Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036462 18 1482 NP_001243397 18 1482 XP_005269721 18 1482 NP_006531 16 5631 NP_065945 16 5631 XP_005251190 16 5631 XP_005251188 16 5631 XP_005251189 16 5631 XP_005251187 16 5631 XP_005251186 16 5631 XP_005251185 16 5631 XP_005272347 16 5631 XP_006713960 16 5631 NP_065734 16 7355 NP_001075445 16 7355 NP_079239 16 7355 NP_004711 16 7355 NP_060354 16 7355 NP_055079 16 7355 NP_001177728 16 7355 NP_001177730 16 7355 NP_919288 16 7355 XP_005249911 16 7355 XP_005249910 16 7355 XP_005268460 16 7355 XP_006714837 16 7355 XP_006714836 16 7355 XP_005268457 16 7355 XP_006714833 16 7355 XP_005268456 16 7355 XP_006714831 16 7355 XP_005268455 16 7355 XP_006714134 16 7355 XP_005262758 16 7355 XP_006712548 16 7355 XP_005246130 16 7355 XP_005270547 16 7355 XP_005270546 16 7355 XP_005270543 16 7355 XP_005270542 16 7355 NP_001136087 15 9605 NP_001274686 15 9605 NP_001136086 15 9605 NP_065825 15 9605 NP_001035492 15 9605 NP_055930 15 9605 NP_001274684 15 9605 XP_005265791 15 9605 XP_005265789 15 9605 XP_005265788 15 9605 XP_005265790 15 9605 XP_005264285 15 9605 XP_006712034 15 9605 XP_005264284 15 9605 XP_005264283 15 9605 XP_005264282 15 9605 NP_001136088 15 9605 NP_056067 15 9605>NP_036462 Length = 2073 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AASGKDLSS 9 AASGKD SS Sbjct: 389 AASGKDSSS 397>NP_001243397 Length = 1890 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AASGKDLSS 9 AASGKD SS Sbjct: 389 AASGKDSSS 397>XP_005269721 Length = 2073 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AASGKDLSS 9 AASGKD SS Sbjct: 389 AASGKDSSS 397>NP_006531 Length = 1464 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ASGKDLS 8 A+GKDLS Sbjct: 710 ATGKDLS 716>NP_065945 Length = 709 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AASGKDLSS 9 AA+G+DL S Sbjct: 633 AATGQDLGS 641>XP_005251190 Length = 1395 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ASGKDLS 8 A+GKDLS Sbjct: 710 ATGKDLS 716>XP_005251188 Length = 1464 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ASGKDLS 8 A+GKDLS Sbjct: 710 ATGKDLS 716>XP_005251189 Length = 1464 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ASGKDLS 8 A+GKDLS Sbjct: 710 ATGKDLS 716>XP_005251187 Length = 1464 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ASGKDLS 8 A+GKDLS Sbjct: 710 ATGKDLS 716>XP_005251186 Length = 1464 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ASGKDLS 8 A+GKDLS Sbjct: 710 ATGKDLS 716>XP_005251185 Length = 1464 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ASGKDLS 8 A+GKDLS Sbjct: 710 ATGKDLS 716>XP_005272347 Length = 709 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AASGKDLSS 9 AA+G+DL S Sbjct: 633 AATGQDLGS 641>XP_006713960 Length = 709 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AASGKDLSS 9 AA+G+DL S Sbjct: 633 AATGQDLGS 641>NP_065734 Length = 347 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SGKDLS 8 SGKDLS Sbjct: 266 SGKDLS 271>NP_001075445 Length = 266 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SGKDLS 8 SGKDLS Sbjct: 185 SGKDLS 190>NP_079239 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AASGKDLSS 9 A+SG+D+S+ Sbjct: 2 ASSGEDISN 10>NP_004711 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SGKDLSS 9 SGK+LSS Sbjct: 20 SGKELSS 26>NP_060354 Length = 328 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GKDLSS 9 GKDLSS Sbjct: 132 GKDLSS 137>NP_055079 Length = 970 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASGKDLSS 9 ASG D+SS Sbjct: 867 ASGTDISS 874>NP_001177728 Length = 938 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASGKDLSS 9 ASG D+SS Sbjct: 835 ASGTDISS 842>NP_001177730 Length = 929 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASGKDLSS 9 ASG D+SS Sbjct: 826 ASGTDISS 833>NP_919288 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AASGKDLSS 9 AA+G DL+S Sbjct: 727 AAAGPDLAS 735>XP_005249911 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AASGKDLSS 9 A+SG+D+S+ Sbjct: 2 ASSGEDISN 10>XP_005249910 Length = 801 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AASGKDLSS 9 A+SG+D+S+ Sbjct: 2 ASSGEDISN 10>XP_005268460 Length = 610 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GKDLSS 9 GKDLSS Sbjct: 93 GKDLSS 98>XP_006714837 Length = 628 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GKDLSS 9 GKDLSS Sbjct: 93 GKDLSS 98>XP_006714836 Length = 725 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GKDLSS 9 GKDLSS Sbjct: 93 GKDLSS 98>XP_005268457 Length = 765 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GKDLSS 9 GKDLSS Sbjct: 93 GKDLSS 98>XP_006714833 Length = 774 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GKDLSS 9 GKDLSS Sbjct: 93 GKDLSS 98>XP_005268456 Length = 802 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GKDLSS 9 GKDLSS Sbjct: 93 GKDLSS 98>XP_006714831 Length = 812 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GKDLSS 9 GKDLSS Sbjct: 93 GKDLSS 98>XP_005268455 Length = 857 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GKDLSS 9 GKDLSS Sbjct: 93 GKDLSS 98>XP_006714134 Length = 923 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASGKDLSS 9 ASG D+SS Sbjct: 820 ASGTDISS 827>XP_005262758 Length = 936 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASGKDLSS 9 ASG D+SS Sbjct: 833 ASGTDISS 840>XP_006712548 Length = 637 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AASGKDLSS 9 AA+G DL+S Sbjct: 359 AAAGPDLAS 367>XP_005246130 Length = 637 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AASGKDLSS 9 AA+G DL+S Sbjct: 359 AAAGPDLAS 367>XP_005270547 Length = 178 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SGKDLS 8 SGKDLS Sbjct: 97 SGKDLS 102>XP_005270546 Length = 193 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SGKDLS 8 SGKDLS Sbjct: 112 SGKDLS 117>XP_005270543 Length = 215 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SGKDLS 8 SGKDLS Sbjct: 134 SGKDLS 139>XP_005270542 Length = 346 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SGKDLS 8 SGKDLS Sbjct: 266 SGKDLS 271>NP_001136087 Length = 1160 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASGKDLSS 9 ++GKDLS+ Sbjct: 385 SAGKDLST 392>NP_001274686 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASGKDLSS 9 ASG DLS+ Sbjct: 10 ASGDDLSA 17>NP_001136086 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASGKDLSS 9 ++GKDLS+ Sbjct: 385 SAGKDLST 392>NP_065825 Length = 1006 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AASGKDLS 8 AA+G DLS Sbjct: 760 AANGADLS 767>NP_001035492 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASGKDLSS 9 ASG DLS+ Sbjct: 70 ASGDDLSA 77>NP_055930 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASGKDLSS 9 ASG DLS+ Sbjct: 70 ASGDDLSA 77>NP_001274684 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASGKDLSS 9 ASG DLS+ Sbjct: 114 ASGDDLSA 121>XP_005265791 Length = 272 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASGKDLSS 9 ASG DLS+ Sbjct: 114 ASGDDLSA 121>XP_005265789 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASGKDLSS 9 ASG DLS+ Sbjct: 75 ASGDDLSA 82>XP_005265788 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASGKDLSS 9 ASG DLS+ Sbjct: 114 ASGDDLSA 121>XP_005265790 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASGKDLSS 9 ASG DLS+ Sbjct: 90 ASGDDLSA 97>XP_005264285 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASGKDLSS 9 ++GKDLS+ Sbjct: 420 SAGKDLST 427>XP_006712034 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASGKDLSS 9 ++GKDLS+ Sbjct: 420 SAGKDLST 427>XP_005264284 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASGKDLSS 9 ++GKDLS+ Sbjct: 385 SAGKDLST 392>XP_005264283 Length = 1231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASGKDLSS 9 ++GKDLS+ Sbjct: 420 SAGKDLST 427>XP_005264282 Length = 1231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASGKDLSS 9 ++GKDLS+ Sbjct: 420 SAGKDLST 427>NP_001136088 Length = 1160 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASGKDLSS 9 ++GKDLS+ Sbjct: 385 SAGKDLST 392>NP_056067 Length = 1231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASGKDLSS 9 ++GKDLS+ Sbjct: 420 SAGKDLST 427Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.286 0.104 0.240 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 638,902 Number of extensions: 1298 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |