Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 20 509 XP_006717990 20 509 XP_006717989 20 509 NP_001265045 17 4312 NP_001137435 17 4312 NP_076493 17 4312 NP_000416 17 4312 NP_001074012 16 5631 NP_067054 16 5631 NP_002369 16 5631 NP_001166144 16 5631 XP_005255915 16 5631 XP_005251238 16 5631 XP_005251237 16 5631 NP_620419 16 5631 NP_057079 16 5631 NP_001070 16 7355 NP_997402 16 7355 NP_110421 16 7355 NP_001139542 16 7355 NP_001139543 16 7355 NP_000740 16 7355 NP_000014 16 7355 NP_955378 16 7355 XP_005257631 16 7355 XP_006722077 16 7355 XP_005266617 16 7355 XP_005266615 16 7355 XP_005266614 16 7355 XP_005266613 16 7355 XP_006712792 16 7355 XP_006712791 16 7355 XP_005264072 16 7355 XP_006712070 16 7355 XP_005264349 16 7355 NP_116165 15 9605 NP_001269877 15 9605 NP_002935 15 9605 NP_937821 15 9605 NP_001026881 15 9605 NP_001161840 15 9605 NP_004472 15 9605 NP_065743 15 9605 XP_005269685 15 9605 XP_005269684 15 9605 XP_005269683 15 9605 XP_005269681 15 9605 XP_006717770 15 9605 XP_005269679 15 9605 XP_005251128 15 9605 XP_005251127 15 9605 XP_005251126 15 9605 XP_006715611 15 9605 XP_006714955 15 9605 XP_005265867 15 9605 XP_005265868 15 9605 XP_005265869 15 9605 XP_005265866 15 9605 XP_005265865 15 9605 XP_005265864 15 9605 NP_001124336 15 9605>NP_000305 Length = 403 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AERREGVYR 9 AER EGVYR Sbjct: 39 AERLEGVYR 47>XP_006717990 Length = 175 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AERREGVYR 9 AER EGVYR Sbjct: 39 AERLEGVYR 47>XP_006717989 Length = 388 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AERREGVYR 9 AER EGVYR Sbjct: 39 AERLEGVYR 47>NP_001265045 Length = 1257 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AERREGVYR 9 A+R +G+YR Sbjct: 105 AQRFQGIYR 113>NP_001137435 Length = 1248 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AERREGVYR 9 A+R +G+YR Sbjct: 100 AQRFQGIYR 108>NP_076493 Length = 1253 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AERREGVYR 9 A+R +G+YR Sbjct: 105 AQRFQGIYR 113>NP_000416 Length = 1257 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AERREGVYR 9 A+R +G+YR Sbjct: 105 AQRFQGIYR 113>NP_001074012 Length = 758 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ERREGV 7 ERREGV Sbjct: 389 ERREGV 394>NP_067054 Length = 758 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ERREGV 7 ERREGV Sbjct: 389 ERREGV 394>NP_002369 Length = 508 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AERREG 6 AERREG Sbjct: 7 AERREG 12>NP_001166144 Length = 409 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ERREGVYR 9 ++REGV+R Sbjct: 367 QQREGVWR 374>XP_005255915 Length = 1099 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RREGVYR 9 +R+GVYR Sbjct: 9 QRDGVYR 15>XP_005251238 Length = 160 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RREGVYR 9 ++EGVYR Sbjct: 101 QKEGVYR 107>XP_005251237 Length = 265 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RREGVYR 9 ++EGVYR Sbjct: 101 QKEGVYR 107>NP_620419 Length = 309 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RREGVYR 9 ++EGVYR Sbjct: 101 QKEGVYR 107>NP_057079 Length = 288 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AERREG 6 AERREG Sbjct: 81 AERREG 86>NP_001070 Length = 619 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 REGVYR 9 R+GVYR Sbjct: 353 RQGVYR 358>NP_997402 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 REGVYR 9 R+GVYR Sbjct: 46 RQGVYR 51>NP_110421 Length = 651 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RREGVYR 9 + EGVYR Sbjct: 185 KHEGVYR 191>NP_001139542 Length = 744 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RREGVYR 9 + EGVYR Sbjct: 278 KHEGVYR 284>NP_001139543 Length = 651 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RREGVYR 9 + EGVYR Sbjct: 185 KHEGVYR 191>NP_000740 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RREGVY 8 RR+GVY Sbjct: 213 RRDGVY 218>NP_000014 Length = 387 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RREGVY 8 R+EGVY Sbjct: 192 RKEGVY 197>NP_955378 Length = 129 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RREGVY 8 RREG+Y Sbjct: 60 RREGLY 65>XP_005257631 Length = 285 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RREGVY 8 R+EGVY Sbjct: 90 RKEGVY 95>XP_006722077 Length = 391 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RREGVY 8 R+EGVY Sbjct: 246 RKEGVY 251>XP_005266617 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RREGVYR 9 + EGVYR Sbjct: 185 KHEGVYR 191>XP_005266615 Length = 744 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RREGVYR 9 + EGVYR Sbjct: 278 KHEGVYR 284>XP_005266614 Length = 808 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RREGVYR 9 + EGVYR Sbjct: 278 KHEGVYR 284>XP_005266613 Length = 809 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RREGVYR 9 + EGVYR Sbjct: 278 KHEGVYR 284>XP_006712792 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 REGVYR 9 R+GVYR Sbjct: 46 RQGVYR 51>XP_006712791 Length = 584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 REGVYR 9 R+GVYR Sbjct: 353 RQGVYR 358>XP_005264072 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 REGVYR 9 R+GVYR Sbjct: 347 RQGVYR 352>XP_006712070 Length = 129 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RREGVY 8 RREG+Y Sbjct: 60 RREGLY 65>XP_005264349 Length = 129 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RREGVY 8 RREG+Y Sbjct: 60 RREGLY 65>NP_116165 Length = 2540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ERREGVY 8 ER+EG Y Sbjct: 1218 ERKEGSY 1224>NP_001269877 Length = 2358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ERREGVY 8 ER+EG Y Sbjct: 1036 ERKEGSY 1042>NP_002935 Length = 2347 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 REGVYR 9 R+G+YR Sbjct: 428 RDGIYR 433>NP_937821 Length = 357 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AERREGVYR 9 A+R++G Y+ Sbjct: 27 AQRQQGFYK 35>NP_001026881 Length = 290 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ERREGVYR 9 ERR+ +YR Sbjct: 244 ERRQPLYR 251>NP_001161840 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ERREGVYR 9 +RREG+ R Sbjct: 186 DRREGLIR 193>NP_004472 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ERREGVYR 9 +RREG+ R Sbjct: 199 DRREGLMR 206>NP_065743 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ERREGVYR 9 +RREG+ R Sbjct: 186 DRREGLIR 193>XP_005269685 Length = 1700 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ERREGVY 8 ER+EG Y Sbjct: 1218 ERKEGSY 1224>XP_005269684 Length = 2032 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ERREGVY 8 ER+EG Y Sbjct: 1218 ERKEGSY 1224>XP_005269683 Length = 2252 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ERREGVY 8 ER+EG Y Sbjct: 930 ERKEGSY 936>XP_005269681 Length = 2321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ERREGVY 8 ER+EG Y Sbjct: 999 ERKEGSY 1005>XP_006717770 Length = 2358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ERREGVY 8 ER+EG Y Sbjct: 1036 ERKEGSY 1042>XP_005269679 Length = 2502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ERREGVY 8 ER+EG Y Sbjct: 1180 ERKEGSY 1186>XP_005251128 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AERREGVYR 9 A+R+EG R Sbjct: 5 AQRKEGAVR 13>XP_005251127 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AERREGVYR 9 A+R+EG R Sbjct: 5 AQRKEGAVR 13>XP_005251126 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AERREGVYR 9 A+R+EG R Sbjct: 5 AQRKEGAVR 13>XP_006715611 Length = 2342 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 REGVYR 9 R+G+YR Sbjct: 437 RDGIYR 442>XP_006714955 Length = 198 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ERREGVYR 9 ERR+ +YR Sbjct: 152 ERRQPLYR 159>XP_005265867 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ERREGVYR 9 ++R+G+YR Sbjct: 505 KKRKGLYR 512>XP_005265868 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ERREGVYR 9 ++R+G+YR Sbjct: 505 KKRKGLYR 512>XP_005265869 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ERREGVYR 9 ++R+G+YR Sbjct: 505 KKRKGLYR 512>XP_005265866 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ERREGVYR 9 ++R+G+YR Sbjct: 505 KKRKGLYR 512>XP_005265865 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ERREGVYR 9 ++R+G+YR Sbjct: 505 KKRKGLYR 512>XP_005265864 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ERREGVYR 9 ++R+G+YR Sbjct: 505 KKRKGLYR 512>NP_001124336 Length = 755 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ERREGVYR 9 ++R+G+YR Sbjct: 722 KKRKGLYR 729Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.138 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 628,556 Number of extensions: 1079 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |