Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_003650 18 1482 NP_005179 18 1935 NP_620311 17 2528 NP_001185748 17 2528 NP_620310 17 2528 NP_001185749 17 2528 NP_055391 17 2528 NP_001185747 17 2528 XP_006717872 17 2528 XP_005269777 17 2528 XP_005269776 17 2528 XP_006717871 17 2528 XP_005269775 17 2528 NP_078780 17 3301 NP_071332 17 4312 XP_006712964 17 4312 NP_072096 16 5631 XP_005250590 16 5631 XP_006716151 16 5631 XP_006716150 16 5631 XP_006716149 16 5631 XP_005250589 16 5631 NP_001025053 16 7355 NP_055108 16 7355 NP_001182534 16 7355 XP_006716433 16 7355 XP_005273633 16 7355 XP_006716432 16 7355 XP_005273632 16 7355 XP_005245910 16 7355 XP_005245909 16 7355 XP_005245908 16 7355 XP_005245907 16 7355 XP_005245906 16 7355 XP_005245905 16 7355 NP_055853 16 7355 NP_112561 16 7355 NP_000065 15 9605 NP_001180267 15 9605 XP_005276344 15 9605 XP_005249984 15 9605 XP_005276056 15 9605>NP_003650 Length = 658 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AASAATALP 9 AASAATA P Sbjct: 63 AASAATAAP 71>NP_005179 Length = 906 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AASAATALP 9 AASAATA P Sbjct: 847 AASAATASP 855>NP_620311 Length = 594 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASAATALP 9 AA+AATA P Sbjct: 536 AAAAATAFP 544>NP_001185748 Length = 602 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASAATALP 9 AA+AATA P Sbjct: 544 AAAAATAFP 552>NP_620310 Length = 594 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASAATALP 9 AA+AATA P Sbjct: 536 AAAAATAFP 544>NP_001185749 Length = 594 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASAATALP 9 AA+AATA P Sbjct: 536 AAAAATAFP 544>NP_055391 Length = 586 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASAATALP 9 AA+AATA P Sbjct: 528 AAAAATAFP 536>NP_001185747 Length = 586 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASAATALP 9 AA+AATA P Sbjct: 528 AAAAATAFP 536>XP_006717872 Length = 594 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASAATALP 9 AA+AATA P Sbjct: 536 AAAAATAFP 544>XP_005269777 Length = 594 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASAATALP 9 AA+AATA P Sbjct: 536 AAAAATAFP 544>XP_005269776 Length = 594 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASAATALP 9 AA+AATA P Sbjct: 536 AAAAATAFP 544>XP_006717871 Length = 594 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASAATALP 9 AA+AATA P Sbjct: 536 AAAAATAFP 544>XP_005269775 Length = 594 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASAATALP 9 AA+AATA P Sbjct: 536 AAAAATAFP 544>NP_078780 Length = 571 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASAATALP 9 AASAA A+P Sbjct: 59 AASAAPAMP 67>NP_071332 Length = 384 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AASAATALP 9 AA AATA+P Sbjct: 360 AAVAATAVP 368>XP_006712964 Length = 336 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ASAATALP 9 ASAA ALP Sbjct: 139 ASAAAALP 146>NP_072096 Length = 1035 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ASAATALP 9 ++AATALP Sbjct: 461 SAAATALP 468>XP_005250590 Length = 1034 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ASAATALP 9 ++AATALP Sbjct: 461 SAAATALP 468>XP_006716151 Length = 1035 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ASAATALP 9 ++AATALP Sbjct: 461 SAAATALP 468>XP_006716150 Length = 1035 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ASAATALP 9 ++AATALP Sbjct: 461 SAAATALP 468>XP_006716149 Length = 1035 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ASAATALP 9 ++AATALP Sbjct: 461 SAAATALP 468>XP_005250589 Length = 1035 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ASAATALP 9 ++AATALP Sbjct: 461 SAAATALP 468>NP_001025053 Length = 1603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AASAATALP 9 A +AAT LP Sbjct: 218 ATAAATGLP 226>NP_055108 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AASAATALP 9 AAS A ALP Sbjct: 29 AASPARALP 37>NP_001182534 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 AASAATA 7 AASAATA Sbjct: 300 AASAATA 306>XP_006716433 Length = 3069 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AASAATAL 8 A SAATAL Sbjct: 828 AVSAATAL 835>XP_005273633 Length = 3069 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AASAATAL 8 A SAATAL Sbjct: 828 AVSAATAL 835>XP_006716432 Length = 3172 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AASAATAL 8 A SAATAL Sbjct: 931 AVSAATAL 938>XP_005273632 Length = 3172 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AASAATAL 8 A SAATAL Sbjct: 931 AVSAATAL 938>XP_005245910 Length = 1603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AASAATALP 9 A +AAT LP Sbjct: 218 ATAAATGLP 226>XP_005245909 Length = 1603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AASAATALP 9 A +AAT LP Sbjct: 218 ATAAATGLP 226>XP_005245908 Length = 1603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AASAATALP 9 A +AAT LP Sbjct: 218 ATAAATGLP 226>XP_005245907 Length = 1603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AASAATALP 9 A +AAT LP Sbjct: 218 ATAAATGLP 226>XP_005245906 Length = 1603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AASAATALP 9 A +AAT LP Sbjct: 218 ATAAATGLP 226>XP_005245905 Length = 1603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AASAATALP 9 A +AAT LP Sbjct: 218 ATAAATGLP 226>NP_055853 Length = 1427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AASAATALP 9 +ASAA A+P Sbjct: 1156 SASAAVAVP 1164>NP_112561 Length = 2789 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AASAATAL 8 A SAATAL Sbjct: 548 AVSAATAL 555>NP_000065 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SAATALP 9 SAAT LP Sbjct: 12 SAATGLP 18>NP_001180267 Length = 306 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AATALP 9 AATALP Sbjct: 262 AATALP 267>XP_005276344 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AATALP 9 AATALP Sbjct: 201 AATALP 206>XP_005249984 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AATALP 9 AATALP Sbjct: 201 AATALP 206>XP_005276056 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AATALP 9 AATALP Sbjct: 201 AATALP 206Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.100 0.246 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 261,873 Number of extensions: 394 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |