Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055726 20 509 NP_851320 17 4312 NP_001001924 16 5631 NP_001001925 16 5631 NP_001071087 16 5631 NP_112198 16 5631 NP_001171925 16 5631 XP_005273640 16 5631 XP_005273639 16 5631 XP_005273638 16 5631 XP_005273637 16 5631 XP_005273636 16 5631 XP_005273635 16 5631 XP_005273634 16 5631 XP_005249579 16 5631 NP_001171926 16 5631 NP_002560 16 7355 NP_001276753 16 7355 NP_001276752 16 7355 NP_001004439 16 7355 NP_001274442 16 7355 NP_001193665 16 7355 NP_061327 16 7355 NP_057227 16 7355 NP_001138392 16 7355 NP_079202 16 7355 NP_001274441 16 7355 NP_001138395 16 7355 XP_006723657 16 7355 XP_006723656 16 7355 XP_006723655 16 7355 XP_006723654 16 7355 XP_005254285 16 7355 XP_005250665 16 7355 XP_006716198 16 7355 NP_001138467 16 7355 NP_001193531 15 9605 NP_001277261 15 9605 NP_037518 15 9605 NP_998816 15 9605 NP_001277259 15 9605 NP_036233 15 9605 NP_001188379 15 9605 NP_001188380 15 9605 XP_005271544 15 9605>NP_055726 Length = 961 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AAQGQKVGS 9 A QGQKVGS Sbjct: 610 AVQGQKVGS 618>NP_851320 Length = 440 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AQGQKVG 8 AQGQ++G Sbjct: 37 AQGQRIG 43>NP_001001924 Length = 1270 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GQKVGS 9 GQKVGS Sbjct: 402 GQKVGS 407>NP_001001925 Length = 1216 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GQKVGS 9 GQKVGS Sbjct: 402 GQKVGS 407>NP_001071087 Length = 331 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AAQGQKVGS 9 + +GQK+GS Sbjct: 216 SGEGQKLGS 224>NP_112198 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAQGQKVGS 9 AA GQ+VG+ Sbjct: 302 AAGGQRVGA 310>NP_001171925 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAQGQKVGS 9 AA GQ+VG+ Sbjct: 302 AAGGQRVGA 310>XP_005273640 Length = 969 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GQKVGS 9 GQKVGS Sbjct: 402 GQKVGS 407>XP_005273639 Length = 1216 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GQKVGS 9 GQKVGS Sbjct: 402 GQKVGS 407>XP_005273638 Length = 1228 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GQKVGS 9 GQKVGS Sbjct: 402 GQKVGS 407>XP_005273637 Length = 1228 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GQKVGS 9 GQKVGS Sbjct: 402 GQKVGS 407>XP_005273636 Length = 1270 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GQKVGS 9 GQKVGS Sbjct: 402 GQKVGS 407>XP_005273635 Length = 1282 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GQKVGS 9 GQKVGS Sbjct: 402 GQKVGS 407>XP_005273634 Length = 1282 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GQKVGS 9 GQKVGS Sbjct: 402 GQKVGS 407>XP_005249579 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAQGQKVGS 9 AA GQ+VG+ Sbjct: 302 AAGGQRVGA 310>NP_001171926 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAQGQKVGS 9 AA GQ+VG+ Sbjct: 302 AAGGQRVGA 310>NP_002560 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AQGQKV 7 AQGQKV Sbjct: 24 AQGQKV 29>NP_001276753 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AQGQKV 7 AQGQKV Sbjct: 24 AQGQKV 29>NP_001276752 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AQGQKV 7 AQGQKV Sbjct: 24 AQGQKV 29>NP_001004439 Length = 1188 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AAQGQKVGS 9 A +GQ++GS Sbjct: 470 AMRGQQIGS 478>NP_001274442 Length = 449 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAQGQKVGS 9 AA GQ++GS Sbjct: 222 AALGQEMGS 230>NP_001193665 Length = 372 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QGQKVGS 9 +GQK+GS Sbjct: 258 EGQKLGS 264>NP_061327 Length = 339 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QGQKVGS 9 +GQK+GS Sbjct: 225 EGQKLGS 231>NP_057227 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QGQKVGS 9 +GQK+GS Sbjct: 256 EGQKLGS 262>NP_001138392 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAQGQKVGS 9 AA GQ++GS Sbjct: 327 AALGQEMGS 335>NP_079202 Length = 554 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAQGQKVGS 9 AA GQ++GS Sbjct: 327 AALGQEMGS 335>NP_001274441 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAQGQKVGS 9 AA GQ++GS Sbjct: 196 AALGQEMGS 204>NP_001138395 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAQGQKVGS 9 AA GQ++GS Sbjct: 296 AALGQEMGS 304>XP_006723657 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QGQKVGS 9 +GQK+GS Sbjct: 145 EGQKLGS 151>XP_006723656 Length = 261 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QGQKVGS 9 +GQK+GS Sbjct: 147 EGQKLGS 153>XP_006723655 Length = 261 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QGQKVGS 9 +GQK+GS Sbjct: 147 EGQKLGS 153>XP_006723654 Length = 285 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QGQKVGS 9 +GQK+GS Sbjct: 171 EGQKLGS 177>XP_005254285 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AAQGQKVGS 9 A +GQ++GS Sbjct: 368 AMRGQQIGS 376>XP_005250665 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAQGQKVGS 9 AA GQ++GS Sbjct: 187 AALGQEMGS 195>XP_006716198 Length = 448 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAQGQKVGS 9 AA GQ++GS Sbjct: 221 AALGQEMGS 229>NP_001138467 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AQGQKVG 8 A+G+KVG Sbjct: 38 AEGEKVG 44>NP_001193531 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AAQGQKVGS 9 AA G K+GS Sbjct: 32 AALGMKLGS 40>NP_001277261 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AAQGQKVG 8 A QG+K+G Sbjct: 10 AVQGRKMG 17>NP_037518 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 QGQKVGS 9 +GQK+G+ Sbjct: 282 EGQKIGT 288>NP_998816 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 QGQKVGS 9 +GQK+G+ Sbjct: 263 EGQKIGT 269>NP_001277259 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AAQGQKVGS 9 A +GQ VG+ Sbjct: 57 ATEGQSVGT 65Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AAQGQKVGS 9 A +GQ VG+ Sbjct: 214 ATEGQSVGT 222Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AAQGQKVGS 9 A +GQ VG+ Sbjct: 281 ATEGQSVGT 289>NP_036233 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AAQGQKVGS 9 AA+G+ +GS Sbjct: 50 AAEGKSLGS 58>NP_001188379 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AAQGQKVG 8 A QG KVG Sbjct: 13 AVQGGKVG 20>NP_001188380 Length = 118 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AAQGQKVG 8 A QG KVG Sbjct: 13 AVQGGKVG 20>XP_005271544 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AAQGQKVGS 9 AA+G+ +GS Sbjct: 50 AAEGKSLGS 58Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.113 0.284 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 547,390 Number of extensions: 1059 Number of successful extensions: 47 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |