Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005912 17 3301 XP_005248577 17 3301 XP_005248576 17 3301 NP_599023 16 5631 NP_599022 16 5631 NP_599024 16 5631 NP_002934 16 5631 NP_005051 16 5631 NP_001001523 16 5631 XP_005254641 16 5631 XP_005245481 16 5631 XP_006711547 16 5631 NP_001193865 16 7355 NP_001193895 16 7355 NP_001193858 16 7355 NP_001193869 16 7355 NP_001193861 16 7355 NP_001193883 16 7355 NP_001193863 16 7355 NP_001127 16 7355 NP_751947 16 7355 NP_056121 15 9605 NP_001095272 15 9605 NP_057705 15 9605 XP_005253027 15 9605 XP_006718311 15 9605 XP_006718310 15 9605 XP_005253024 15 9605 XP_005253022 15 9605 XP_005253021 15 9605 XP_005253020 15 9605 XP_005253019 15 9605 XP_005270747 15 9605 XP_006710574 15 9605 XP_005270746 15 9605>NP_005912 Length = 1512 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AEAIQLVVE 9 AEAIQL VE Sbjct: 866 AEAIQLGVE 874>XP_005248577 Length = 1349 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AEAIQLVVE 9 AEAIQL VE Sbjct: 703 AEAIQLGVE 711>XP_005248576 Length = 1375 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AEAIQLVVE 9 AEAIQL VE Sbjct: 729 AEAIQLGVE 737>NP_599023 Length = 523 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EAIQLVVE 9 EAIQ VVE Sbjct: 329 EAIQYVVE 336>NP_599022 Length = 556 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EAIQLVVE 9 EAIQ VVE Sbjct: 362 EAIQYVVE 369>NP_599024 Length = 468 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EAIQLVVE 9 EAIQ VVE Sbjct: 274 EAIQYVVE 281>NP_002934 Length = 548 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EAIQLVVE 9 EAIQ VVE Sbjct: 354 EAIQYVVE 361>NP_005051 Length = 518 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EAIQLVVE 9 EAIQ VVE Sbjct: 326 EAIQYVVE 333>NP_001001523 Length = 497 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EAIQLVVE 9 EAIQ VVE Sbjct: 305 EAIQYVVE 312>XP_005254641 Length = 477 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EAIQLVVE 9 EAIQ VVE Sbjct: 283 EAIQYVVE 290>XP_005245481 Length = 512 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EAIQLVVE 9 EAIQ VVE Sbjct: 320 EAIQYVVE 327>XP_006711547 Length = 572 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EAIQLVVE 9 EAIQ VVE Sbjct: 380 EAIQYVVE 387>NP_001193865 Length = 355 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EAIQLVVE 9 E +QLVVE Sbjct: 236 EEVQLVVE 243>NP_001193895 Length = 347 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EAIQLVVE 9 E +QLVVE Sbjct: 236 EEVQLVVE 243>NP_001193858 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EAIQLVVE 9 E +QLVVE Sbjct: 252 EEVQLVVE 259>NP_001193869 Length = 347 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EAIQLVVE 9 E +QLVVE Sbjct: 236 EEVQLVVE 243>NP_001193861 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EAIQLVVE 9 E +QLVVE Sbjct: 222 EEVQLVVE 229>NP_001193883 Length = 325 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EAIQLVVE 9 E +QLVVE Sbjct: 236 EEVQLVVE 243>NP_001193863 Length = 363 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EAIQLVVE 9 E +QLVVE Sbjct: 252 EEVQLVVE 259>NP_001127 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EAIQLVVE 9 E +QLVVE Sbjct: 236 EEVQLVVE 243>NP_751947 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EAIQLVVE 9 E +QLVVE Sbjct: 222 EEVQLVVE 229>NP_056121 Length = 2620 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EAIQLVV 8 EAIQL++ Sbjct: 841 EAIQLII 847>NP_001095272 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AEAIQLVVE 9 AEA+Q+V + Sbjct: 191 AEAVQIVAK 199>NP_057705 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AEAIQLVVE 9 AEA+Q+V + Sbjct: 191 AEAVQIVAK 199>XP_005253027 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AEAIQLVVE 9 AEA+Q+V + Sbjct: 191 AEAVQIVAK 199>XP_006718311 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AEAIQLVVE 9 AEA+Q+V + Sbjct: 146 AEAVQIVAK 154>XP_006718310 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AEAIQLVVE 9 AEA+Q+V + Sbjct: 191 AEAVQIVAK 199>XP_005253024 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AEAIQLVVE 9 AEA+Q+V + Sbjct: 190 AEAVQIVAK 198>XP_005253022 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AEAIQLVVE 9 AEA+Q+V + Sbjct: 191 AEAVQIVAK 199>XP_005253021 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AEAIQLVVE 9 AEA+Q+V + Sbjct: 191 AEAVQIVAK 199>XP_005253020 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AEAIQLVVE 9 AEA+Q+V + Sbjct: 191 AEAVQIVAK 199>XP_005253019 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AEAIQLVVE 9 AEA+Q+V + Sbjct: 191 AEAVQIVAK 199>XP_005270747 Length = 2025 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EAIQLVV 8 EAIQL++ Sbjct: 246 EAIQLII 252>XP_006710574 Length = 2445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EAIQLVV 8 EAIQL++ Sbjct: 666 EAIQLII 672>XP_005270746 Length = 2443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EAIQLVV 8 EAIQL++ Sbjct: 666 EAIQLII 672Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.128 0.283 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 254,452 Number of extensions: 199 Number of successful extensions: 35 Number of sequences better than 10000.0: 35 Number of HSP's gapped: 35 Number of HSP's successfully gapped: 35 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |