Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 299 NP_001075109 20 299 NP_079303 18 1482 XP_005259334 18 1482 XP_005259333 18 1482 NP_057331 17 4312 NP_001091681 17 4312 NP_001091683 17 4312 NP_001091682 17 4312 NP_000852 17 4312 NP_002654 16 5631 NP_001230037 16 5631 XP_005256754 16 5631 XP_005256753 16 5631 XP_006721611 16 5631 XP_006721610 16 5631 NP_003985 16 7355 NP_000890 16 7355 NP_001230175 16 7355 NP_005622 16 7355 NP_996806 16 7355 NP_071751 16 7355 NP_001139761 16 7355 XP_005271167 16 7355 NP_000531 15 9605 NP_001036188 15 9605 NP_000113 15 9605 NP_001269158 15 9605 NP_001269155 15 9605 NP_001269156 15 9605 NP_001269154 15 9605 NP_001269157 15 9605 NP_954646 15 9605 NP_620132 15 9605 NP_001166983 15 9605 NP_065789 15 9605 NP_872434 15 9605 NP_001073949 15 9605 XP_006723382 15 9605 XP_006723381 15 9605 XP_006723380 15 9605 XP_006717381 15 9605 XP_005252359 15 9605 XP_006715063 15 9605 XP_006715062 15 9605 XP_006713686 15 9605 XP_006713685 15 9605 XP_006713684 15 9605 XP_006713683 15 9605 XP_006713682 15 9605 XP_006713681 15 9605 XP_006713680 15 9605 XP_005247488 15 9605 XP_005263675 15 9605>NP_008835 Length = 4128 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AFRDYVAVS 9 AFRDYVAV+ Sbjct: 4073 AFRDYVAVA 4081>NP_001075109 Length = 4097 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AFRDYVAVS 9 AFRDYVAV+ Sbjct: 4042 AFRDYVAVA 4050>NP_079303 Length = 792 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AFRDYVAVS 9 AFRDY A+S Sbjct: 548 AFRDYSALS 556>XP_005259334 Length = 702 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AFRDYVAVS 9 AFRDY A+S Sbjct: 458 AFRDYSALS 466>XP_005259333 Length = 792 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AFRDYVAVS 9 AFRDY A+S Sbjct: 548 AFRDYSALS 556>NP_057331 Length = 1241 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FRDYVA 7 FRDY+A Sbjct: 354 FRDYIA 359>NP_001091681 Length = 487 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RDYVAVS 9 RDYVAV+ Sbjct: 319 RDYVAVN 325>NP_001091683 Length = 487 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RDYVAVS 9 RDYVAV+ Sbjct: 319 RDYVAVN 325>NP_001091682 Length = 487 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RDYVAVS 9 RDYVAV+ Sbjct: 319 RDYVAVN 325>NP_000852 Length = 487 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RDYVAVS 9 RDYVAV+ Sbjct: 319 RDYVAVN 325>NP_002654 Length = 933 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 AFRDYVAV 8 A+RDY+++ Sbjct: 728 AWRDYISI 735>NP_001230037 Length = 922 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 AFRDYVAV 8 A+RDY+++ Sbjct: 728 AWRDYISI 735>XP_005256754 Length = 513 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 AFRDYVAV 8 A+RDY+++ Sbjct: 308 AWRDYISI 315>XP_005256753 Length = 548 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 AFRDYVAV 8 A+RDY+++ Sbjct: 343 AWRDYISI 350>XP_006721611 Length = 790 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 AFRDYVAV 8 A+RDY+++ Sbjct: 585 AWRDYISI 592>XP_006721610 Length = 933 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 AFRDYVAV 8 A+RDY+++ Sbjct: 728 AWRDYISI 735>NP_003985 Length = 245 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AFRDYVAVS 9 AF+D+V S Sbjct: 150 AFKDFVVAS 158>NP_000890 Length = 273 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AFRDYVAVS 9 AF+D+V S Sbjct: 150 AFKDFVVAS 158>NP_001230175 Length = 804 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRDYVAV 8 FRDY A+ Sbjct: 609 FRDYSAI 615>NP_005622 Length = 787 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AFRDYV 6 +FRDYV Sbjct: 483 SFRDYV 488>NP_996806 Length = 372 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRDYVAV 8 FRDY A+ Sbjct: 265 FRDYAAM 271>NP_071751 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRDYVAV 8 FRDY A+ Sbjct: 609 FRDYSAI 615>NP_001139761 Length = 697 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRDYVAV 8 FRDY A+ Sbjct: 609 FRDYSAI 615>XP_005271167 Length = 400 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRDYVAV 8 FRDY A+ Sbjct: 273 FRDYSAI 279>NP_000531 Length = 5038 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AFRDYV 6 AF+DYV Sbjct: 4075 AFQDYV 4080>NP_001036188 Length = 5033 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AFRDYV 6 AF+DYV Sbjct: 4070 AFQDYV 4075>NP_000113 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FRDYVAV 8 +R+YVA+ Sbjct: 519 YREYVAI 525>NP_001269158 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 FRDYV 6 FRDYV Sbjct: 104 FRDYV 108>NP_001269155 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 FRDYV 6 FRDYV Sbjct: 224 FRDYV 228>NP_001269156 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 FRDYV 6 FRDYV Sbjct: 182 FRDYV 186>NP_001269154 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 FRDYV 6 FRDYV Sbjct: 224 FRDYV 228>NP_001269157 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 FRDYV 6 FRDYV Sbjct: 182 FRDYV 186>NP_954646 Length = 201 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FRDYVAVS 9 FR+Y+A S Sbjct: 15 FRNYLAAS 22>NP_620132 Length = 262 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FRDYVAVS 9 FR+Y+A S Sbjct: 15 FRNYLAAS 22>NP_001166983 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FRDYVAVS 9 FR+Y+A S Sbjct: 15 FRNYLAAS 22>NP_065789 Length = 1771 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 AFRDYVA 7 A+R+Y+A Sbjct: 1386 AYREYIA 1392>NP_872434 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 AFRDY 5 AFRDY Sbjct: 126 AFRDY 130>NP_001073949 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 FRDYVA 7 F+DY+A Sbjct: 203 FKDYIA 208>XP_006723382 Length = 5027 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AFRDYV 6 AF+DYV Sbjct: 4064 AFQDYV 4069>XP_006723381 Length = 5031 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AFRDYV 6 AF+DYV Sbjct: 4068 AFQDYV 4073>XP_006723380 Length = 5032 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AFRDYV 6 AF+DYV Sbjct: 4069 AFQDYV 4074>XP_006717381 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FRDYVAVS 9 FR+Y+A S Sbjct: 36 FRNYLAAS 43>XP_005252359 Length = 283 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FRDYVAVS 9 FR+Y+A S Sbjct: 36 FRNYLAAS 43>XP_006715063 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 FRDYVA 7 F+DY+A Sbjct: 203 FKDYIA 208>XP_006715062 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 FRDYVA 7 F+DY+A Sbjct: 171 FKDYIA 176>XP_006713686 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 AFRDY 5 AFRDY Sbjct: 126 AFRDY 130>XP_006713685 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 AFRDY 5 AFRDY Sbjct: 126 AFRDY 130>XP_006713684 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 AFRDY 5 AFRDY Sbjct: 126 AFRDY 130>XP_006713683 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 AFRDY 5 AFRDY Sbjct: 126 AFRDY 130>XP_006713682 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 AFRDY 5 AFRDY Sbjct: 126 AFRDY 130>XP_006713681 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 AFRDY 5 AFRDY Sbjct: 126 AFRDY 130>XP_006713680 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 AFRDY 5 AFRDY Sbjct: 126 AFRDY 130>XP_005247488 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 AFRDY 5 AFRDY Sbjct: 126 AFRDY 130>XP_005263675 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FRDYVAV 8 +R+YVA+ Sbjct: 455 YREYVAI 461Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.137 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 469,688 Number of extensions: 481 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |