Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_006181 17 4312 XP_006712618 17 4312 XP_006710156 17 4312 NP_001129651 16 5631 NP_001129649 16 5631 NP_000390 16 5631 NP_001129650 16 5631 NP_001013421 16 5631 NP_002408 16 5631 NP_001165775 16 5631 NP_001139438 16 5631 NP_116233 16 5631 NP_001165774 16 5631 NP_054731 16 5631 NP_001363 16 5631 XP_005260461 16 5631 XP_006721530 16 5631 XP_006721529 16 5631 XP_006721528 16 5631 XP_005269647 16 5631 XP_006717583 16 5631 XP_005252689 16 5631 XP_005252688 16 5631 XP_006717582 16 5631 XP_005252687 16 5631 XP_006717581 16 5631 NP_689759 16 5631 NP_001161819 16 7355 NP_683759 16 7355 NP_060514 16 7355 NP_056273 16 7355 NP_001186947 16 7355 NP_036323 16 7355 NP_001186945 16 7355 XP_005277661 16 7355 NP_001245210 15 9605 NP_000242 15 9605 NP_001274103 15 9605 NP_000343 15 9605 NP_001139280 15 9605 NP_000623 15 9605 NP_001035247 15 9605 XP_006718349 15 9605 XP_006714391 15 9605 XP_006714390 15 9605 XP_005264389 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AELAKTPVH 9 AELAKTPV+ Sbjct: 3594 AELAKTPVN 3602>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AELAKTPVH 9 AELAKTPV+ Sbjct: 3594 AELAKTPVN 3602>NP_006181 Length = 577 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AELAKTP 7 +ELAKTP Sbjct: 111 SELAKTP 117>XP_006712618 Length = 577 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AELAKTP 7 +ELAKTP Sbjct: 111 SELAKTP 117>XP_006710156 Length = 343 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AELAKTPVH 9 A+ A+TP H Sbjct: 102 AQAARTPTH 110>NP_001129651 Length = 426 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AKTPVH 9 +KTPVH Sbjct: 281 SKTPVH 286>NP_001129649 Length = 476 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AKTPVH 9 +KTPVH Sbjct: 331 SKTPVH 336>NP_000390 Length = 476 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AKTPVH 9 +KTPVH Sbjct: 331 SKTPVH 336>NP_001129650 Length = 476 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AKTPVH 9 +KTPVH Sbjct: 331 SKTPVH 336>NP_001013421 Length = 361 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ELAKTPVH 9 ELAK P H Sbjct: 235 ELAKPPKH 242>NP_002408 Length = 3256 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AELAKTPV 8 AE+ KTPV Sbjct: 756 AEMFKTPV 763>NP_001165775 Length = 840 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELAKTPVH 9 ELA +P+H Sbjct: 366 ELALSPIH 373>NP_001139438 Length = 2896 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AELAKTPV 8 AE+ KTPV Sbjct: 396 AEMFKTPV 403>NP_116233 Length = 878 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELAKTPVH 9 ELA +P+H Sbjct: 366 ELALSPIH 373>NP_001165774 Length = 879 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELAKTPVH 9 ELA +P+H Sbjct: 366 ELALSPIH 373>NP_054731 Length = 298 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AKTPVH 9 AKTP+H Sbjct: 9 AKTPLH 14>NP_001363 Length = 4486 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AELAKTPVH 9 AEL +PVH Sbjct: 593 AELGFSPVH 601>XP_005260461 Length = 306 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AKTPVH 9 AKTP+H Sbjct: 9 AKTPLH 14>XP_006721530 Length = 2746 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AELAKTPVH 9 AEL +PVH Sbjct: 593 AELGFSPVH 601>XP_006721529 Length = 2817 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AELAKTPVH 9 AEL +PVH Sbjct: 593 AELGFSPVH 601>XP_006721528 Length = 3869 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AELAKTPVH 9 AEL +PVH Sbjct: 593 AELGFSPVH 601>XP_005269647 Length = 489 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AKTPVH 9 +KTPVH Sbjct: 344 SKTPVH 349>XP_006717583 Length = 803 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELAKTPVH 9 ELA +P+H Sbjct: 366 ELALSPIH 373>XP_005252689 Length = 807 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELAKTPVH 9 ELA +P+H Sbjct: 366 ELALSPIH 373>XP_005252688 Length = 841 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELAKTPVH 9 ELA +P+H Sbjct: 366 ELALSPIH 373>XP_006717582 Length = 850 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELAKTPVH 9 ELA +P+H Sbjct: 366 ELALSPIH 373>XP_005252687 Length = 883 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELAKTPVH 9 ELA +P+H Sbjct: 366 ELALSPIH 373>XP_006717581 Length = 884 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELAKTPVH 9 ELA +P+H Sbjct: 366 ELALSPIH 373>NP_689759 Length = 429 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LAKTPVH 9 LAK P+H Sbjct: 176 LAKKPIH 182>NP_001161819 Length = 470 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AELAKTPVH 9 AELA+ VH Sbjct: 104 AELARLKVH 112>NP_683759 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AELAKTPVH 9 AELA+ VH Sbjct: 104 AELARLKVH 112>NP_060514 Length = 429 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AELAKTPVH 9 AELA+ VH Sbjct: 104 AELARLKVH 112>NP_056273 Length = 549 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AELAKTP 7 AEL KTP Sbjct: 4 AELIKTP 10>NP_001186947 Length = 286 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AELAKTPVH 9 AEL PVH Sbjct: 58 AELTLEPVH 66>NP_036323 Length = 308 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AELAKTPVH 9 AEL PVH Sbjct: 80 AELTLEPVH 88>NP_001186945 Length = 286 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AELAKTPVH 9 AEL PVH Sbjct: 58 AELTLEPVH 66>XP_005277661 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AELAKTPVH 9 AELA+ VH Sbjct: 104 AELARLKVH 112>NP_001245210 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AELAKTPVH 9 AELA P H Sbjct: 765 AELANFPKH 773>NP_000242 Length = 934 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AELAKTPVH 9 AELA P H Sbjct: 831 AELANFPKH 839>NP_001274103 Length = 1582 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 ELAKTPVH 9 ++AK P+H Sbjct: 1409 DIAKLPLH 1416>NP_000343 Length = 1581 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 ELAKTPVH 9 ++AK P+H Sbjct: 1408 DIAKLPLH 1415>NP_001139280 Length = 1153 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AELAKTPV 8 AEL K PV Sbjct: 1013 AELRKAPV 1020>NP_000623 Length = 1152 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AELAKTPV 8 AEL K PV Sbjct: 1012 AELRKAPV 1019>NP_001035247 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AELAKTPVH 9 AEL K P H Sbjct: 380 AELLKCPNH 388>XP_006718349 Length = 1646 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 ELAKTPVH 9 ++AK P+H Sbjct: 1408 DIAKLPLH 1415>XP_006714391 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AELAKTPVH 9 AEL K P H Sbjct: 380 AELLKCPNH 388>XP_006714390 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AELAKTPVH 9 AEL K P H Sbjct: 380 AELLKCPNH 388>XP_005264389 Length = 921 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AELAKTPVH 9 AELA P H Sbjct: 831 AELANFPKH 839Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.121 0.343 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 633,232 Number of extensions: 557 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |