Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005912 20 299 XP_005248577 20 299 XP_005248576 20 299 NP_005206 17 2528 XP_005258261 17 2528 NP_004611 17 3301 NP_665802 17 3301 NP_065754 17 3301 NP_001007528 17 4312 NP_057675 16 5631 NP_861441 16 5631 NP_510968 16 5631 XP_006714823 16 5631 XP_006714822 16 5631 XP_005268443 16 5631 XP_005268434 16 5631 XP_006714819 16 5631 NP_789789 16 7355 NP_001186217 16 7355 NP_001186216 16 7355 NP_001186215 16 7355 NP_001186214 16 7355 NP_001008489 16 7355 NP_000706 16 7355 NP_940999 16 7355 XP_006724622 16 7355 XP_005272727 16 7355 XP_005273308 16 7355 XP_005273309 16 7355 NP_004913 16 7355 NP_001243092 15 9605 NP_001243095 15 9605 NP_001157 15 9605 NP_006197 15 9605 NP_001069 15 9605 NP_001186763 15 9605 NP_542413 15 9605 NP_001618 15 9605 NP_002301 15 9605 NP_001121143 15 9605 NP_001230212 15 9605 NP_001230210 15 9605 NP_001230209 15 9605 NP_001156 15 9605 NP_892007 15 9605 NP_055454 15 9605 NP_056273 15 9605 NP_056098 15 9605 NP_955384 15 9605 XP_005274042 15 9605 XP_006718609 15 9605 XP_006714104 15 9605 XP_005265800 15 9605 XP_006714103 15 9605 XP_006714102 15 9605 XP_005273301 15 9605 NP_003263 15 9605>NP_005912 Length = 1512 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 DTILVKCA 9 DTILVKCA Sbjct: 685 DTILVKCA 692>XP_005248577 Length = 1349 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 DTILVKCA 9 DTILVKCA Sbjct: 522 DTILVKCA 529>XP_005248576 Length = 1375 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 DTILVKCA 9 DTILVKCA Sbjct: 548 DTILVKCA 555>NP_005206 Length = 1447 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DTILVKC 8 DT+L+KC Sbjct: 155 DTVLLKC 161>XP_005258261 Length = 1447 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DTILVKC 8 DT+L+KC Sbjct: 155 DTVLLKC 161>NP_004611 Length = 522 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DTILVKC 8 DT+LV+C Sbjct: 491 DTLLVRC 497>NP_665802 Length = 522 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DTILVKC 8 DT+LV+C Sbjct: 491 DTLLVRC 497>NP_065754 Length = 493 Score = 16.9 bits (32), Expect = 3301 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 DTILVKC 8 DT+++KC Sbjct: 284 DTLIIKC 290>NP_001007528 Length = 695 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DTILVKC 8 DTIL KC Sbjct: 269 DTILKKC 275>NP_057675 Length = 453 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DTILVKC 8 D IL+KC Sbjct: 417 DPILIKC 423>NP_861441 Length = 483 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ILVKCA 9 ILVKCA Sbjct: 104 ILVKCA 109>NP_510968 Length = 476 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ILVKCA 9 ILVKCA Sbjct: 97 ILVKCA 102>XP_006714823 Length = 386 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ILVKCA 9 ILVKCA Sbjct: 97 ILVKCA 102>XP_006714822 Length = 398 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ILVKCA 9 ILVKCA Sbjct: 19 ILVKCA 24>XP_005268443 Length = 476 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ILVKCA 9 ILVKCA Sbjct: 97 ILVKCA 102>XP_005268434 Length = 393 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ILVKCA 9 ILVKCA Sbjct: 104 ILVKCA 109>XP_006714819 Length = 450 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ILVKCA 9 ILVKCA Sbjct: 104 ILVKCA 109>NP_789789 Length = 433 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DTILVKC 8 D+ILV+C Sbjct: 383 DSILVQC 389>NP_001186217 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ADTILVKCA 9 +DT +V+CA Sbjct: 18 SDTWIVQCA 26>NP_001186216 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ADTILVKCA 9 +DT +V+CA Sbjct: 18 SDTWIVQCA 26>NP_001186215 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ADTILVKCA 9 +DT +V+CA Sbjct: 18 SDTWIVQCA 26>NP_001186214 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ADTILVKCA 9 +DT +V+CA Sbjct: 18 SDTWIVQCA 26>NP_001008489 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ADTILVKCA 9 +DT +V+CA Sbjct: 18 SDTWIVQCA 26>NP_000706 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DTILVKC 8 DTI+ KC Sbjct: 261 DTIVFKC 267>NP_940999 Length = 1094 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 DTILVKCA 9 DT++ +CA Sbjct: 869 DTLITQCA 876>XP_006724622 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DTILVKC 8 D+ILV+C Sbjct: 299 DSILVQC 305>XP_005272727 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DTILVKC 8 D+ILV+C Sbjct: 325 DSILVQC 331>XP_005273308 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DTILVKC 8 DTI+ KC Sbjct: 261 DTIVFKC 267>XP_005273309 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DTILVKC 8 DTI+ KC Sbjct: 261 DTIVFKC 267>NP_004913 Length = 1094 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 DTILVKCA 9 DT++ +CA Sbjct: 869 DTLITQCA 876>NP_001243092 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DTILVK 7 DTILVK Sbjct: 511 DTILVK 516>NP_001243095 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DTILVK 7 DTILVK Sbjct: 462 DTILVK 467>NP_001157 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DTILVK 7 DTILVK Sbjct: 511 DTILVK 516>NP_006197 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DTILVKCA 9 +TI+V CA Sbjct: 229 ETIVVTCA 236>NP_001069 Length = 739 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 6/7 (85%) Query: 2 DTILVKC 8 DT+++ C Sbjct: 617 DTVIISC 623>NP_001186763 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 6/7 (85%) Query: 2 DTILVKC 8 DT+++ C Sbjct: 555 DTVIISC 561>NP_542413 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 6/7 (85%) Query: 2 DTILVKC 8 DT+++ C Sbjct: 525 DTVIISC 531>NP_001618 Length = 583 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 DTILVKC 8 DTI++ C Sbjct: 37 DTIIIPC 43>NP_002301 Length = 1097 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ADTILVK 7 AD+ILVK Sbjct: 737 ADSILVK 743>NP_001121143 Length = 1097 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ADTILVK 7 AD+ILVK Sbjct: 737 ADSILVK 743>NP_001230212 Length = 133 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 DTILVKC 8 DTI++ C Sbjct: 37 DTIIIPC 43>NP_001230210 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 DTILVKC 8 DTI++ C Sbjct: 37 DTIIIPC 43>NP_001230209 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 DTILVKC 8 DTI++ C Sbjct: 37 DTIIIPC 43>NP_001156 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DTILVK 7 DTILVK Sbjct: 497 DTILVK 502>NP_892007 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DTILVK 7 DTILVK Sbjct: 497 DTILVK 502>NP_055454 Length = 1564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ADTILVKCA 9 A T+L KC+ Sbjct: 1107 AKTLLFKCS 1115>NP_056273 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 TILVKC 8 TI++KC Sbjct: 68 TIIIKC 73>NP_056098 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DTILVKCA 9 DT+L CA Sbjct: 385 DTLLYTCA 392>NP_955384 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADTILVKCA 9 A TILV C+ Sbjct: 193 APTILVYCS 201>XP_005274042 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADTILVKCA 9 A TILV C+ Sbjct: 193 APTILVYCS 201>XP_006718609 Length = 308 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADTILVKCA 9 A TILV C+ Sbjct: 223 APTILVYCS 231>XP_006714104 Length = 832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DTILVKCA 9 +TI+V CA Sbjct: 254 ETIVVTCA 261>XP_005265800 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DTILVKCA 9 +TI+V CA Sbjct: 229 ETIVVTCA 236>XP_006714103 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DTILVKCA 9 +TI+V CA Sbjct: 251 ETIVVTCA 258>XP_006714102 Length = 1114 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DTILVKCA 9 +TI+V CA Sbjct: 254 ETIVVTCA 261>XP_005273301 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DTILVKCA 9 DT+ V CA Sbjct: 199 DTLFVLCA 206>NP_003263 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DTILVKCA 9 DT+ V CA Sbjct: 199 DTLFVLCA 206Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.134 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 509,747 Number of extensions: 897 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |