Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 18 1482 NP_653080 18 1482 XP_005267292 18 1482 XP_005267291 18 1482 XP_005267290 18 1482 NP_001132931 17 2528 NP_689822 17 2528 XP_005273140 17 2528 XP_006711814 17 2528 XP_005273139 17 2528 XP_005273138 17 2528 NP_001273762 17 3301 NP_005246 17 3301 XP_005272330 17 3301 XP_005272329 17 3301 XP_005272327 17 3301 XP_006713937 17 3301 XP_005272326 17 3301 XP_005272325 17 3301 XP_006726779 17 4312 XP_006721689 17 4312 XP_006710090 17 4312 NP_001139512 16 7355 NP_000162 16 7355 NP_001191676 16 7355 NP_002904 16 7355 NP_116019 16 7355 XP_005267810 16 7355 XP_005268469 16 7355 NP_065853 15 9605 NP_055901 15 9605 NP_671766 15 9605 NP_671756 15 9605 NP_003734 15 9605 XP_005271684 15 9605 XP_006712189 15 9605 XP_005264685 15 9605 XP_005264684 15 9605 XP_005264683 15 9605 XP_005264682 15 9605>NP_005091 Length = 1782 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AASKESESK 9 AASKESE K Sbjct: 225 AASKESEPK 233>NP_653080 Length = 1684 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AASKESESK 9 AASKESE K Sbjct: 127 AASKESEPK 135>XP_005267292 Length = 1677 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AASKESESK 9 AASKESE K Sbjct: 120 AASKESEPK 128>XP_005267291 Length = 1684 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AASKESESK 9 AASKESE K Sbjct: 127 AASKESEPK 135>XP_005267290 Length = 1782 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AASKESESK 9 AASKESE K Sbjct: 225 AASKESEPK 233>NP_001132931 Length = 616 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASKESESK 9 A +KESESK Sbjct: 307 ATTKESESK 315>NP_689822 Length = 725 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASKESESK 9 A +KESESK Sbjct: 307 ATTKESESK 315>XP_005273140 Length = 560 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASKESESK 9 A +KESESK Sbjct: 142 ATTKESESK 150>XP_006711814 Length = 603 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASKESESK 9 A +KESESK Sbjct: 185 ATTKESESK 193>XP_005273139 Length = 766 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASKESESK 9 A +KESESK Sbjct: 348 ATTKESESK 356>XP_005273138 Length = 781 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASKESESK 9 A +KESESK Sbjct: 363 ATTKESESK 371>NP_001273762 Length = 1213 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 AASKESES 8 A+SKESES Sbjct: 712 ASSKESES 719>NP_005246 Length = 1311 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 AASKESES 8 A+SKESES Sbjct: 810 ASSKESES 817>XP_005272330 Length = 1140 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 AASKESES 8 A+SKESES Sbjct: 810 ASSKESES 817>XP_005272329 Length = 1175 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 AASKESES 8 A+SKESES Sbjct: 674 ASSKESES 681>XP_005272327 Length = 1236 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 AASKESES 8 A+SKESES Sbjct: 810 ASSKESES 817>XP_006713937 Length = 1249 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 AASKESES 8 A+SKESES Sbjct: 748 ASSKESES 755>XP_005272326 Length = 1262 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 AASKESES 8 A+SKESES Sbjct: 761 ASSKESES 768>XP_005272325 Length = 1300 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 AASKESES 8 A+SKESES Sbjct: 810 ASSKESES 817>XP_006726779 Length = 430 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASKESESK 9 AAS+E ESK Sbjct: 102 AASRELESK 110>XP_006721689 Length = 438 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASKESESK 9 AAS+E ESK Sbjct: 102 AASRELESK 110>XP_006710090 Length = 255 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASKESESK 9 AAS+E ESK Sbjct: 79 AASRELESK 87>NP_001139512 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AASKESES 8 AASKE+E+ Sbjct: 21 AASKEAEA 28>NP_000162 Length = 449 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AASKESES 8 AASKE+E+ Sbjct: 21 AASKEAEA 28>NP_001191676 Length = 1148 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASKESESK 9 + KESESK Sbjct: 520 SKKESESK 527>NP_002904 Length = 1147 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASKESESK 9 + KESESK Sbjct: 520 SKKESESK 527>NP_116019 Length = 212 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASKESESK 9 ASKE+E K Sbjct: 72 ASKENEEK 79>XP_005267810 Length = 118 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASKESESK 9 ASKE+E K Sbjct: 72 ASKENEEK 79>XP_005268469 Length = 307 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AASKESES 8 AASKE+E+ Sbjct: 21 AASKEAEA 28>NP_065853 Length = 1117 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASKESESK 9 ASK+ ESK Sbjct: 728 ASKKEESK 735>NP_055901 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AASKESESK 9 AAS+E E+K Sbjct: 115 AASQEREAK 123>NP_671766 Length = 1440 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASKESESK 9 ASK+ ESK Sbjct: 737 ASKKKESK 744>NP_671756 Length = 1399 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASKESESK 9 ASK+ ESK Sbjct: 737 ASKKKESK 744>NP_003734 Length = 1441 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASKESESK 9 ASK+ ESK Sbjct: 737 ASKKKESK 744>XP_005271684 Length = 1081 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASKESESK 9 ASK+ ESK Sbjct: 728 ASKKEESK 735>XP_006712189 Length = 1394 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASKESESK 9 ASK+ ESK Sbjct: 690 ASKKKESK 697>XP_005264685 Length = 1399 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASKESESK 9 ASK+ ESK Sbjct: 737 ASKKKESK 744>XP_005264684 Length = 1399 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASKESESK 9 ASK+ ESK Sbjct: 737 ASKKKESK 744>XP_005264683 Length = 1440 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASKESESK 9 ASK+ ESK Sbjct: 737 ASKKKESK 744>XP_005264682 Length = 1441 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASKESESK 9 ASK+ ESK Sbjct: 737 ASKKKESK 744Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.255 0.0776 0.150 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 413,766 Number of extensions: 613 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 20 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |