Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 665 NP_001075109 19 665 NP_071401 17 4312 NP_001273561 17 4312 NP_001273560 17 4312 XP_006719923 17 4312 XP_006719922 17 4312 XP_005266558 17 4312 XP_006719921 17 4312 XP_005266556 17 4312 XP_005266555 17 4312 XP_006719920 17 4312 XP_005266554 17 4312 XP_005266553 17 4312 XP_006719919 17 4312 XP_005266551 17 4312 XP_005266550 17 4312 XP_005266549 17 4312 XP_006719918 17 4312 XP_005266548 17 4312 NP_001025054 16 7355 NP_115878 16 7355 NP_055704 16 7355 NP_001229236 16 7355 NP_001229238 16 7355 XP_006717425 16 7355 XP_005252402 16 7355 NP_001006642 15 9605 NP_001252543 15 9605 NP_001006643 15 9605 NP_054831 15 9605 NP_443133 15 9605 NP_001269832 15 9605 NP_001269831 15 9605 XP_005251746 15 9605 XP_006717012 15 9605 XP_006717011 15 9605 XP_005251745 15 9605 XP_005251106 15 9605 XP_006716688 15 9605 XP_006716687 15 9605 XP_006713081 15 9605>NP_008835 Length = 4128 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AFTASDRQT 9 A TASDRQT Sbjct: 918 ALTASDRQT 926>NP_001075109 Length = 4097 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AFTASDRQT 9 A TASDRQT Sbjct: 918 ALTASDRQT 926>NP_071401 Length = 980 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFTASDRQ 8 AFT SDR+ Sbjct: 870 AFTESDRE 877>NP_001273561 Length = 983 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFTASDRQ 8 AFT SDR+ Sbjct: 873 AFTESDRE 880>NP_001273560 Length = 1009 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFTASDRQ 8 AFT SDR+ Sbjct: 899 AFTESDRE 906>XP_006719923 Length = 734 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFTASDRQ 8 AFT SDR+ Sbjct: 624 AFTESDRE 631>XP_006719922 Length = 942 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFTASDRQ 8 AFT SDR+ Sbjct: 912 AFTESDRE 919>XP_005266558 Length = 980 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFTASDRQ 8 AFT SDR+ Sbjct: 870 AFTESDRE 877>XP_006719921 Length = 983 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFTASDRQ 8 AFT SDR+ Sbjct: 873 AFTESDRE 880>XP_005266556 Length = 995 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFTASDRQ 8 AFT SDR+ Sbjct: 885 AFTESDRE 892>XP_005266555 Length = 998 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFTASDRQ 8 AFT SDR+ Sbjct: 888 AFTESDRE 895>XP_006719920 Length = 999 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFTASDRQ 8 AFT SDR+ Sbjct: 912 AFTESDRE 919>XP_005266554 Length = 1000 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFTASDRQ 8 AFT SDR+ Sbjct: 912 AFTESDRE 919>XP_005266553 Length = 1007 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFTASDRQ 8 AFT SDR+ Sbjct: 897 AFTESDRE 904>XP_006719919 Length = 1009 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFTASDRQ 8 AFT SDR+ Sbjct: 899 AFTESDRE 906>XP_005266551 Length = 1012 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFTASDRQ 8 AFT SDR+ Sbjct: 902 AFTESDRE 909>XP_005266550 Length = 1017 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFTASDRQ 8 AFT SDR+ Sbjct: 907 AFTESDRE 914>XP_005266549 Length = 1019 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFTASDRQ 8 AFT SDR+ Sbjct: 909 AFTESDRE 916>XP_006719918 Length = 1021 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFTASDRQ 8 AFT SDR+ Sbjct: 911 AFTESDRE 918>XP_005266548 Length = 1022 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFTASDRQ 8 AFT SDR+ Sbjct: 912 AFTESDRE 919>NP_001025054 Length = 1288 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TASDRQ 8 TASDRQ Sbjct: 1193 TASDRQ 1198>NP_115878 Length = 543 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FTASDRQT 9 FT ++RQT Sbjct: 157 FTVTERQT 164>NP_055704 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AFTASD 6 AFTASD Sbjct: 137 AFTASD 142>NP_001229236 Length = 1038 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AFTASD 6 AFTASD Sbjct: 137 AFTASD 142>NP_001229238 Length = 939 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AFTASD 6 AFTASD Sbjct: 105 AFTASD 110>XP_006717425 Length = 867 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AFTASD 6 AFTASD Sbjct: 137 AFTASD 142>XP_005252402 Length = 971 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AFTASD 6 AFTASD Sbjct: 137 AFTASD 142>NP_001006642 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FTASDRQT 9 FT +RQT Sbjct: 210 FTVEERQT 217>NP_001252543 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FTASDRQT 9 FT +RQT Sbjct: 208 FTVEERQT 215>NP_001006643 Length = 489 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FTASDRQT 9 FT +RQT Sbjct: 196 FTVEERQT 203>NP_054831 Length = 1294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AFTASDRQT 9 +FTA+D Q+ Sbjct: 711 SFTAADTQS 719>NP_443133 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FTASDRQT 9 FT +RQT Sbjct: 176 FTVEERQT 183>NP_001269832 Length = 1287 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AFTASDRQT 9 +FTA+D Q+ Sbjct: 704 SFTAADTQS 712>NP_001269831 Length = 1285 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AFTASDRQT 9 +FTA+D Q+ Sbjct: 702 SFTAADTQS 710>XP_005251746 Length = 366 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FTASDRQT 9 FT +RQT Sbjct: 73 FTVEERQT 80>XP_006717012 Length = 378 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FTASDRQT 9 FT +RQT Sbjct: 85 FTVEERQT 92>XP_006717011 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FTASDRQT 9 FT +RQT Sbjct: 188 FTVEERQT 195>XP_005251745 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FTASDRQT 9 FT +RQT Sbjct: 222 FTVEERQT 229>XP_005251106 Length = 1281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AFTASDRQT 9 +FTA+D Q+ Sbjct: 698 SFTAADTQS 706>XP_006716688 Length = 1294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AFTASDRQT 9 +FTA+D Q+ Sbjct: 711 SFTAADTQS 719>XP_006716687 Length = 1294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AFTASDRQT 9 +FTA+D Q+ Sbjct: 711 SFTAADTQS 719>XP_006713081 Length = 3964 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AFTASDRQT 9 AFT+ RQT Sbjct: 2857 AFTSGFRQT 2865Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.113 0.292 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 385,392 Number of extensions: 391 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |