Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000312 20 509 NP_001156602 17 3301 NP_001030008 17 3301 NP_663629 17 3301 NP_001156593 17 3301 NP_001156594 17 3301 NP_659403 17 4312 NP_899662 17 4312 NP_002886 17 4312 XP_006723905 17 4312 XP_006716791 17 4312 XP_006716790 17 4312 XP_006716789 17 4312 XP_006716788 17 4312 XP_006716787 17 4312 XP_006716786 17 4312 XP_005251439 17 4312 NP_005602 16 5631 NP_060395 16 5631 XP_005256140 16 5631 XP_006716870 16 5631 XP_006716869 16 5631 XP_006716868 16 5631 XP_006716867 16 5631 NP_861420 15 9605 NP_005516 15 9605 NP_001193670 15 9605 NP_055370 15 9605 NP_055919 15 9605 NP_036530 15 9605 NP_001182662 15 9605 NP_001123292 15 9605 NP_071373 15 9605 XP_006722775 15 9605 XP_005259580 15 9605 XP_005258025 15 9605 XP_005273907 15 9605 XP_005273906 15 9605 XP_005252939 15 9605 XP_005266015 15 9605>NP_000312 Length = 928 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ACALEVVM 8 ACALEVVM Sbjct: 488 ACALEVVM 495>NP_001156602 Length = 261 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 CALEVVM 8 CALEVV+ Sbjct: 138 CALEVVL 144>NP_001030008 Length = 236 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 CALEVVM 8 CALEVV+ Sbjct: 161 CALEVVL 167>NP_663629 Length = 284 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 CALEVVM 8 CALEVV+ Sbjct: 161 CALEVVL 167>NP_001156593 Length = 251 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 CALEVVM 8 CALEVV+ Sbjct: 161 CALEVVL 167>NP_001156594 Length = 228 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 CALEVVM 8 CALEVV+ Sbjct: 138 CALEVVL 144>NP_659403 Length = 2179 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ACALEVVM 8 AC +EVVM Sbjct: 57 ACKVEVVM 64>NP_899662 Length = 1014 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ACALEVVM 8 AC LE+V+ Sbjct: 503 ACCLEIVL 510>NP_002886 Length = 1068 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ACALEVVM 8 AC LE+V+ Sbjct: 503 ACCLEIVL 510>XP_006723905 Length = 896 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ACALEVVM 8 AC LE+V+ Sbjct: 331 ACCLEIVL 338>XP_006716791 Length = 1337 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ACALEVVM 8 AC +EVVM Sbjct: 57 ACKVEVVM 64>XP_006716790 Length = 1401 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ACALEVVM 8 AC +EVVM Sbjct: 57 ACKVEVVM 64>XP_006716789 Length = 1482 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ACALEVVM 8 AC +EVVM Sbjct: 57 ACKVEVVM 64>XP_006716788 Length = 1842 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ACALEVVM 8 AC +EVVM Sbjct: 57 ACKVEVVM 64>XP_006716787 Length = 1864 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ACALEVVM 8 AC +EVVM Sbjct: 57 ACKVEVVM 64>XP_006716786 Length = 2179 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ACALEVVM 8 AC +EVVM Sbjct: 57 ACKVEVVM 64>XP_005251439 Length = 2179 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ACALEVVM 8 AC +EVVM Sbjct: 57 ACKVEVVM 64>NP_005602 Length = 1139 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ACALEVV 7 AC LEVV Sbjct: 534 ACCLEVV 540>NP_060395 Length = 1909 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 CALEVVM 8 CA+EV+M Sbjct: 1483 CAMEVLM 1489>XP_005256140 Length = 1065 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ACALEVV 7 AC LEVV Sbjct: 460 ACCLEVV 466>XP_006716870 Length = 1456 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 CALEVVM 8 CA+EV+M Sbjct: 1030 CAMEVLM 1036>XP_006716869 Length = 1722 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 CALEVVM 8 CA+EV+M Sbjct: 1296 CAMEVLM 1302>XP_006716868 Length = 1894 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 CALEVVM 8 CA+EV+M Sbjct: 1532 CAMEVLM 1538>XP_006716867 Length = 1958 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 CALEVVM 8 CA+EV+M Sbjct: 1532 CAMEVLM 1538>NP_861420 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CALEVV 7 CALE++ Sbjct: 241 CALEII 246>NP_005516 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CALEVV 7 CALE++ Sbjct: 241 CALEII 246>NP_001193670 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CALEVV 7 CALE++ Sbjct: 241 CALEII 246>NP_055370 Length = 1165 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ACALEVVMV 9 +C LE VMV Sbjct: 377 SCDLEEVMV 385>NP_055919 Length = 1938 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 CALEVVM 8 C+LEV++ Sbjct: 811 CSLEVIL 817>NP_036530 Length = 668 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 ACALEVVM 8 AC++E+V+ Sbjct: 582 ACSVEIVV 589>NP_001182662 Length = 640 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 ACALEVVM 8 AC++E+V+ Sbjct: 582 ACSVEIVV 589>NP_001123292 Length = 912 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CALEVVMV 9 CALE+ V Sbjct: 734 CALEIAKV 741>NP_071373 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 CALEVVMV 9 CALE+ + Sbjct: 119 CALEIAQI 126>XP_006722775 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 ACALEVVM 8 AC++E+V+ Sbjct: 571 ACSVEIVV 578>XP_005259580 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 ACALEVVM 8 AC++E+V+ Sbjct: 582 ACSVEIVV 589>XP_005258025 Length = 912 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CALEVVMV 9 CALE+ V Sbjct: 734 CALEIAKV 741>XP_005273907 Length = 1930 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 CALEVVM 8 C+LEV++ Sbjct: 811 CSLEVIL 817>XP_005273906 Length = 1932 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 CALEVVM 8 C+LEV++ Sbjct: 811 CSLEVIL 817>XP_005252939 Length = 1184 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ACALEVVMV 9 +C LE VMV Sbjct: 395 SCDLEEVMV 403>XP_005266015 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 CALEVVMV 9 CALE+ + Sbjct: 119 CALEIAQI 126Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.134 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 398,245 Number of extensions: 282 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |