Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115927 18 1482 XP_006715292 18 1482 NP_039253 17 4312 XP_005273544 17 4312 XP_005273543 17 4312 XP_005273542 17 4312 XP_006721993 16 5631 NP_057085 16 5631 NP_001019831 16 7355 NP_009049 16 7355 NP_003938 16 7355 NP_003250 16 7355 XP_006714558 16 7355 XP_006713880 16 7355 XP_006713879 16 7355 XP_006713878 16 7355 XP_006713877 16 7355 XP_006713876 16 7355 XP_006713875 16 7355 XP_006713874 16 7355 XP_006713873 16 7355 NP_001957 15 9605 NP_001245258 15 9605 NP_001245260 15 9605 NP_060587 15 9605 NP_683692 15 9605 NP_001159887 15 9605 NP_001245259 15 9605 NP_818932 15 9605 NP_036288 15 9605 XP_005260382 15 9605 XP_005260381 15 9605 XP_006723804 15 9605 XP_005260380 15 9605 XP_006723803 15 9605 XP_005260379 15 9605 XP_005260378 15 9605 XP_005260377 15 9605 XP_006723802 15 9605 XP_005260376 15 9605 XP_006723801 15 9605 XP_006723800 15 9605 XP_006723799 15 9605 XP_006723798 15 9605 XP_005270021 15 9605 XP_005270020 15 9605 XP_005270019 15 9605 XP_005248208 15 9605 XP_005248207 15 9605 XP_006714021 15 9605 XP_006713588 15 9605 XP_001718723 15 9605>NP_115927 Length = 1321 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AFLSTSTST 9 A LSTSTST Sbjct: 317 ALLSTSTST 325>XP_006715292 Length = 759 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AFLSTSTST 9 A LSTSTST Sbjct: 304 ALLSTSTST 312>NP_039253 Length = 296 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTSTST Sbjct: 222 LSTSTST 228>XP_005273544 Length = 692 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTSTST Sbjct: 222 LSTSTST 228>XP_005273543 Length = 695 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTSTST Sbjct: 222 LSTSTST 228>XP_005273542 Length = 700 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTSTST Sbjct: 222 LSTSTST 228>XP_006721993 Length = 551 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FLSTSTS 8 F+STSTS Sbjct: 241 FISTSTS 247>NP_057085 Length = 556 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FLSTSTS 8 F+STSTS Sbjct: 224 FISTSTS 230>NP_001019831 Length = 2986 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FLSTSTST 9 +LST TST Sbjct: 1153 YLSTHTST 1160>NP_009049 Length = 3097 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FLSTSTST 9 +LST TST Sbjct: 1161 YLSTHTST 1168>NP_003938 Length = 1663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FLSTSTST 9 +LST TST Sbjct: 1153 YLSTHTST 1160>NP_003250 Length = 924 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AFLSTSTST 9 AF++T+T+T Sbjct: 281 AFVATATAT 289>XP_006714558 Length = 2612 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FLSTSTST 9 +LST TST Sbjct: 676 YLSTHTST 683>XP_006713880 Length = 1530 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FLSTSTST 9 +LST TST Sbjct: 1155 YLSTHTST 1162>XP_006713879 Length = 1656 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FLSTSTST 9 +LST TST Sbjct: 1146 YLSTHTST 1153>XP_006713878 Length = 1665 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FLSTSTST 9 +LST TST Sbjct: 1155 YLSTHTST 1162>XP_006713877 Length = 2956 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FLSTSTST 9 +LST TST Sbjct: 1155 YLSTHTST 1162>XP_006713876 Length = 2966 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FLSTSTST 9 +LST TST Sbjct: 1133 YLSTHTST 1140>XP_006713875 Length = 2975 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FLSTSTST 9 +LST TST Sbjct: 1142 YLSTHTST 1149>XP_006713874 Length = 2979 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FLSTSTST 9 +LST TST Sbjct: 1146 YLSTHTST 1153>XP_006713873 Length = 2988 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FLSTSTST 9 +LST TST Sbjct: 1155 YLSTHTST 1162>NP_001957 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFLSTSTS 8 AFL T+TS Sbjct: 404 AFLCTNTS 411>NP_001245258 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTST+T Sbjct: 802 LSTSTTT 808>NP_001245260 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTST+T Sbjct: 701 LSTSTTT 707>NP_060587 Length = 1224 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AFLSTSTST 9 +FLS +TST Sbjct: 528 SFLSFATST 536>NP_683692 Length = 3051 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFLSTSTS 8 A +STSTS Sbjct: 2291 AMISTSTS 2298>NP_001159887 Length = 627 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFLSTSTS 8 AFL T+TS Sbjct: 308 AFLCTNTS 315>NP_001245259 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTST+T Sbjct: 623 LSTSTTT 629>NP_818932 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTST+T Sbjct: 701 LSTSTTT 707>NP_036288 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTST+T Sbjct: 803 LSTSTTT 809>XP_005260382 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTST+T Sbjct: 654 LSTSTTT 660>XP_005260381 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTST+T Sbjct: 666 LSTSTTT 672>XP_006723804 Length = 819 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTST+T Sbjct: 741 LSTSTTT 747>XP_005260380 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTST+T Sbjct: 763 LSTSTTT 769>XP_006723803 Length = 853 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTST+T Sbjct: 775 LSTSTTT 781>XP_005260379 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTST+T Sbjct: 789 LSTSTTT 795>XP_005260378 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTST+T Sbjct: 790 LSTSTTT 796>XP_005260377 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTST+T Sbjct: 791 LSTSTTT 797>XP_006723802 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTST+T Sbjct: 802 LSTSTTT 808>XP_005260376 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTST+T Sbjct: 802 LSTSTTT 808>XP_006723801 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTST+T Sbjct: 803 LSTSTTT 809>XP_006723800 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTST+T Sbjct: 803 LSTSTTT 809>XP_006723799 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTST+T Sbjct: 803 LSTSTTT 809>XP_006723798 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LSTST+T Sbjct: 838 LSTSTTT 844>XP_005270021 Length = 753 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AFLSTSTST 9 +FLS +TST Sbjct: 57 SFLSFATST 65>XP_005270020 Length = 965 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AFLSTSTST 9 +FLS +TST Sbjct: 269 SFLSFATST 277>XP_005270019 Length = 965 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AFLSTSTST 9 +FLS +TST Sbjct: 269 SFLSFATST 277>XP_005248208 Length = 3097 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFLSTSTS 8 A +STSTS Sbjct: 2291 AMISTSTS 2298>XP_005248207 Length = 3098 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFLSTSTS 8 A +STSTS Sbjct: 2291 AMISTSTS 2298>XP_006714021 Length = 3112 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFLSTSTS 8 A +STSTS Sbjct: 2291 AMISTSTS 2298>XP_006713588 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFLSTSTS 8 AFL T+TS Sbjct: 196 AFLCTNTS 203>XP_001718723 Length = 1091 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSTSTST 9 LST+TST Sbjct: 46 LSTATST 52Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.0996 0.229 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 288,967 Number of extensions: 359 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |