Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 20 509 NP_671714 20 509 XP_006715890 20 509 XP_005250160 20 509 XP_005250159 20 509 NP_001159605 17 4312 NP_001124295 16 5631 NP_001370 16 5631 NP_001230651 16 5631 NP_057296 16 5631 NP_001093157 16 5631 NP_001192188 16 5631 NP_694880 16 5631 NP_001268226 16 5631 NP_003783 16 5631 XP_006724969 16 5631 XP_006724968 16 5631 XP_006724967 16 5631 XP_006722744 16 5631 XP_006721181 16 5631 XP_006721180 16 5631 XP_006721147 16 5631 XP_006721138 16 5631 XP_006721137 16 5631 XP_006721090 16 5631 XP_006721089 16 5631 NP_000008 16 7355 NP_001189333 16 7355 NP_001188306 16 7355 NP_001173 16 7355 NP_919047 16 7355 NP_660288 16 7355 NP_110437 16 7355 NP_001139021 16 7355 NP_055516 16 7355 NP_001180418 16 7355 NP_001138945 16 7355 NP_653213 16 7355 XP_006722454 16 7355 XP_006722453 16 7355 XP_006722452 16 7355 XP_006722451 16 7355 XP_006722450 16 7355 XP_006722448 16 7355 XP_006722447 16 7355 XP_005250598 16 7355 NP_001166600 16 7355 NP_689637 15 9605 NP_071450 15 9605 XP_005262298 15 9605 XP_005257629 15 9605>NP_005742 Length = 3907 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AETLEMGKV 9 AETLEMG+V Sbjct: 925 AETLEMGEV 933>NP_671714 Length = 3899 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AETLEMGKV 9 AETLEMG+V Sbjct: 925 AETLEMGEV 933>XP_006715890 Length = 3860 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AETLEMGKV 9 AETLEMG+V Sbjct: 925 AETLEMGEV 933>XP_005250160 Length = 3939 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AETLEMGKV 9 AETLEMG+V Sbjct: 925 AETLEMGEV 933>XP_005250159 Length = 3952 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AETLEMGKV 9 AETLEMG+V Sbjct: 925 AETLEMGEV 933>NP_001159605 Length = 1976 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 +TLE+GKV Sbjct: 1954 KTLEVGKV 1961>NP_001124295 Length = 1632 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AETLEMG 7 AETLE+G Sbjct: 770 AETLEVG 776>NP_001370 Length = 1616 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AETLEMG 7 AETLE+G Sbjct: 754 AETLEVG 760>NP_001230651 Length = 124 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 69 ETLELGRL 76>NP_057296 Length = 124 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 69 ETLELGRL 76>NP_001093157 Length = 124 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 69 ETLELGRL 76>NP_001192188 Length = 124 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 69 ETLELGRL 76>NP_694880 Length = 139 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLEMGKV 9 TLE+GKV Sbjct: 74 TLEVGKV 80>NP_001268226 Length = 141 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLEMGKV 9 TLE+GKV Sbjct: 74 TLEVGKV 80>NP_003783 Length = 148 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLEMGKV 9 TLE+GKV Sbjct: 74 TLEVGKV 80>XP_006724969 Length = 124 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 69 ETLELGRL 76>XP_006724968 Length = 124 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 69 ETLELGRL 76>XP_006724967 Length = 132 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 69 ETLELGRL 76>XP_006722744 Length = 1495 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AETLEMG 7 AETLE+G Sbjct: 633 AETLEVG 639>XP_006721181 Length = 132 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 69 ETLELGRL 76>XP_006721180 Length = 132 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 69 ETLELGRL 76>XP_006721147 Length = 132 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 69 ETLELGRL 76>XP_006721138 Length = 102 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 69 ETLELGRL 76>XP_006721137 Length = 132 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 69 ETLELGRL 76>XP_006721090 Length = 102 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 69 ETLELGRL 76>XP_006721089 Length = 132 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 69 ETLELGRL 76>NP_000008 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 +TL+MG++ Sbjct: 266 QTLDMGRI 273>NP_001189333 Length = 502 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TLEMGKV 9 +LEMGK+ Sbjct: 160 SLEMGKI 166>NP_001188306 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TLEMGKV 9 +LEMGK+ Sbjct: 105 SLEMGKI 111>NP_001173 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TLEMGKV 9 +LEMGK+ Sbjct: 133 SLEMGKI 139>NP_919047 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ETLEMGKV 9 +TL MGKV Sbjct: 358 QTLVMGKV 365>NP_660288 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ETLEMGKV 9 ETLE G+V Sbjct: 396 ETLEKGQV 403>NP_110437 Length = 432 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AETLEMGKV 9 +ET+++GKV Sbjct: 237 SETVKIGKV 245>NP_001139021 Length = 324 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AETLEMGKV 9 +ET+++GKV Sbjct: 129 SETVKIGKV 137>NP_055516 Length = 1056 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ETLEMGK 8 ETL++GK Sbjct: 984 ETLQLGK 990>NP_001180418 Length = 1101 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ETLEMGK 8 ETL++GK Sbjct: 1029 ETLQLGK 1035>NP_001138945 Length = 512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 448 ETLELGEL 455>NP_653213 Length = 2211 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 2147 ETLELGEL 2154>XP_006722454 Length = 1144 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 1080 ETLELGEL 1087>XP_006722453 Length = 1162 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 1098 ETLELGEL 1105>XP_006722452 Length = 1162 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 1098 ETLELGEL 1105>XP_006722451 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 1142 ETLELGEL 1149>XP_006722450 Length = 1249 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 1240 ETLELGEL 1247>XP_006722448 Length = 1304 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 1240 ETLELGEL 1247>XP_006722447 Length = 1933 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 1869 ETLELGEL 1876>XP_005250598 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ETLEMGKV 9 +TL MGKV Sbjct: 295 QTLVMGKV 302>NP_001166600 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETLEMGKV 9 ETLE+G++ Sbjct: 448 ETLELGEL 455>NP_689637 Length = 1135 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AETLEM 6 AETLEM Sbjct: 899 AETLEM 904>NP_071450 Length = 865 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AETLEM 6 AETLEM Sbjct: 618 AETLEM 623>XP_005262298 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AETLEM 6 AETLEM Sbjct: 622 AETLEM 627>XP_005257629 Length = 833 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AETLEM 6 AETLEM Sbjct: 586 AETLEM 591Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.122 0.298 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 450,976 Number of extensions: 648 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |