Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 18 1482 NP_001008781 17 4312 XP_006718827 17 4312 NP_005631 16 5631 NP_001523 16 5631 XP_005258397 16 5631 XP_005258396 16 5631 XP_006722591 16 5631 XP_006718591 16 5631 XP_006718589 16 5631 XP_006718588 16 5631 XP_006718587 16 5631 XP_006718586 16 5631 NP_065772 16 7355 NP_079164 16 7355 NP_001229371 16 7355 NP_919420 16 7355 NP_001124506 16 7355 XP_006724837 16 7355 XP_005272332 16 7355 XP_006713941 16 7355 XP_006713940 16 7355 XP_005272331 16 7355 NP_003310 15 9605 NP_116218 15 9605 NP_597676 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_001073966 15 9605 NP_073752 15 9605 NP_002245 15 9605 XP_006720709 15 9605 XP_005254660 15 9605 XP_006719717 15 9605 XP_005254027 15 9605 XP_005246888 15 9605 XP_006712788 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 XP_005264356 15 9605 NP_078785 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_004110 Length = 993 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AAVEVDVS 8 AAVEVDVS Sbjct: 79 AAVEVDVS 86>NP_001008781 Length = 4557 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AAVEVDVSP 9 AAV+VD P Sbjct: 2091 AAVQVDAEP 2099>XP_006718827 Length = 3479 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AAVEVDVSP 9 AAV+VD P Sbjct: 981 AAVQVDAEP 989>NP_005631 Length = 862 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AAVEVDVSP 9 AAV++++SP Sbjct: 245 AAVQINLSP 253>NP_001523 Length = 456 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVEVDVSP 9 A V+VD+SP Sbjct: 115 ALVKVDMSP 123>XP_005258397 Length = 618 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AAVEVDVSP 9 AAV++++SP Sbjct: 245 AAVQINLSP 253>XP_005258396 Length = 625 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AAVEVDVSP 9 AAV++++SP Sbjct: 245 AAVQINLSP 253>XP_006722591 Length = 827 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AAVEVDVSP 9 AAV++++SP Sbjct: 245 AAVQINLSP 253>XP_006718591 Length = 301 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVEVDVSP 9 A V+VD+SP Sbjct: 115 ALVKVDMSP 123>XP_006718589 Length = 361 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVEVDVSP 9 A V+VD+SP Sbjct: 115 ALVKVDMSP 123>XP_006718588 Length = 361 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVEVDVSP 9 A V+VD+SP Sbjct: 115 ALVKVDMSP 123>XP_006718587 Length = 456 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVEVDVSP 9 A V+VD+SP Sbjct: 115 ALVKVDMSP 123>XP_006718586 Length = 472 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAVEVDVSP 9 A V+VD+SP Sbjct: 115 ALVKVDMSP 123>NP_065772 Length = 1709 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AAVEVDVS 8 AA+E D+S Sbjct: 1142 AAIEADIS 1149>NP_079164 Length = 746 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AAVEVDVSP 9 AAV V VSP Sbjct: 214 AAVYVSVSP 222>NP_001229371 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AVEVDVSP 9 A+E+D+SP Sbjct: 23 AMELDLSP 30>NP_919420 Length = 232 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AVEVDVSP 9 ++EVD+SP Sbjct: 158 SMEVDLSP 165>NP_001124506 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AVEVDVSP 9 ++EVD+SP Sbjct: 158 SMEVDLSP 165>XP_006724837 Length = 1533 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AAVEVDVS 8 AA+E D+S Sbjct: 966 AAIEADIS 973>XP_005272332 Length = 192 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AVEVDVSP 9 ++EVD+SP Sbjct: 158 SMEVDLSP 165>XP_006713941 Length = 206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AVEVDVSP 9 ++EVD+SP Sbjct: 92 SMEVDLSP 99>XP_006713940 Length = 228 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AVEVDVSP 9 ++EVD+SP Sbjct: 114 SMEVDLSP 121>XP_005272331 Length = 272 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AVEVDVSP 9 ++EVD+SP Sbjct: 158 SMEVDLSP 165>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVEVDVS 8 AVE+DVS Sbjct: 8606 AVELDVS 8612>NP_116218 Length = 452 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AAVEVDVSP 9 AAV+V ++P Sbjct: 139 AAVQVGIAP 147>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVEVDVS 8 AVE+DVS Sbjct: 8731 AVELDVS 8737>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVEVDVS 8 AVE+DVS Sbjct: 16030 AVELDVS 16036>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVEVDVS 8 AVE+DVS Sbjct: 15103 AVELDVS 15109>NP_001073966 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AAVEVDVSP 9 AA +VD SP Sbjct: 47 AAGQVDASP 55>NP_073752 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AAVEVDVSP 9 +AVEV V P Sbjct: 533 SAVEVKVEP 541>NP_002245 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VEVDVSP 9 +E+DVSP Sbjct: 712 LELDVSP 718>XP_006720709 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AAVEVDVSP 9 +AVEV V P Sbjct: 262 SAVEVKVEP 270>XP_005254660 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AAVEVDVSP 9 +AVEV V P Sbjct: 533 SAVEVKVEP 541>XP_006719717 Length = 452 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AAVEVDVSP 9 AAV+V ++P Sbjct: 139 AAVQVGIAP 147>XP_005254027 Length = 452 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AAVEVDVSP 9 AAV+V ++P Sbjct: 139 AAVQVGIAP 147>XP_005246888 Length = 22663 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVEVDVS 8 AVE+DVS Sbjct: 4343 AVELDVS 4349>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVEVDVS 8 AVE+DVS Sbjct: 5702 AVELDVS 5708>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVEVDVS 8 AVE+DVS Sbjct: 15658 AVELDVS 15664>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVEVDVS 8 AVE+DVS Sbjct: 17164 AVELDVS 17170>XP_005264356 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VEVDVSP 9 +E+DVSP Sbjct: 711 LELDVSP 717>NP_078785 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AAVEVDVSP 9 AAVE+ V P Sbjct: 377 AAVELTVGP 385>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVEVDVS 8 AVE+DVS Sbjct: 17671 AVELDVS 17677>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVEVDVS 8 AVE+DVS Sbjct: 8798 AVELDVS 8804Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.120 0.304 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 495,871 Number of extensions: 632 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |