Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 19 665 XP_006716142 19 665 XP_005250088 19 665 XP_006716141 19 665 XP_005250085 19 665 XP_006716140 19 665 XP_005250084 19 665 XP_005250083 19 665 XP_005250082 19 665 NP_004377 17 2528 XP_005259803 17 2528 XP_005259802 17 2528 NP_694590 17 3301 XP_005251848 17 3301 XP_006717060 17 3301 XP_005251847 17 3301 XP_005251846 17 3301 NP_004855 17 4312 XP_006718174 17 4312 XP_006710007 17 4312 NP_001259004 16 5631 NP_005144 16 5631 XP_006721395 16 5631 XP_006721394 16 5631 XP_006721393 16 5631 NP_001106197 16 7355 NP_055820 16 7355 XP_005267607 16 7355 NP_065805 15 9605 NP_659404 15 9605 NP_054799 15 9605 NP_001269536 15 9605 NP_787954 15 9605 NP_059130 15 9605 NP_003846 15 9605 NP_064502 15 9605 XP_006724792 15 9605 XP_005254520 15 9605 XP_005254478 15 9605 XP_005247728 15 9605 XP_006713777 15 9605 XP_005264097 15 9605 XP_005264096 15 9605 NP_631899 15 9605 NP_001070710 15 9605>NP_733751 Length = 4911 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AESATLRPQ 9 AESA LRPQ Sbjct: 4188 AESAALRPQ 4196>XP_006716142 Length = 4927 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AESATLRPQ 9 AESA LRPQ Sbjct: 4204 AESAALRPQ 4212>XP_005250088 Length = 4928 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AESATLRPQ 9 AESA LRPQ Sbjct: 4205 AESAALRPQ 4213>XP_006716141 Length = 4959 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AESATLRPQ 9 AESA LRPQ Sbjct: 4236 AESAALRPQ 4244>XP_005250085 Length = 4979 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AESATLRPQ 9 AESA LRPQ Sbjct: 4260 AESAALRPQ 4268>XP_006716140 Length = 4982 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AESATLRPQ 9 AESA LRPQ Sbjct: 4259 AESAALRPQ 4267>XP_005250084 Length = 4982 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AESATLRPQ 9 AESA LRPQ Sbjct: 4259 AESAALRPQ 4267>XP_005250083 Length = 4982 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AESATLRPQ 9 AESA LRPQ Sbjct: 4259 AESAALRPQ 4267>XP_005250082 Length = 4983 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AESATLRPQ 9 AESA LRPQ Sbjct: 4260 AESAALRPQ 4268>NP_004377 Length = 1321 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AESATLRPQ 9 AES TL PQ Sbjct: 854 AESTTLSPQ 862>XP_005259803 Length = 1321 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AESATLRPQ 9 AES TL PQ Sbjct: 854 AESTTLSPQ 862>XP_005259802 Length = 1321 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AESATLRPQ 9 AES TL PQ Sbjct: 854 AESTTLSPQ 862>NP_694590 Length = 342 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AESATLRPQ 9 AESA L PQ Sbjct: 82 AESALLEPQ 90>XP_005251848 Length = 332 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AESATLRPQ 9 AESA L PQ Sbjct: 109 AESALLEPQ 117>XP_006717060 Length = 343 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AESATLRPQ 9 AESA L PQ Sbjct: 83 AESALLEPQ 91>XP_005251847 Length = 368 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AESATLRPQ 9 AESA L PQ Sbjct: 108 AESALLEPQ 116>XP_005251846 Length = 369 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AESATLRPQ 9 AESA L PQ Sbjct: 109 AESALLEPQ 117>NP_004855 Length = 308 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AESATLRPQ 9 AES++ RPQ Sbjct: 171 AESSSARPQ 179>XP_006718174 Length = 427 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ESATLRP 8 +SATLRP Sbjct: 64 QSATLRP 70>XP_006710007 Length = 348 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ESATLRP 8 +SATLRP Sbjct: 64 QSATLRP 70>NP_001259004 Length = 802 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ESATLRP 8 ESATL+P Sbjct: 625 ESATLQP 631>NP_005144 Length = 798 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ESATLRP 8 ESATL+P Sbjct: 621 ESATLQP 627>XP_006721395 Length = 602 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ESATLRP 8 ESATL+P Sbjct: 425 ESATLQP 431>XP_006721394 Length = 715 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ESATLRP 8 ESATL+P Sbjct: 626 ESATLQP 632>XP_006721393 Length = 781 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ESATLRP 8 ESATL+P Sbjct: 626 ESATLQP 632>NP_001106197 Length = 1554 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AESATLRP 8 A SAT RP Sbjct: 603 ASSATFRP 610>NP_055820 Length = 1519 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AESATLRP 8 A SAT RP Sbjct: 533 ASSATFRP 540>XP_005267607 Length = 1589 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AESATLRP 8 A SAT RP Sbjct: 603 ASSATFRP 610>NP_065805 Length = 1444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ESATLRP 8 E AT+RP Sbjct: 337 EKATIRP 343>NP_659404 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SATLRPQ 9 +ATL+PQ Sbjct: 317 TATLKPQ 323>NP_054799 Length = 1548 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AESATLRPQ 9 AES L+PQ Sbjct: 812 AESLGLKPQ 820>NP_001269536 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SATLRPQ 9 +ATL+PQ Sbjct: 305 TATLKPQ 311>NP_787954 Length = 1551 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AESATLRPQ 9 AES L+PQ Sbjct: 808 AESLGLKPQ 816>NP_059130 Length = 1551 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AESATLRPQ 9 AES L+PQ Sbjct: 808 AESLGLKPQ 816>NP_003846 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AESATLRP 8 AES T RP Sbjct: 19 AESCTSRP 26>NP_064502 Length = 1176 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SATLRPQ 9 +ATLRP+ Sbjct: 291 AATLRPE 297>XP_006724792 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SATLRPQ 9 +ATL+PQ Sbjct: 181 TATLKPQ 187>XP_005254520 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AESATLRPQ 9 AES L+PQ Sbjct: 492 AESLGLKPQ 500>XP_005254478 Length = 1548 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AESATLRPQ 9 AES L+PQ Sbjct: 812 AESLGLKPQ 820>XP_005247728 Length = 1413 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ESATLRP 8 E AT+RP Sbjct: 306 EKATIRP 312>XP_006713777 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ESATLRP 8 E AT+RP Sbjct: 337 EKATIRP 343>XP_005264097 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AESATLRP 8 AES T RP Sbjct: 19 AESCTSRP 26>XP_005264096 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AESATLRP 8 AES T RP Sbjct: 19 AESCTSRP 26>NP_631899 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SATLRPQ 9 SATL PQ Sbjct: 182 SATLSPQ 188>NP_001070710 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SATLRPQ 9 SATL PQ Sbjct: 191 SATLSPQ 197Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.110 0.279 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 411,947 Number of extensions: 456 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |