Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 19 869 NP_001091680 19 869 NP_001091679 19 869 XP_006713048 19 869 XP_006713047 19 869 XP_006713046 19 869 XP_005264943 19 869 NP_002221 17 2528 NP_068831 17 2528 XP_006721941 17 2528 XP_006721940 17 2528 XP_006721939 17 2528 XP_006721938 17 2528 XP_006721937 17 2528 XP_006721936 17 2528 XP_006721935 17 2528 XP_006721934 17 2528 XP_005257370 17 2528 NP_059344 16 5631 NP_006331 16 5631 NP_059345 16 5631 XP_005257005 16 5631 XP_006721701 16 5631 XP_006721700 16 5631 XP_005257002 16 5631 XP_005257001 16 5631 XP_006721699 16 5631 XP_006721698 16 5631 XP_005257000 16 5631 NP_001138360 16 5631 NP_001229825 16 7355 NP_001229826 16 7355 NP_055477 16 7355 NP_001129501 16 7355 XP_006724448 16 7355 XP_006724447 16 7355 XP_005261922 16 7355 XP_005261921 16 7355 XP_005261920 16 7355 XP_005261919 16 7355 NP_001245221 15 9605 NP_036472 15 9605 NP_001129493 15 9605 NP_001245226 15 9605 NP_775114 15 9605 NP_001245223 15 9605 NP_001245225 15 9605 NP_001245224 15 9605 XP_005260470 15 9605>NP_001895 Length = 781 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AAVLFQMSE 9 AAVLF+MSE Sbjct: 656 AAVLFRMSE 664>NP_001091680 Length = 781 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AAVLFQMSE 9 AAVLF+MSE Sbjct: 656 AAVLFRMSE 664>NP_001091679 Length = 781 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AAVLFQMSE 9 AAVLF+MSE Sbjct: 656 AAVLFRMSE 664>XP_006713048 Length = 720 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AAVLFQMSE 9 AAVLF+MSE Sbjct: 656 AAVLFRMSE 664>XP_006713047 Length = 774 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AAVLFQMSE 9 AAVLF+MSE Sbjct: 649 AAVLFRMSE 657>XP_006713046 Length = 774 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AAVLFQMSE 9 AAVLF+MSE Sbjct: 649 AAVLFRMSE 657>XP_005264943 Length = 781 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AAVLFQMSE 9 AAVLF+MSE Sbjct: 656 AAVLFRMSE 664>NP_002221 Length = 745 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVLFQMSE 9 AAVLF++SE Sbjct: 646 AAVLFRISE 654>NP_068831 Length = 745 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVLFQMSE 9 AAVLF++SE Sbjct: 646 AAVLFRISE 654>XP_006721941 Length = 745 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVLFQMSE 9 AAVLF++SE Sbjct: 646 AAVLFRISE 654>XP_006721940 Length = 745 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVLFQMSE 9 AAVLF++SE Sbjct: 646 AAVLFRISE 654>XP_006721939 Length = 745 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVLFQMSE 9 AAVLF++SE Sbjct: 646 AAVLFRISE 654>XP_006721938 Length = 745 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVLFQMSE 9 AAVLF++SE Sbjct: 646 AAVLFRISE 654>XP_006721937 Length = 745 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVLFQMSE 9 AAVLF++SE Sbjct: 646 AAVLFRISE 654>XP_006721936 Length = 745 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVLFQMSE 9 AAVLF++SE Sbjct: 646 AAVLFRISE 654>XP_006721935 Length = 762 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVLFQMSE 9 AAVLF++SE Sbjct: 663 AAVLFRISE 671>XP_006721934 Length = 783 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVLFQMSE 9 AAVLF++SE Sbjct: 684 AAVLFRISE 692>XP_005257370 Length = 783 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVLFQMSE 9 AAVLF++SE Sbjct: 684 AAVLFRISE 692>NP_059344 Length = 521 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLFQMSE 9 VLFQM+E Sbjct: 75 VLFQMAE 81>NP_006331 Length = 520 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLFQMSE 9 VLFQM+E Sbjct: 75 VLFQMAE 81>NP_059345 Length = 552 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLFQMSE 9 VLFQM+E Sbjct: 75 VLFQMAE 81>XP_005257005 Length = 522 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLFQMSE 9 VLFQM+E Sbjct: 75 VLFQMAE 81>XP_006721701 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLFQMSE 9 VLFQM+E Sbjct: 69 VLFQMAE 75>XP_006721700 Length = 535 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLFQMSE 9 VLFQM+E Sbjct: 75 VLFQMAE 81>XP_005257002 Length = 553 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLFQMSE 9 VLFQM+E Sbjct: 108 VLFQMAE 114>XP_005257001 Length = 554 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLFQMSE 9 VLFQM+E Sbjct: 108 VLFQMAE 114>XP_006721699 Length = 554 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLFQMSE 9 VLFQM+E Sbjct: 108 VLFQMAE 114>XP_006721698 Length = 555 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLFQMSE 9 VLFQM+E Sbjct: 108 VLFQMAE 114>XP_005257000 Length = 567 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLFQMSE 9 VLFQM+E Sbjct: 108 VLFQMAE 114>NP_001138360 Length = 534 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLFQMSE 9 VLFQM+E Sbjct: 75 VLFQMAE 81>NP_001229825 Length = 1603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AAVLFQM 7 AAVLF+M Sbjct: 1395 AAVLFEM 1401>NP_001229826 Length = 1503 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AAVLFQM 7 AAVLF+M Sbjct: 1295 AAVLFEM 1301>NP_055477 Length = 1572 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AAVLFQM 7 AAVLF+M Sbjct: 1364 AAVLFEM 1370>NP_001129501 Length = 1594 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AAVLFQM 7 AAVLF+M Sbjct: 1386 AAVLFEM 1392>XP_006724448 Length = 1490 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AAVLFQM 7 AAVLF+M Sbjct: 1282 AAVLFEM 1288>XP_006724447 Length = 1516 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AAVLFQM 7 AAVLF+M Sbjct: 1308 AAVLFEM 1314>XP_005261922 Length = 1525 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AAVLFQM 7 AAVLF+M Sbjct: 1317 AAVLFEM 1323>XP_005261921 Length = 1581 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AAVLFQM 7 AAVLF+M Sbjct: 1373 AAVLFEM 1379>XP_005261920 Length = 1594 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AAVLFQM 7 AAVLF+M Sbjct: 1386 AAVLFEM 1392>XP_005261919 Length = 1603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AAVLFQM 7 AAVLF+M Sbjct: 1395 AAVLFEM 1401>NP_001245221 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVLFQMSE 9 AAVL+Q S+ Sbjct: 728 AAVLYQRSK 736>NP_036472 Length = 921 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVLFQMSE 9 AAVL+Q S+ Sbjct: 748 AAVLYQRSK 756>NP_001129493 Length = 901 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVLFQMSE 9 AAVL+Q S+ Sbjct: 728 AAVLYQRSK 736>NP_001245226 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVLFQMSE 9 AAVL+Q S+ Sbjct: 529 AAVLYQRSK 537>NP_775114 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVLFQMSE 9 AAVL+Q S+ Sbjct: 748 AAVLYQRSK 756>NP_001245223 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVLFQMSE 9 AAVL+Q S+ Sbjct: 529 AAVLYQRSK 537>NP_001245225 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVLFQMSE 9 AAVL+Q S+ Sbjct: 529 AAVLYQRSK 537>NP_001245224 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVLFQMSE 9 AAVL+Q S+ Sbjct: 529 AAVLYQRSK 537>XP_005260470 Length = 924 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVLFQMSE 9 AAVL+Q S+ Sbjct: 747 AAVLYQRSK 755Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.125 0.298 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 292,240 Number of extensions: 343 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |