Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 299 XP_005262424 20 299 NP_115543 16 5631 NP_001243496 16 5631 NP_001261 16 5631 NP_001186074 16 5631 NP_001186072 16 5631 NP_001073278 16 5631 XP_006721041 16 5631 XP_006721040 16 5631 XP_005255739 16 5631 XP_005271924 16 5631 XP_005271923 16 5631 NP_597722 16 7355 NP_001273967 16 7355 NP_001273965 16 7355 NP_835260 16 7355 XP_006717041 16 7355 XP_006714523 16 7355 XP_005248329 16 7355 XP_005248328 16 7355 XP_006714522 16 7355 XP_006714521 16 7355 XP_006714520 16 7355 XP_005248327 16 7355 XP_005248326 16 7355 XP_006714519 16 7355 XP_005247497 16 7355 NP_001078889 16 7355 NP_036456 15 9605 NP_078966 15 9605 NP_998821 15 9605 NP_001137325 15 9605 XP_006724409 15 9605 XP_005261851 15 9605 XP_005261850 15 9605 XP_006718815 15 9605 XP_006716681 15 9605 NP_055601 15 9605 NP_001034201 15 9605 NP_004308 15 9605 NP_001138678 15 9605>NP_722576 Length = 3080 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ADETASKYE 9 ADETASKY+ Sbjct: 2388 ADETASKYK 2396>XP_005262424 Length = 2875 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ADETASKYE 9 ADETASKY+ Sbjct: 2183 ADETASKYK 2191>NP_115543 Length = 813 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADETASKYE 9 A+E AS YE Sbjct: 581 AEELASSYE 589>NP_001243496 Length = 231 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ADETASKY 8 ADE SKY Sbjct: 198 ADEALSKY 205>NP_001261 Length = 1710 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DETASKYE 9 DET S YE Sbjct: 176 DETESDYE 183>NP_001186074 Length = 716 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ADETASKYE 9 A++TA++YE Sbjct: 518 ANDTANEYE 526>NP_001186072 Length = 971 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ADETASKYE 9 A++TA++YE Sbjct: 773 ANDTANEYE 781>NP_001073278 Length = 938 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ADETASKYE 9 A++TA++YE Sbjct: 740 ANDTANEYE 748>XP_006721041 Length = 680 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADETASKYE 9 A+E AS YE Sbjct: 448 AEELASSYE 456>XP_006721040 Length = 661 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADETASKYE 9 A+E AS YE Sbjct: 429 AEELASSYE 437>XP_005255739 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADETASKYE 9 A+E AS YE Sbjct: 591 AEELASSYE 599>XP_005271924 Length = 1710 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DETASKYE 9 DET S YE Sbjct: 176 DETESDYE 183>XP_005271923 Length = 1798 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DETASKYE 9 DET S YE Sbjct: 176 DETESDYE 183>NP_597722 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DETASKYE 9 DET +YE Sbjct: 132 DETVEEYE 139>NP_001273967 Length = 448 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DETASKYE 9 DET +YE Sbjct: 132 DETVEEYE 139>NP_001273965 Length = 744 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DETASKYE 9 DET +YE Sbjct: 132 DETVEEYE 139>NP_835260 Length = 2839 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DETASKYE 9 DET ++YE Sbjct: 1741 DETLNQYE 1748>XP_006717041 Length = 738 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DETASKYE 9 DET +YE Sbjct: 132 DETVEEYE 139>XP_006714523 Length = 2542 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DETASKYE 9 DET ++YE Sbjct: 1410 DETLNQYE 1417>XP_005248329 Length = 2699 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DETASKYE 9 DET ++YE Sbjct: 1567 DETLNQYE 1574>XP_005248328 Length = 2699 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DETASKYE 9 DET ++YE Sbjct: 1567 DETLNQYE 1574>XP_006714522 Length = 2719 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DETASKYE 9 DET ++YE Sbjct: 1587 DETLNQYE 1594>XP_006714521 Length = 2781 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DETASKYE 9 DET ++YE Sbjct: 1649 DETLNQYE 1656>XP_006714520 Length = 2802 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DETASKYE 9 DET ++YE Sbjct: 1670 DETLNQYE 1677>XP_005248327 Length = 2839 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DETASKYE 9 DET ++YE Sbjct: 1741 DETLNQYE 1748>XP_005248326 Length = 2873 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DETASKYE 9 DET ++YE Sbjct: 1741 DETLNQYE 1748>XP_006714519 Length = 2873 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DETASKYE 9 DET ++YE Sbjct: 1741 DETLNQYE 1748>XP_005247497 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ETASKYE 9 ET++KYE Sbjct: 71 ETSNKYE 77>NP_001078889 Length = 271 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ETASKYE 9 ET++KYE Sbjct: 83 ETSNKYE 89>NP_036456 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DETASKYE 9 D+T S+YE Sbjct: 325 DDTNSEYE 332>NP_078966 Length = 14507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ADETASK 7 AD TASK Sbjct: 197 ADSTASK 203>NP_998821 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ADETASKYE 9 AD+ +KYE Sbjct: 178 ADDLRAKYE 186>NP_001137325 Length = 203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 DETASKY 8 DET KY Sbjct: 8 DETGGKY 14>XP_006724409 Length = 1806 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DETASKYE 9 +ETASK E Sbjct: 1704 EETASKAE 1711>XP_005261851 Length = 1806 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DETASKYE 9 +ETASK E Sbjct: 1704 EETASKAE 1711>XP_005261850 Length = 1806 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DETASKYE 9 +ETASK E Sbjct: 1704 EETASKAE 1711>XP_006718815 Length = 1057 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ETASKYE 9 +TASKY+ Sbjct: 336 DTASKYK 342>XP_006716681 Length = 1867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 DETASKYE 9 DET YE Sbjct: 1528 DETVESYE 1535>NP_055601 Length = 2063 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ETASKYE 9 +TASKY+ Sbjct: 1342 DTASKYK 1348>NP_001034201 Length = 1857 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 DETASKYE 9 DET YE Sbjct: 1518 DETVESYE 1525>NP_004308 Length = 348 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADETASKYE 9 AD+ ASK E Sbjct: 215 ADQLASKLE 223>NP_001138678 Length = 1806 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DETASKYE 9 +ETASK E Sbjct: 1704 EETASKAE 1711Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.284 0.103 0.246 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 449,928 Number of extensions: 823 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |