Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 18 1482 NP_001123363 16 5631 NP_001019831 16 7355 NP_003938 16 7355 XP_006713880 16 7355 XP_006713879 16 7355 XP_006713878 16 7355 XP_006713877 16 7355 XP_006713874 16 7355 XP_006713873 16 7355 NP_001106849 15 9605 NP_060663 15 9605 NP_057257 15 9605 NP_203754 15 9605 XP_006718789 15 9605 XP_006718788 15 9605 XP_005274419 15 9605 XP_005265276 15 9605 XP_005265275 15 9605>NP_443179 Length = 2170 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ADARESAIS 9 ADARE AIS Sbjct: 597 ADARECAIS 605>NP_001123363 Length = 535 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DARESAIS 9 +ARESA+S Sbjct: 215 EARESALS 222>NP_001019831 Length = 2986 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ADARESAIS 9 ++AR+SA+S Sbjct: 719 SEARDSAVS 727>NP_003938 Length = 1663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ADARESAIS 9 ++AR+SA+S Sbjct: 719 SEARDSAVS 727>XP_006713880 Length = 1530 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ADARESAIS 9 ++AR+SA+S Sbjct: 721 SEARDSAVS 729>XP_006713879 Length = 1656 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ADARESAIS 9 ++AR+SA+S Sbjct: 721 SEARDSAVS 729>XP_006713878 Length = 1665 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ADARESAIS 9 ++AR+SA+S Sbjct: 721 SEARDSAVS 729>XP_006713877 Length = 2956 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ADARESAIS 9 ++AR+SA+S Sbjct: 721 SEARDSAVS 729>XP_006713874 Length = 2979 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ADARESAIS 9 ++AR+SA+S Sbjct: 721 SEARDSAVS 729>XP_006713873 Length = 2988 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ADARESAIS 9 ++AR+SA+S Sbjct: 721 SEARDSAVS 729>NP_001106849 Length = 1328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DARESAIS 9 DAR+SA++ Sbjct: 531 DARKSAVA 538>NP_060663 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DARESAIS 9 DAR+SA++ Sbjct: 531 DARKSAVA 538>NP_057257 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DARESAIS 9 D RE+AIS Sbjct: 190 DKREAAIS 197>NP_203754 Length = 1729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADARESAI 8 ++ARESA+ Sbjct: 1182 SEARESAV 1189>XP_006718789 Length = 1053 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADARESAI 8 ++ARESA+ Sbjct: 506 SEARESAV 513>XP_006718788 Length = 1729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADARESAI 8 ++ARESA+ Sbjct: 1182 SEARESAV 1189>XP_005274419 Length = 1808 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ADARESAI 8 ++ARESA+ Sbjct: 1261 SEARESAV 1268>XP_005265276 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DARESAIS 9 D RE+AIS Sbjct: 83 DKREAAIS 90>XP_005265275 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DARESAIS 9 D RE+AIS Sbjct: 190 DKREAAIS 197Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.106 0.237 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 290,807 Number of extensions: 212 Number of successful extensions: 19 Number of sequences better than 10000.0: 19 Number of HSP's gapped: 19 Number of HSP's successfully gapped: 19 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |