Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_006222 18 1482 NP_001070254 18 1482 XP_006718388 18 1482 XP_006718387 18 1482 XP_006718386 18 1482 NP_004501 17 3301 NP_004500 17 3301 NP_536349 17 3301 NP_056162 17 3301 NP_001171944 17 3301 XP_006712552 17 3301 XP_006712551 17 3301 XP_006712550 17 3301 XP_006712549 17 3301 XP_005246582 17 3301 NP_001004106 17 4312 NP_001004105 17 4312 NP_002073 17 4312 NP_689979 17 4312 XP_006714923 17 4312 XP_006714922 17 4312 XP_006714921 17 4312 NP_006599 16 7355 XP_006710360 16 7355 XP_005270444 16 7355 XP_006710359 16 7355 XP_005270442 16 7355 XP_005270441 16 7355 XP_005270440 16 7355 NP_060897 15 9605 NP_775822 15 9605 NP_510880 15 9605 NP_976063 15 9605 XP_006725260 15 9605 XP_005255432 15 9605 XP_006717062 15 9605 XP_006717061 15 9605 XP_005251851 15 9605 XP_005251850 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AFKRLGASV 9 AFKRLGAS+ Sbjct: 1072 AFKRLGASL 1080>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AFKRLGASV 9 AFKRLGAS+ Sbjct: 1072 AFKRLGASL 1080>NP_006222 Length = 2286 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 FKRLGASV 9 FKRLG+SV Sbjct: 1856 FKRLGSSV 1863>NP_001070254 Length = 1735 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AFKRLGASV 9 AF+RLG+SV Sbjct: 114 AFERLGSSV 122>XP_006718388 Length = 1331 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AFKRLGASV 9 AF+RLG+SV Sbjct: 177 AFERLGSSV 185>XP_006718387 Length = 1798 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AFKRLGASV 9 AF+RLG+SV Sbjct: 177 AFERLGSSV 185>XP_006718386 Length = 1822 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AFKRLGASV 9 AF+RLG+SV Sbjct: 177 AFERLGSSV 185>NP_004501 Length = 549 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AFKRLGAS 8 +FKR+GAS Sbjct: 102 SFKRVGAS 109>NP_004500 Length = 689 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AFKRLGAS 8 +FKR+GAS Sbjct: 102 SFKRVGAS 109>NP_536349 Length = 713 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AFKRLGAS 8 +FKR+GAS Sbjct: 102 SFKRVGAS 109>NP_056162 Length = 1052 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 FKRLGASV 9 FKR GASV Sbjct: 715 FKRRGASV 722>NP_001171944 Length = 555 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AFKRLGAS 8 +FKR+GAS Sbjct: 108 SFKRVGAS 115>XP_006712552 Length = 648 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AFKRLGAS 8 +FKR+GAS Sbjct: 108 SFKRVGAS 115>XP_006712551 Length = 669 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AFKRLGAS 8 +FKR+GAS Sbjct: 108 SFKRVGAS 115>XP_006712550 Length = 695 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AFKRLGAS 8 +FKR+GAS Sbjct: 108 SFKRVGAS 115>XP_006712549 Length = 713 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AFKRLGAS 8 +FKR+GAS Sbjct: 102 SFKRVGAS 109>XP_005246582 Length = 719 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AFKRLGAS 8 +FKR+GAS Sbjct: 108 SFKRVGAS 115>NP_001004106 Length = 576 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FKRLGASV 9 FKRLGA + Sbjct: 453 FKRLGAGM 460>NP_001004105 Length = 560 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FKRLGASV 9 FKRLGA + Sbjct: 453 FKRLGAGM 460>NP_002073 Length = 589 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FKRLGASV 9 FKRLGA + Sbjct: 453 FKRLGAGM 460>NP_689979 Length = 113 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AFKRLGA 7 AF+RLGA Sbjct: 7 AFRRLGA 13>XP_006714923 Length = 324 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FKRLGASV 9 FKRLGA + Sbjct: 188 FKRLGAGM 195>XP_006714922 Length = 557 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FKRLGASV 9 FKRLGA + Sbjct: 421 FKRLGAGM 428>XP_006714921 Length = 559 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FKRLGASV 9 FKRLGA + Sbjct: 423 FKRLGAGM 430>NP_006599 Length = 762 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AFKRLGASV 9 AF+RLG V Sbjct: 263 AFRRLGNGV 271>XP_006710360 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AFKRLGASV 9 AF+RLG V Sbjct: 263 AFRRLGNGV 271>XP_005270444 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AFKRLGASV 9 AF+RLG V Sbjct: 263 AFRRLGNGV 271>XP_006710359 Length = 720 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AFKRLGASV 9 AF+RLG V Sbjct: 221 AFRRLGNGV 229>XP_005270442 Length = 733 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AFKRLGASV 9 AF+RLG V Sbjct: 234 AFRRLGNGV 242>XP_005270441 Length = 762 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AFKRLGASV 9 AF+RLG V Sbjct: 263 AFRRLGNGV 271>XP_005270440 Length = 762 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AFKRLGASV 9 AF+RLG V Sbjct: 263 AFRRLGNGV 271>NP_060897 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFKRLGAS 8 A K+LGAS Sbjct: 20 AVKKLGAS 27>NP_775822 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AFKRLGASV 9 A RLGASV Sbjct: 139 AQNRLGASV 147>NP_510880 Length = 2054 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AFKRLG 6 AFKR+G Sbjct: 1925 AFKRIG 1930>NP_976063 Length = 2039 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AFKRLG 6 AFKR+G Sbjct: 1925 AFKRIG 1930>XP_006725260 Length = 621 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFKRLGAS 8 A K+LGAS Sbjct: 20 AVKKLGAS 27>XP_005255432 Length = 621 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AFKRLGAS 8 A K+LGAS Sbjct: 20 AVKKLGAS 27>XP_006717062 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AFKRLGASV 9 A RLGASV Sbjct: 81 AQNRLGASV 89>XP_006717061 Length = 872 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AFKRLGASV 9 A RLGASV Sbjct: 139 AQNRLGASV 147>XP_005251851 Length = 885 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AFKRLGASV 9 A RLGASV Sbjct: 139 AQNRLGASV 147>XP_005251850 Length = 886 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AFKRLGASV 9 A RLGASV Sbjct: 139 AQNRLGASV 147Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.136 0.363 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 411,763 Number of extensions: 534 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |