Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001186084 17 2528 NP_008998 17 2528 NP_001138135 17 3301 NP_004054 17 3301 XP_006725534 17 3301 NP_443155 17 3301 XP_005250933 17 4312 XP_005250932 17 4312 NP_775956 17 4312 NP_004958 16 5631 NP_004554 16 7355 NP_001018083 16 7355 NP_001243000 16 7355 NP_001157017 16 7355 NP_009178 16 7355 NP_942583 16 7355 NP_542117 16 7355 NP_001157016 16 7355 NP_001157018 16 7355 NP_001157019 16 7355 NP_659436 16 7355 XP_006725374 16 7355 XP_006725373 16 7355 XP_006725372 16 7355 XP_006725371 16 7355 XP_006725370 16 7355 XP_006725369 16 7355 XP_006725368 16 7355 XP_006725367 16 7355 XP_006725366 16 7355 XP_006725365 16 7355 XP_006725364 16 7355 XP_005257603 16 7355 XP_006722058 16 7355 XP_005257602 16 7355 XP_006721718 16 7355 XP_006721717 16 7355 XP_006721716 16 7355 XP_005257045 16 7355 XP_005257043 16 7355 XP_005257042 16 7355 XP_006721715 16 7355 XP_005257040 16 7355 XP_005257039 16 7355 XP_005257038 16 7355 XP_005257037 16 7355 XP_006720221 16 7355 XP_005267783 16 7355 NP_071376 16 7355 NP_004898 16 7355 NP_001171695 15 9605 NP_001007023 15 9605 NP_001171694 15 9605 NP_001280 15 9605 NP_065780 15 9605 NP_787063 15 9605 NP_037501 15 9605 XP_005271681 15 9605 XP_005271114 15 9605 XP_005271113 15 9605 XP_005271112 15 9605 XP_005271111 15 9605>NP_001186084 Length = 581 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ADREAENTA 9 +DRE +NTA Sbjct: 111 SDRETKNTA 119>NP_008998 Length = 611 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ADREAENTA 9 +DRE +NTA Sbjct: 111 SDRETKNTA 119>NP_001138135 Length = 832 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DREAENTA 9 DR+ ENTA Sbjct: 366 DRDEENTA 373>NP_004054 Length = 832 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DREAENTA 9 DR+ ENTA Sbjct: 366 DRDEENTA 373>XP_006725534 Length = 1174 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+E ENT Sbjct: 402 ADKELENT 409>NP_443155 Length = 1325 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+E ENT Sbjct: 553 ADKELENT 560>XP_005250933 Length = 247 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 ADREA+ T Sbjct: 144 ADREADGT 151>XP_005250932 Length = 247 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 ADREA+ T Sbjct: 144 ADREADGT 151>NP_775956 Length = 247 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 ADREA+ T Sbjct: 144 ADREADGT 151>NP_004958 Length = 317 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DREAENT 8 D EAENT Sbjct: 99 DSEAENT 105>NP_004554 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EAENTA 9 EAENTA Sbjct: 67 EAENTA 72>NP_001018083 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EAENTA 9 EAENTA Sbjct: 67 EAENTA 72>NP_001243000 Length = 5207 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 REAENTA 9 REAEN A Sbjct: 2465 REAENVA 2471>NP_001157017 Length = 1235 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 443 ADKSSENT 450>NP_009178 Length = 1314 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 522 ADKSSENT 529>NP_942583 Length = 1259 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 444 ADKSSENT 451>NP_542117 Length = 1224 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 444 ADKSSENT 451>NP_001157016 Length = 1236 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 444 ADKSSENT 451>NP_001157018 Length = 1179 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 444 ADKSSENT 451>NP_001157019 Length = 1108 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 361 ADKSSENT 368>NP_659436 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DREAENTA 9 DRE+EN + Sbjct: 617 DRESENAS 624>XP_006725374 Length = 1191 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 444 ADKSSENT 451>XP_006725373 Length = 1223 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 443 ADKSSENT 450>XP_006725372 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 623 ADKSSENT 630>XP_006725371 Length = 1302 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 522 ADKSSENT 529>XP_006725370 Length = 1369 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 623 ADKSSENT 630>XP_006725369 Length = 1370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 623 ADKSSENT 630>XP_006725368 Length = 1387 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 595 ADKSSENT 602>XP_006725367 Length = 1394 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 623 ADKSSENT 630>XP_006725366 Length = 1403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 623 ADKSSENT 630>XP_006725365 Length = 1414 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 622 ADKSSENT 629>XP_006725364 Length = 1415 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 623 ADKSSENT 630>XP_005257603 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 REAENTA 9 REAEN A Sbjct: 2514 REAENVA 2520>XP_006722058 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 REAENTA 9 REAEN A Sbjct: 2514 REAENVA 2520>XP_005257602 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 REAENTA 9 REAEN A Sbjct: 2514 REAENVA 2520>XP_006721718 Length = 1191 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 444 ADKSSENT 451>XP_006721717 Length = 1223 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 443 ADKSSENT 450>XP_006721716 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 623 ADKSSENT 630>XP_005257045 Length = 1302 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 522 ADKSSENT 529>XP_005257043 Length = 1369 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 623 ADKSSENT 630>XP_005257042 Length = 1370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 623 ADKSSENT 630>XP_006721715 Length = 1387 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 595 ADKSSENT 602>XP_005257040 Length = 1394 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 623 ADKSSENT 630>XP_005257039 Length = 1403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 623 ADKSSENT 630>XP_005257038 Length = 1414 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 622 ADKSSENT 629>XP_005257037 Length = 1415 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ADREAENT 8 AD+ +ENT Sbjct: 623 ADKSSENT 630>XP_006720221 Length = 497 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EAENTA 9 EAENTA Sbjct: 67 EAENTA 72>XP_005267783 Length = 608 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EAENTA 9 EAENTA Sbjct: 67 EAENTA 72>NP_071376 Length = 1299 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DREAENTA 9 DR ENTA Sbjct: 540 DRVTENTA 547>NP_004898 Length = 223 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 REAENTA 9 REAE+TA Sbjct: 75 REAESTA 81>NP_001171695 Length = 591 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DREAENT 8 D E+ENT Sbjct: 139 DNESENT 145>NP_001007023 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DREAENT 8 D E+ENT Sbjct: 139 DNESENT 145>NP_001171694 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DREAENT 8 D E+ENT Sbjct: 139 DNESENT 145>NP_001280 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DREAENT 8 D+E ENT Sbjct: 232 DKEIENT 238>NP_065780 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DREAENT 8 D E+ENT Sbjct: 139 DNESENT 145>NP_787063 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DREAEN 7 DRE+EN Sbjct: 169 DRESEN 174>NP_037501 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DREAEN 7 DRE+EN Sbjct: 169 DRESEN 174>XP_005271681 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DREAENTA 9 DRE +NT+ Sbjct: 2 DREKKNTS 9>XP_005271114 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DREAENT 8 D E+ENT Sbjct: 139 DNESENT 145>XP_005271113 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DREAENT 8 D E+ENT Sbjct: 139 DNESENT 145>XP_005271112 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DREAENT 8 D E+ENT Sbjct: 139 DNESENT 145>XP_005271111 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DREAENT 8 D E+ENT Sbjct: 139 DNESENT 145Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.289 0.103 0.247 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 530,463 Number of extensions: 907 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |