Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001261 19 665 NP_001262 19 665 XP_005271924 19 665 XP_005271923 19 665 NP_001138462 17 4312 NP_058633 17 4312 XP_006726390 17 4312 XP_006726389 17 4312 XP_006726388 17 4312 XP_006726387 17 4312 XP_006724562 17 4312 XP_005274609 17 4312 XP_006711142 17 4312 XP_006711141 17 4312 XP_006711140 17 4312 XP_006710131 17 4312 XP_006710130 17 4312 XP_006710129 17 4312 XP_006710128 17 4312 XP_006712175 16 5631 XP_005264643 16 5631 XP_006712174 16 5631 NP_115494 16 5631 NP_055761 16 7355 NP_955468 16 7355 NP_653259 16 7355 XP_005262425 16 7355 XP_005264573 16 7355 NP_036525 16 7355 NP_008986 15 9605 NP_000245 15 9605 NP_775267 15 9605 NP_775268 15 9605 NP_775266 15 9605 NP_004094 15 9605 NP_001271270 15 9605 NP_078613 15 9605 NP_001847 15 9605 NP_112598 15 9605 NP_001032251 15 9605 NP_036229 15 9605 NP_009201 15 9605 XP_005261936 15 9605 XP_005261935 15 9605 XP_005261934 15 9605 XP_005261933 15 9605 XP_006717660 15 9605 XP_005273505 15 9605 XP_005273504 15 9605 XP_006711832 15 9605 XP_005273200 15 9605 XP_005273198 15 9605 XP_005270538 15 9605 NP_055691 15 9605 NP_817114 15 9605 NP_004176 15 9605>NP_001261 Length = 1710 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 AEIRRFIK Sbjct: 1129 AEIRRFIK 1136>NP_001262 Length = 1828 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 AEIRRFIK Sbjct: 1134 AEIRRFIK 1141>XP_005271924 Length = 1710 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 AEIRRFIK Sbjct: 1129 AEIRRFIK 1136>XP_005271923 Length = 1798 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 AEIRRFIK Sbjct: 1129 AEIRRFIK 1136>NP_001138462 Length = 1742 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AEIRRFIKI 9 A I RF+KI Sbjct: 264 ANIERFVKI 272>NP_058633 Length = 1462 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EIRRFIK 8 +IRRFIK Sbjct: 1333 DIRRFIK 1339>XP_006726390 Length = 1353 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 AE+RRF++ Sbjct: 1031 AELRRFLR 1038>XP_006726389 Length = 1471 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 AE+RRF++ Sbjct: 1149 AELRRFLR 1156>XP_006726388 Length = 1489 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 AE+RRF++ Sbjct: 1167 AELRRFLR 1174>XP_006726387 Length = 1497 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 AE+RRF++ Sbjct: 1215 AELRRFLR 1222>XP_006724562 Length = 1326 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EIRRFIK 8 +IRRFIK Sbjct: 1197 DIRRFIK 1203>XP_005274609 Length = 1468 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EIRRFIK 8 +IRRFIK Sbjct: 1339 DIRRFIK 1345>XP_006711142 Length = 1471 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 AE+RRF++ Sbjct: 1149 AELRRFLR 1156>XP_006711141 Length = 1489 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 AE+RRF++ Sbjct: 1167 AELRRFLR 1174>XP_006711140 Length = 1497 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 AE+RRF++ Sbjct: 1215 AELRRFLR 1222>XP_006710131 Length = 1353 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 AE+RRF++ Sbjct: 1031 AELRRFLR 1038>XP_006710130 Length = 1471 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 AE+RRF++ Sbjct: 1149 AELRRFLR 1156>XP_006710129 Length = 1489 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 AE+RRF++ Sbjct: 1167 AELRRFLR 1174>XP_006710128 Length = 1497 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 AE+RRF++ Sbjct: 1215 AELRRFLR 1222>XP_006712175 Length = 170 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AEIRRFIKI 9 AEIRRF + Sbjct: 162 AEIRRFSSV 170>XP_005264643 Length = 334 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AEIRRFIKI 9 AEIRRF + Sbjct: 326 AEIRRFSSV 334>XP_006712174 Length = 349 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AEIRRFIKI 9 AEIRRF + Sbjct: 341 AEIRRFSSV 349>NP_115494 Length = 334 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AEIRRFIKI 9 AEIRRF + Sbjct: 326 AEIRRFSSV 334>NP_055761 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AEIRRFIK 8 A +RRFIK Sbjct: 495 AVLRRFIK 502>NP_955468 Length = 584 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AEIRRFIK 8 A +RRFIK Sbjct: 463 AVLRRFIK 470>NP_653259 Length = 2073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AEIRRFIK 8 AE+R+F K Sbjct: 2 AEVRKFTK 9>XP_005262425 Length = 2086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AEIRRFIK 8 AE+R+F K Sbjct: 2 AEVRKFTK 9>XP_005264573 Length = 615 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AEIRRFIK 8 A +RRFIK Sbjct: 494 AVLRRFIK 501>NP_036525 Length = 1338 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AEIRRFIK 8 AE+RRF K Sbjct: 1141 AELRRFRK 1148>NP_008986 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EIRRFIK 8 EI++FIK Sbjct: 968 EIKKFIK 974>NP_000245 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AEIRRFIKI 9 AE+R FI+I Sbjct: 265 AEMRPFIEI 273>NP_775267 Length = 967 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EIRRFIK 8 E+RRF K Sbjct: 182 ELRRFFK 188>NP_775268 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EIRRFIK 8 E+RRF K Sbjct: 182 ELRRFFK 188>NP_775266 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EIRRFIK 8 E+RRF K Sbjct: 182 ELRRFFK 188>NP_004094 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EIRRFIK 8 E+RRF K Sbjct: 182 ELRRFFK 188>NP_001271270 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRFIKI 9 RRF+KI Sbjct: 159 RRFVKI 164>NP_078613 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IRRFIKI 9 +RRF+K+ Sbjct: 229 VRRFLKL 235>NP_001847 Length = 1604 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EIRRFIK 8 EI+RFI+ Sbjct: 1438 EIKRFIR 1444>NP_112598 Length = 5088 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 AE+RR+++ Sbjct: 275 AEVRRYLE 282>NP_001032251 Length = 142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AEIRRFIKI 9 AEI +F+K+ Sbjct: 99 AEISQFLKL 107>NP_036229 Length = 179 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AEIRRFIKI 9 AEI +F+K+ Sbjct: 136 AEISQFLKL 144>NP_009201 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRFIKI 9 RRF+KI Sbjct: 106 RRFVKI 111>XP_005261936 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 +E+R+F+K Sbjct: 167 SELRKFLK 174>XP_005261935 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 +E+R+F+K Sbjct: 167 SELRKFLK 174>XP_005261934 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 +E+R+F+K Sbjct: 167 SELRKFLK 174>XP_005261933 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 +E+R+F+K Sbjct: 167 SELRKFLK 174>XP_006717660 Length = 1369 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EIRRFIK 8 EI++FIK Sbjct: 947 EIKKFIK 953>XP_005273505 Length = 997 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EIRRFIK 8 E+RRF K Sbjct: 182 ELRRFFK 188>XP_005273504 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EIRRFIK 8 E+RRF K Sbjct: 182 ELRRFFK 188>XP_006711832 Length = 1139 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AEIRRFIKI 9 AE+R FI+I Sbjct: 265 AEMRPFIEI 273>XP_005273200 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AEIRRFIKI 9 AE+R FI+I Sbjct: 265 AEMRPFIEI 273>XP_005273198 Length = 1264 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AEIRRFIKI 9 AE+R FI+I Sbjct: 264 AEMRPFIEI 272>XP_005270538 Length = 1588 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EIRRFIK 8 EI+RFI+ Sbjct: 1422 EIKRFIR 1428>NP_055691 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 AEIRRFIK 8 +E+R+F+K Sbjct: 167 SELRKFLK 174>NP_817114 Length = 142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AEIRRFIKI 9 AEI +F+K+ Sbjct: 99 AEISQFLKL 107>NP_004176 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IRRFIKI 9 +RRF+K+ Sbjct: 210 VRRFLKL 216Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.348 0.160 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 358,590 Number of extensions: 536 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |