Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_940890 17 3301 NP_004746 17 3301 XP_006725153 17 3301 XP_006725152 17 3301 XP_006725151 17 3301 XP_006725150 17 3301 XP_005250947 17 3301 XP_005250946 17 3301 XP_005250945 17 3301 XP_005250944 17 3301 NP_940978 17 4312 XP_006710698 17 4312 XP_005244806 17 4312 XP_006710697 17 4312 XP_006710696 17 4312 NP_001157745 16 5631 NP_001074010 16 5631 NP_001026859 16 5631 NP_001252519 16 5631 NP_958831 16 5631 NP_001252518 16 5631 XP_005254311 16 5631 XP_006720508 16 5631 XP_006720507 16 5631 XP_005254310 16 5631 XP_005254309 16 5631 XP_005254306 16 5631 XP_005254305 16 5631 XP_005254304 16 5631 XP_005254303 16 5631 XP_006720506 16 5631 XP_005254302 16 5631 XP_005254301 16 5631 XP_006720505 16 5631 XP_005254300 16 5631 NP_001158145 16 7355 NP_000287 16 7355 NP_001009944 16 7355 NP_079172 16 7355 NP_001258791 16 7355 NP_001159756 16 7355 NP_006420 16 7355 NP_001009570 16 7355 NP_001159757 16 7355 NP_001257711 16 7355 NP_003192 16 7355 NP_653267 16 7355 NP_775787 16 7355 NP_001136113 16 7355 XP_006720958 16 7355 XP_006720957 16 7355 XP_005255427 16 7355 XP_006720956 16 7355 XP_006720955 16 7355 XP_006720954 16 7355 XP_006720953 16 7355 XP_006720952 16 7355 XP_006719805 16 7355 XP_005266236 16 7355 XP_005266235 16 7355 XP_005266234 16 7355 XP_005266233 16 7355 XP_006719804 16 7355 XP_005266232 16 7355 XP_005266231 16 7355 XP_005266230 16 7355 XP_005266229 16 7355 XP_005266228 16 7355 XP_005253228 16 7355 NP_109591 15 9605 NP_001273685 15 9605 NP_001805 15 9605 NP_037499 15 9605 XP_006715071 15 9605 XP_005248216 15 9605 XP_006714024 15 9605>NP_940890 Length = 1179 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLGRSGA 9 D LGRSG+ Sbjct: 821 DTLGRSGS 828>NP_004746 Length = 802 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLGRSGA 9 D+LG SGA Sbjct: 702 DILGSSGA 709>XP_006725153 Length = 1179 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLGRSGA 9 D LGRSG+ Sbjct: 821 DTLGRSGS 828>XP_006725152 Length = 1179 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLGRSGA 9 D LGRSG+ Sbjct: 821 DTLGRSGS 828>XP_006725151 Length = 1185 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLGRSGA 9 D LGRSG+ Sbjct: 827 DTLGRSGS 834>XP_006725150 Length = 1198 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLGRSGA 9 D LGRSG+ Sbjct: 840 DTLGRSGS 847>XP_005250947 Length = 1179 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLGRSGA 9 D LGRSG+ Sbjct: 821 DTLGRSGS 828>XP_005250946 Length = 1179 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLGRSGA 9 D LGRSG+ Sbjct: 821 DTLGRSGS 828>XP_005250945 Length = 1185 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLGRSGA 9 D LGRSG+ Sbjct: 827 DTLGRSGS 834>XP_005250944 Length = 1198 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLGRSGA 9 D LGRSG+ Sbjct: 840 DTLGRSGS 847>NP_940978 Length = 2045 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLGRSGA 9 V+GRSGA Sbjct: 369 VMGRSGA 375>XP_006710698 Length = 1907 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLGRSGA 9 V+GRSGA Sbjct: 369 VMGRSGA 375>XP_005244806 Length = 2049 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLGRSGA 9 V+GRSGA Sbjct: 369 VMGRSGA 375>XP_006710697 Length = 2053 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLGRSGA 9 V+GRSGA Sbjct: 369 VMGRSGA 375>XP_006710696 Length = 2057 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLGRSGA 9 V+GRSGA Sbjct: 369 VMGRSGA 375>NP_001157745 Length = 3065 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADVLGRSG 8 +D+LG+SG Sbjct: 2222 SDLLGKSG 2229>NP_001074010 Length = 2856 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADVLGRSG 8 +D+LG+SG Sbjct: 2013 SDLLGKSG 2020>NP_001026859 Length = 795 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLGRSGA 9 DV+G SGA Sbjct: 379 DVVGSSGA 386>NP_001252519 Length = 920 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLGRSGA 9 D+LGRS A Sbjct: 458 DILGRSPA 465>NP_958831 Length = 1013 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLGRSGA 9 D+LGRS A Sbjct: 551 DILGRSPA 558>NP_001252518 Length = 1032 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLGRSGA 9 D+LGRS A Sbjct: 570 DILGRSPA 577>XP_005254311 Length = 1627 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADVLGRSG 8 +D+LG+SG Sbjct: 783 SDLLGKSG 790>XP_006720508 Length = 2658 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADVLGRSG 8 +D+LG+SG Sbjct: 1814 SDLLGKSG 1821>XP_006720507 Length = 2763 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADVLGRSG 8 +D+LG+SG Sbjct: 1919 SDLLGKSG 1926>XP_005254310 Length = 2906 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADVLGRSG 8 +D+LG+SG Sbjct: 2062 SDLLGKSG 2069>XP_005254309 Length = 2956 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADVLGRSG 8 +D+LG+SG Sbjct: 2112 SDLLGKSG 2119>XP_005254306 Length = 3066 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADVLGRSG 8 +D+LG+SG Sbjct: 2222 SDLLGKSG 2229>XP_005254305 Length = 3114 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADVLGRSG 8 +D+LG+SG Sbjct: 2271 SDLLGKSG 2278>XP_005254304 Length = 3115 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADVLGRSG 8 +D+LG+SG Sbjct: 2271 SDLLGKSG 2278>XP_005254303 Length = 3115 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADVLGRSG 8 +D+LG+SG Sbjct: 2271 SDLLGKSG 2278>XP_006720506 Length = 3115 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADVLGRSG 8 +D+LG+SG Sbjct: 2271 SDLLGKSG 2278>XP_005254302 Length = 3115 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADVLGRSG 8 +D+LG+SG Sbjct: 2271 SDLLGKSG 2278>XP_005254301 Length = 3115 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADVLGRSG 8 +D+LG+SG Sbjct: 2271 SDLLGKSG 2278>XP_006720505 Length = 3115 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADVLGRSG 8 +D+LG+SG Sbjct: 2271 SDLLGKSG 2278>XP_005254300 Length = 3115 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADVLGRSG 8 +D+LG+SG Sbjct: 2271 SDLLGKSG 2278>NP_001158145 Length = 255 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VLGRSGA 9 VLGR GA Sbjct: 181 VLGRGGA 187>NP_000287 Length = 4302 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VLGRSG 8 VLGRSG Sbjct: 2450 VLGRSG 2455>NP_001009944 Length = 4303 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VLGRSG 8 VLGRSG Sbjct: 2450 VLGRSG 2455>NP_079172 Length = 904 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLGRSGA 9 +LGRSG+ Sbjct: 609 ILGRSGS 615>NP_001258791 Length = 531 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ADVLGRSG 8 A +LGRSG Sbjct: 523 AFILGRSG 530>NP_001159756 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ADVLGR 6 ADVLGR Sbjct: 252 ADVLGR 257>NP_006420 Length = 543 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ADVLGR 6 ADVLGR Sbjct: 339 ADVLGR 344>NP_001009570 Length = 339 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ADVLGR 6 ADVLGR Sbjct: 135 ADVLGR 140>NP_001159757 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ADVLGR 6 ADVLGR Sbjct: 295 ADVLGR 300>NP_001257711 Length = 214 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRSGA 9 LGRSGA Sbjct: 14 LGRSGA 19>NP_003192 Length = 246 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRSGA 9 LGRSGA Sbjct: 14 LGRSGA 19>NP_653267 Length = 4753 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DVLGRS 7 DVLGRS Sbjct: 1641 DVLGRS 1646>NP_775787 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ADVLGRSG 8 A +LGRSG Sbjct: 512 AFILGRSG 519>NP_001136113 Length = 1045 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRSGA 9 LGRSGA Sbjct: 810 LGRSGA 815>XP_006720958 Length = 2675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VLGRSG 8 VLGRSG Sbjct: 2487 VLGRSG 2492>XP_006720957 Length = 2688 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VLGRSG 8 VLGRSG Sbjct: 2487 VLGRSG 2492>XP_005255427 Length = 3288 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VLGRSG 8 VLGRSG Sbjct: 1435 VLGRSG 1440>XP_006720956 Length = 3895 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VLGRSG 8 VLGRSG Sbjct: 2042 VLGRSG 2047>XP_006720955 Length = 4279 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VLGRSG 8 VLGRSG Sbjct: 2426 VLGRSG 2431>XP_006720954 Length = 4334 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VLGRSG 8 VLGRSG Sbjct: 2487 VLGRSG 2492>XP_006720953 Length = 4339 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VLGRSG 8 VLGRSG Sbjct: 2487 VLGRSG 2492>XP_006720952 Length = 4340 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VLGRSG 8 VLGRSG Sbjct: 2487 VLGRSG 2492>XP_006719805 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRSGA 9 LGRSGA Sbjct: 774 LGRSGA 779>XP_005266236 Length = 986 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRSGA 9 LGRSGA Sbjct: 751 LGRSGA 756>XP_005266235 Length = 1015 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRSGA 9 LGRSGA Sbjct: 780 LGRSGA 785>XP_005266234 Length = 1043 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRSGA 9 LGRSGA Sbjct: 808 LGRSGA 813>XP_005266233 Length = 1044 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRSGA 9 LGRSGA Sbjct: 809 LGRSGA 814>XP_006719804 Length = 1051 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRSGA 9 LGRSGA Sbjct: 816 LGRSGA 821>XP_005266232 Length = 1062 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRSGA 9 LGRSGA Sbjct: 827 LGRSGA 832>XP_005266231 Length = 1062 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRSGA 9 LGRSGA Sbjct: 827 LGRSGA 832>XP_005266230 Length = 1083 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRSGA 9 LGRSGA Sbjct: 848 LGRSGA 853>XP_005266229 Length = 1084 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRSGA 9 LGRSGA Sbjct: 849 LGRSGA 854>XP_005266228 Length = 1085 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRSGA 9 LGRSGA Sbjct: 850 LGRSGA 855>XP_005253228 Length = 475 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRSGA 9 LGRSGA Sbjct: 467 LGRSGA 472>NP_109591 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADVLGRSGA 9 AD+ G SGA Sbjct: 302 ADLSGMSGA 310>NP_001273685 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ADVLGRS 7 ADV+G+S Sbjct: 542 ADVIGKS 548>NP_001805 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLGRSGA 9 DVLGR+ A Sbjct: 128 DVLGRNWA 135>NP_037499 Length = 808 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ADVLGRS 7 ADV+G+S Sbjct: 541 ADVIGKS 547>XP_006715071 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADVLGRSGA 9 AD+ G SGA Sbjct: 302 ADLSGMSGA 310>XP_005248216 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ADVLGRS 7 ADV+G+S Sbjct: 174 ADVIGKS 180>XP_006714024 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ADVLGRS 7 ADV+G+S Sbjct: 518 ADVIGKS 524Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.134 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 584,423 Number of extensions: 1356 Number of successful extensions: 76 Number of sequences better than 10000.0: 76 Number of HSP's gapped: 76 Number of HSP's successfully gapped: 76 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |