Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005912 18 1135 XP_005248577 18 1135 XP_005248576 18 1135 NP_002118 17 4312 NP_001014809 17 4312 NP_001171658 17 4312 NP_057021 17 4312 XP_006725972 17 4312 XP_006725763 17 4312 XP_006725104 17 4312 XP_006715143 17 4312 XP_005247998 17 4312 XP_005247997 17 4312 NP_065878 16 5631 XP_005263212 16 5631 XP_005263211 16 5631 XP_006710345 16 5631 XP_006710344 16 5631 XP_006710343 16 5631 XP_006710342 16 5631 NP_006305 16 5631 NP_001278383 16 7355 NP_055676 16 7355 NP_001273456 16 7355 NP_001245344 16 7355 NP_065860 16 7355 NP_001245347 16 7355 NP_001245346 16 7355 NP_001245345 16 7355 NP_065931 16 7355 XP_006723257 16 7355 XP_006723256 16 7355 XP_006721418 16 7355 XP_005271685 16 7355 XP_006718956 16 7355 NP_002248 15 9605 NP_954705 15 9605 NP_056173 15 9605 NP_001193849 15 9605 XP_006724049 15 9605 XP_006724048 15 9605 XP_005258957 15 9605>NP_005912 Length = 1512 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ADTATDVSK 9 A TATDVSK Sbjct: 995 AGTATDVSK 1003>XP_005248577 Length = 1349 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ADTATDVSK 9 A TATDVSK Sbjct: 832 AGTATDVSK 840>XP_005248576 Length = 1375 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ADTATDVSK 9 A TATDVSK Sbjct: 858 AGTATDVSK 866>NP_002118 Length = 338 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADTATDVSK 9 ADTA +SK Sbjct: 160 ADTAAQISK 168>NP_001014809 Length = 686 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DTATDVSK 9 DTA+DVS+ Sbjct: 83 DTASDVSE 90>NP_001171658 Length = 511 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DTATDVSK 9 DT TDV K Sbjct: 118 DTVTDVDK 125>NP_057021 Length = 578 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DTATDVSK 9 DT TDV K Sbjct: 118 DTVTDVDK 125>XP_006725972 Length = 346 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADTATDVSK 9 ADTA +SK Sbjct: 160 ADTAAQISK 168>XP_006725763 Length = 346 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADTATDVSK 9 ADTA +SK Sbjct: 160 ADTAAQISK 168>XP_006725104 Length = 346 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADTATDVSK 9 ADTA +SK Sbjct: 160 ADTAAQISK 168>XP_006715143 Length = 346 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADTATDVSK 9 ADTA +SK Sbjct: 160 ADTAAQISK 168>XP_005247998 Length = 689 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DTATDVSK 9 DTA+DVS+ Sbjct: 83 DTASDVSE 90>XP_005247997 Length = 713 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DTATDVSK 9 DTA+DVS+ Sbjct: 83 DTASDVSE 90>NP_065878 Length = 532 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DTATDVS 8 DT TDVS Sbjct: 250 DTVTDVS 256>XP_005263212 Length = 453 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DTATDVS 8 DT TDVS Sbjct: 250 DTVTDVS 256>XP_005263211 Length = 532 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DTATDVS 8 DT TDVS Sbjct: 250 DTVTDVS 256>XP_006710345 Length = 455 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ADTATDVS 8 ADT TD+S Sbjct: 219 ADTLTDLS 226>XP_006710344 Length = 720 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ADTATDVS 8 ADT TD+S Sbjct: 484 ADTLTDLS 491>XP_006710343 Length = 754 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ADTATDVS 8 ADT TD+S Sbjct: 518 ADTLTDLS 525>XP_006710342 Length = 761 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ADTATDVS 8 ADT TD+S Sbjct: 525 ADTLTDLS 532>NP_006305 Length = 713 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ADTATDVS 8 ADT TD+S Sbjct: 477 ADTLTDLS 484>NP_001278383 Length = 795 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TATDVSK 9 T TDVSK Sbjct: 543 TGTDVSK 549>NP_055676 Length = 946 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TATDVSK 9 T TDVSK Sbjct: 694 TGTDVSK 700>NP_001273456 Length = 975 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TATDVSK 9 T TDVSK Sbjct: 694 TGTDVSK 700>NP_001245344 Length = 1168 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TATDVSK 9 T TDVSK Sbjct: 740 TGTDVSK 746>NP_065860 Length = 1191 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TATDVSK 9 T TDVSK Sbjct: 763 TGTDVSK 769>NP_001245347 Length = 1155 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TATDVSK 9 T TDVSK Sbjct: 727 TGTDVSK 733>NP_001245346 Length = 1155 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TATDVSK 9 T TDVSK Sbjct: 727 TGTDVSK 733>NP_001245345 Length = 1165 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TATDVSK 9 T TDVSK Sbjct: 737 TGTDVSK 743>NP_065931 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ADTATDVS 8 ADT+TD S Sbjct: 83 ADTSTDKS 90>XP_006723257 Length = 332 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ADTATDVS 8 ADT+TD S Sbjct: 83 ADTSTDKS 90>XP_006723256 Length = 459 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ADTATDVS 8 ADT+TD S Sbjct: 83 ADTSTDKS 90>XP_006721418 Length = 972 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TATDVSK 9 T TDVSK Sbjct: 691 TGTDVSK 697>XP_005271685 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TATDVSK 9 T TDVSK Sbjct: 306 TGTDVSK 312>XP_006718956 Length = 1191 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TATDVSK 9 T TDVSK Sbjct: 763 TGTDVSK 769>NP_002248 Length = 262 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ADTATDVSK 9 ADT TD K Sbjct: 130 ADTITDAVK 138>NP_954705 Length = 268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TATDVSK 9 TA+D+SK Sbjct: 45 TASDISK 51>NP_056173 Length = 939 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TATDVS 8 TATDVS Sbjct: 868 TATDVS 873>NP_001193849 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TATDVS 8 TATDVS Sbjct: 237 TATDVS 242>XP_006724049 Length = 978 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TATDVS 8 TATDVS Sbjct: 907 TATDVS 912>XP_006724048 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TATDVS 8 TATDVS Sbjct: 797 TATDVS 802>XP_005258957 Length = 160 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ADTATDVSK 9 ADT TD K Sbjct: 28 ADTITDAVK 36Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.292 0.104 0.248 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 369,103 Number of extensions: 595 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |