Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 19 665 NP_000242 19 665 XP_005264389 19 665 NP_001107604 18 1935 XP_005246845 18 1935 XP_006712765 18 1935 XP_006712764 18 1935 XP_005246844 18 1935 XP_006712763 18 1935 XP_006712762 18 1935 XP_006712761 18 1935 NP_665803 17 2528 NP_570853 17 4312 NP_570854 17 4312 NP_000453 17 4312 XP_005268328 17 4312 XP_006720739 17 4312 XP_005268327 17 4312 XP_005268326 17 4312 XP_005268324 17 4312 XP_005268325 17 4312 XP_006720738 17 4312 XP_006720737 17 4312 XP_006720736 17 4312 XP_006714215 17 4312 XP_006714214 17 4312 XP_005262915 17 4312 NP_055806 17 4312 NP_057287 16 5631 NP_077747 16 5631 NP_001035723 16 5631 NP_065996 16 5631 XP_005270064 16 5631 XP_005270062 16 5631 XP_005270061 16 5631 XP_005250066 16 5631 XP_005250064 16 5631 XP_005250063 16 5631 XP_005250062 16 5631 XP_005250061 16 5631 XP_006716084 16 5631 XP_005250060 16 5631 XP_005250059 16 5631 NP_852478 16 7355 NP_055192 16 7355 NP_001123359 16 7355 NP_065757 16 7355 NP_001138917 16 7355 XP_005261074 16 7355 XP_006724099 16 7355 XP_006724098 16 7355 XP_005250326 16 7355 NP_001268232 15 9605 NP_006406 15 9605 NP_001153699 15 9605 NP_079413 15 9605 NP_001166251 15 9605 NP_001166250 15 9605 NP_443111 15 9605 NP_954658 15 9605 XP_006720764 15 9605 XP_006720763 15 9605 XP_006720762 15 9605 XP_005254751 15 9605 XP_006719279 15 9605 XP_005268670 15 9605 XP_006719278 15 9605 XP_005247190 15 9605 XP_006713571 15 9605 NP_001164275 15 9605 NP_001164279 15 9605>NP_001245210 Length = 868 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AAVKALNLF 9 AAV+ALNLF Sbjct: 239 AAVRALNLF 247>NP_000242 Length = 934 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AAVKALNLF 9 AAV+ALNLF Sbjct: 305 AAVRALNLF 313>XP_005264389 Length = 921 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AAVKALNLF 9 AAV+ALNLF Sbjct: 305 AAVRALNLF 313>NP_001107604 Length = 2694 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVKALNLF 9 AAV+ALN+F Sbjct: 2231 AAVEALNVF 2239>XP_005246845 Length = 1624 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVKALNLF 9 AAV+ALN+F Sbjct: 1148 AAVEALNVF 1156>XP_006712765 Length = 2679 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVKALNLF 9 AAV+ALN+F Sbjct: 2203 AAVEALNVF 2211>XP_006712764 Length = 2697 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVKALNLF 9 AAV+ALN+F Sbjct: 2260 AAVEALNVF 2268>XP_005246844 Length = 2707 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVKALNLF 9 AAV+ALN+F Sbjct: 2231 AAVEALNVF 2239>XP_006712763 Length = 2716 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVKALNLF 9 AAV+ALN+F Sbjct: 2260 AAVEALNVF 2268>XP_006712762 Length = 2723 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVKALNLF 9 AAV+ALN+F Sbjct: 2260 AAVEALNVF 2268>XP_006712761 Length = 2736 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVKALNLF 9 AAV+ALN+F Sbjct: 2260 AAVEALNVF 2268>NP_665803 Length = 1025 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAVKALNLF 9 AAVKAL+L+ Sbjct: 177 AAVKALSLY 185>NP_570853 Length = 852 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AA+KAL L+ Sbjct: 45 AAIKALELY 53>NP_570854 Length = 872 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AA+KAL L+ Sbjct: 65 AAIKALELY 73>NP_000453 Length = 875 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AA+KAL L+ Sbjct: 68 AAIKALELY 76>XP_005268328 Length = 852 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AA+KAL L+ Sbjct: 45 AAIKALELY 53>XP_006720739 Length = 852 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AA+KAL L+ Sbjct: 45 AAIKALELY 53>XP_005268327 Length = 852 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AA+KAL L+ Sbjct: 45 AAIKALELY 53>XP_005268326 Length = 852 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AA+KAL L+ Sbjct: 45 AAIKALELY 53>XP_005268324 Length = 852 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AA+KAL L+ Sbjct: 45 AAIKALELY 53>XP_005268325 Length = 852 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AA+KAL L+ Sbjct: 45 AAIKALELY 53>XP_006720738 Length = 852 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AA+KAL L+ Sbjct: 45 AAIKALELY 53>XP_006720737 Length = 872 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AA+KAL L+ Sbjct: 65 AAIKALELY 73>XP_006720736 Length = 872 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AA+KAL L+ Sbjct: 65 AAIKALELY 73>XP_006714215 Length = 3544 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 AAVKALNLF 9 AAV+A+N+F Sbjct: 2941 AAVEAVNVF 2949>XP_006714214 Length = 3544 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 AAVKALNLF 9 AAV+A+N+F Sbjct: 2941 AAVEAVNVF 2949>XP_005262915 Length = 3544 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 AAVKALNLF 9 AAV+A+N+F Sbjct: 2941 AAVEAVNVF 2949>NP_055806 Length = 3526 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 AAVKALNLF 9 AAV+A+N+F Sbjct: 2923 AAVEAVNVF 2931>NP_057287 Length = 569 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VKALNLF 9 +KALN+F Sbjct: 446 IKALNIF 452>NP_077747 Length = 328 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VKALNLF 9 +KALN+F Sbjct: 205 IKALNIF 211>NP_001035723 Length = 525 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VKALNLF 9 +KALN+F Sbjct: 402 IKALNIF 408>NP_065996 Length = 3184 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AAV A+N+F Sbjct: 2768 AAVDAVNIF 2776>XP_005270064 Length = 1615 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AAV A+N+F Sbjct: 1199 AAVDAVNIF 1207>XP_005270062 Length = 3184 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AAV A+N+F Sbjct: 2768 AAVDAVNIF 2776>XP_005270061 Length = 3184 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AAV A+N+F Sbjct: 2768 AAVDAVNIF 2776>XP_005250066 Length = 358 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VKALNLF 9 +KALN+F Sbjct: 185 IKALNIF 191>XP_005250064 Length = 444 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VKALNLF 9 +KALN+F Sbjct: 321 IKALNIF 327>XP_005250063 Length = 495 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VKALNLF 9 +KALN+F Sbjct: 322 IKALNIF 328>XP_005250062 Length = 568 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VKALNLF 9 +KALN+F Sbjct: 445 IKALNIF 451>XP_005250061 Length = 575 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VKALNLF 9 +KALN+F Sbjct: 402 IKALNIF 408>XP_006716084 Length = 615 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VKALNLF 9 +KALN+F Sbjct: 442 IKALNIF 448>XP_005250060 Length = 618 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VKALNLF 9 +KALN+F Sbjct: 445 IKALNIF 451>XP_005250059 Length = 619 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VKALNLF 9 +KALN+F Sbjct: 446 IKALNIF 452>NP_852478 Length = 1179 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AAVKALNL 8 AAVK LNL Sbjct: 576 AAVKDLNL 583>NP_055192 Length = 621 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VKALNLF 9 +KA+NLF Sbjct: 463 IKAVNLF 469>NP_001123359 Length = 568 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VKALNLF 9 +KA+NLF Sbjct: 410 IKAVNLF 416>NP_065757 Length = 1147 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AA+KA+ L+ Sbjct: 32 AAIKAIKLY 40>NP_001138917 Length = 1125 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AA+KA+ L+ Sbjct: 32 AAIKAIKLY 40>XP_005261074 Length = 1088 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AA+KA+ L+ Sbjct: 32 AAIKAIKLY 40>XP_006724099 Length = 1121 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AA+KA+ L+ Sbjct: 32 AAIKAIKLY 40>XP_006724098 Length = 1143 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AAVKALNLF 9 AA+KA+ L+ Sbjct: 32 AAIKAIKLY 40>XP_005250326 Length = 475 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VKALNLF 9 +KA+NLF Sbjct: 317 IKAVNLF 323>NP_001268232 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AAVKALNL 8 AA++ALN+ Sbjct: 348 AAIEALNI 355>NP_006406 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AAVKALNL 8 AA++ALN+ Sbjct: 348 AAIEALNI 355>NP_001153699 Length = 2330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AAVKALNLF 9 AA++ LN F Sbjct: 183 AAIRVLNCF 191>NP_079413 Length = 2443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AAVKALNLF 9 AA++ LN F Sbjct: 183 AAIRVLNCF 191>NP_001166251 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AVKALNL 8 A+KA+NL Sbjct: 236 AIKAINL 242>NP_001166250 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AVKALNL 8 A+KA+NL Sbjct: 236 AIKAINL 242>NP_443111 Length = 724 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AAVKALNLF 9 A +KA+N F Sbjct: 269 ARIKAINTF 277>NP_954658 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AAVKALNLF 9 A +KA+N F Sbjct: 268 ARIKAINTF 276>XP_006720764 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AAVKALNLF 9 AA++ LN F Sbjct: 183 AAIRVLNCF 191>XP_006720763 Length = 2395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AAVKALNLF 9 AA++ LN F Sbjct: 183 AAIRVLNCF 191>XP_006720762 Length = 2397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AAVKALNLF 9 AA++ LN F Sbjct: 183 AAIRVLNCF 191>XP_005254751 Length = 2407 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AAVKALNLF 9 AA++ LN F Sbjct: 183 AAIRVLNCF 191>XP_006719279 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AAVKALNLF 9 A +KA+N F Sbjct: 269 ARIKAINTF 277>XP_005268670 Length = 654 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AAVKALNLF 9 A +KA+N F Sbjct: 199 ARIKAINTF 207>XP_006719278 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AAVKALNLF 9 A +KA+N F Sbjct: 269 ARIKAINTF 277>XP_005247190 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AVKALNL 8 A+KA+NL Sbjct: 175 AIKAINL 181>XP_006713571 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AVKALNL 8 A+KA+NL Sbjct: 218 AIKAINL 224>NP_001164275 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AAVKALNLF 9 A +KA+N F Sbjct: 269 ARIKAINTF 277>NP_001164279 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AAVKALNLF 9 A +KA+N F Sbjct: 269 ARIKAINTF 277Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.135 0.344 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 255,062 Number of extensions: 415 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |