_001185730 15 9605 NP_004394 15 9605 NP_003751 15 9605 NP_001171164 15 9605 XP_005261469 15 9605 XP_006717758 15 9605 XP_005248625 15 9605 XP_006714732 15 9605 XP_005245809 15 9605 XP_005245808 15 9605 XP_006709999 15 9605 NP_055107 15 9605>NP_208382 Length = 648 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AGFEKKQRT 9 AGFEK +RT Sbjct: 282 AGFEKLRRT 290>NP_062552 Length = 689 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AGFEKKQR 8 AGF+K+QR Sbjct: 404 AGFKKQQR 411>NP_001156806 Length = 752 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 GFEKKQRT 9 G EKKQRT Sbjct: 458 GDEKKQRT 465>NP_620135 Length = 730 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 GFEKKQRT 9 G EKKQRT Sbjct: 436 GDEKKQRT 443>NP_001156807 Length = 730 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 GFEKKQRT 9 G EKKQRT Sbjct: 436 GDEKKQRT 443>NP_003314 Length = 520 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FEKKQR 8 FEKKQR Sbjct: 32 FEKKQR 37>XP_006723412 Length = 512 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FEKKQR 8 FEKKQR Sbjct: 46 FEKKQR 51>XP_006723411 Length = 531 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FEKKQR 8 FEKKQR Sbjct: 32 FEKKQR 37>XP_006723410 Length = 531 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FEKKQR 8 FEKKQR Sbjct: 32 FEKKQR 37>XP_006723409 Length = 542 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FEKKQR 8 FEKKQR Sbjct: 46 FEKKQR 51>XP_006723408 Length = 545 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FEKKQR 8 FEKKQR Sbjct: 46 FEKKQR 51>NP_001243224 Length = 609 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AGFEKKQR 8 +GF+K+QR Sbjct: 228 SGFKKEQR 235>NP_005230 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AGFEKKQR 8 +GF+K+QR Sbjct: 88 SGFKKEQR 95>XP_005260992 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AGFEKKQR 8 +GF+K+QR Sbjct: 88 SGFKKEQR 95>NP_671725 Length = 382 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AGFEKKQRT 9 A F KKQR+ Sbjct: 124 AKFRKKQRS 132>NP_757379 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AGFEKKQRT 9 A F KKQR+ Sbjct: 119 AKFRKKQRS 127>NP_001242953 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGFEKKQRT 9 AG+ KKQR+ Sbjct: 41 AGWLKKQRS 49>NP_067049 Length = 698 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGFEKKQRT 9 AG+ KKQR+ Sbjct: 41 AGWLKKQRS 49>NP_001242954 Length = 704 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AGFEKKQRT 9 AG+ KKQR+ Sbjct: 47 AGWLKKQRS 55>NP_004432 Length = 984 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AGFEKKQR 8 AG+ +KQR Sbjct: 655 AGYSEKQR 662>XP_006710418 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AGFEKKQRT 9 A F KKQR+ Sbjct: 119 AKFRKKQRS 127>NP_001278086 Length = 1559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FEKKQR 8 FEKKQ+ Sbjct: 821 FEKKQK 826>NP_004422 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AGFEKKQR 8 AG+ +KQR Sbjct: 650 AGYTEKQR 657>NP_001181876 Length = 1606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FEKKQR 8 FEKKQ+ Sbjct: 868 FEKKQK 873>NP_937887 Length = 1512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FEKKQR 8 FEKKQ+ Sbjct: 774 FEKKQK 779>NP_937884 Length = 1599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FEKKQR 8 FEKKQ+ Sbjct: 861 FEKKQK 866>NP_004944 Length = 1404 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FEKKQR 8 FEKKQ+ Sbjct: 666 FEKKQK 671>NP_001181875 Length = 1606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FEKKQR 8 FEKKQ+ Sbjct: 868 FEKKQK 873>NP_937885 Length = 1435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FEKKQR 8 FEKKQ+ Sbjct: 697 FEKKQK 702>NP_886553 Length = 1600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FEKKQR 8 FEKKQ+ Sbjct: 862 FEKKQK 867>NP_001231293 Length = 1392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GFEKKQ 7 GFEK+Q Sbjct: 151 GFEKEQ 156>NP_660350 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FEKKQRT 9 FE K+RT Sbjct: 90 FESKERT 96>NP_001269870 Length = 163 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FEKKQRT 9 FE K+RT Sbjct: 90 FESKERT 96>NP_001073948 Length = 1731 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GFEKKQ 7 GFEK+Q Sbjct: 464 GFEKEQ 469>NP_001120926 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEKKQR 8 GFE K+R Sbjct: 79 GFENKKR 85>NP_001120925 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEKKQR 8 GFE K+R Sbjct: 243 GFENKKR 249>NP_001185731 Length = 1591 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FEKKQR 8 FEKKQ+ Sbjct: 861 FEKKQK 866>NP_001185730 Length = 1621 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FEKKQR 8 FEKKQ+ Sbjct: 891 FEKKQK 896>NP_004394 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEKKQR 8 GFE K+R Sbjct: 243 GFENKKR 249>NP_003751 Length = 1585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FEKKQR 8 FEKKQ+ Sbjct: 855 FEKKQK 860>NP_001171164 Length = 1705 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GFEKKQ 7 GFEK+Q Sbjct: 464 GFEKEQ 469>XP_005261469 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AGFEKKQR 8 A FE+K+R Sbjct: 55 AAFEQKER 62>XP_006717758 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FEKKQRT 9 FE K+RT Sbjct: 90 FESKERT 96>XP_005248625 Length = 1418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GFEKKQ 7 GFEK+Q Sbjct: 151 GFEKEQ 156>XP_006714732 Length = 1633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GFEKKQ 7 GFEK+Q Sbjct: 366 GFEKEQ 371>XP_005245809 Length = 922 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AGFEKKQR 8 AG+ +KQR Sbjct: 596 AGYTEKQR 603>XP_005245808 Length = 965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AGFEKKQR 8 AG+ +KQR Sbjct: 639 AGYTEKQR 646>XP_006709999 Length = 266 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 GFEKKQR 8 GF+++QR Sbjct: 16 GFDRRQR 22>NP_055107 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AGFEKKQR 8 A FE+K+R Sbjct: 55 AAFEQKER 62Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.126 0.337 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 734,864 Number of extensions: 1178 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |