Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 19 665 XP_005266703 19 665 NP_001278017 17 4312 NP_114157 17 4312 NP_001127878 17 4312 NP_001127877 17 4312 NP_689811 17 4312 NP_001275708 17 4312 NP_001094345 17 4312 NP_612147 17 4312 NP_001275709 17 4312 XP_006723474 17 4312 XP_005259362 17 4312 XP_005257163 17 4312 XP_005257162 17 4312 XP_005257160 17 4312 XP_005257159 17 4312 XP_005257157 17 4312 XP_005257155 17 4312 XP_005257154 17 4312 XP_005257153 17 4312 XP_005257152 17 4312 XP_005250213 17 4312 NP_001009899 16 5631 NP_001271204 16 5631 XP_005247266 16 5631 XP_005247265 16 5631 XP_006722198 16 7355 XP_005257783 16 7355 XP_005257782 16 7355 XP_006722197 16 7355 XP_006722196 16 7355 NP_115509 16 7355 NP_598375 15 9605 XP_006714139 15 9605 XP_005262771 15 9605 XP_005262770 15 9605 XP_005262769 15 9605 XP_005262768 15 9605>NP_443179 Length = 2170 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AAQEKRNLV 9 AAQE+RNLV Sbjct: 1162 AAQEERNLV 1170>XP_005266703 Length = 1501 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AAQEKRNLV 9 AAQE+RNLV Sbjct: 493 AAQEERNLV 501>NP_001278017 Length = 2912 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQEKRNL 8 AQEK+NL Sbjct: 1879 AQEKKNL 1885>NP_114157 Length = 2873 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQEKRNL 8 AQEK+NL Sbjct: 1840 AQEKKNL 1846>NP_001127878 Length = 407 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAQEKRNLV 9 AA E+RNL+ Sbjct: 29 AAVERRNLI 37>NP_001127877 Length = 456 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAQEKRNLV 9 AA E+RNL+ Sbjct: 29 AAVERRNLI 37>NP_689811 Length = 808 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QEKRNLV 9 QE+RNLV Sbjct: 198 QERRNLV 204>NP_001275708 Length = 846 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QEKRNLV 9 QE+RNLV Sbjct: 236 QERRNLV 242>NP_001094345 Length = 808 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QEKRNLV 9 QE+RNLV Sbjct: 198 QERRNLV 204>NP_612147 Length = 473 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAQEKRNLV 9 AA E+RNL+ Sbjct: 29 AAVERRNLI 37>NP_001275709 Length = 799 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QEKRNLV 9 QE+RNLV Sbjct: 197 QERRNLV 203>XP_006723474 Length = 2737 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQEKRNL 8 AQEK+NL Sbjct: 1704 AQEKKNL 1710>XP_005259362 Length = 2855 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQEKRNL 8 AQEK+NL Sbjct: 1822 AQEKKNL 1828>XP_005257163 Length = 752 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QEKRNLV 9 QE+RNLV Sbjct: 125 QERRNLV 131>XP_005257162 Length = 786 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QEKRNLV 9 QE+RNLV Sbjct: 236 QERRNLV 242>XP_005257160 Length = 799 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QEKRNLV 9 QE+RNLV Sbjct: 197 QERRNLV 203>XP_005257159 Length = 824 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QEKRNLV 9 QE+RNLV Sbjct: 197 QERRNLV 203>XP_005257157 Length = 825 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QEKRNLV 9 QE+RNLV Sbjct: 198 QERRNLV 204>XP_005257155 Length = 862 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QEKRNLV 9 QE+RNLV Sbjct: 235 QERRNLV 241>XP_005257154 Length = 863 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QEKRNLV 9 QE+RNLV Sbjct: 236 QERRNLV 242>XP_005257153 Length = 863 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QEKRNLV 9 QE+RNLV Sbjct: 236 QERRNLV 242>XP_005257152 Length = 863 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QEKRNLV 9 QE+RNLV Sbjct: 236 QERRNLV 242>XP_005250213 Length = 454 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AAQEKRNLV 9 AA E+RNL+ Sbjct: 29 AAVERRNLI 37>NP_001009899 Length = 2245 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QEKRNLV 9 Q+KRNLV Sbjct: 1522 QKKRNLV 1528>NP_001271204 Length = 399 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QEKRNL 8 QEKRNL Sbjct: 33 QEKRNL 38>XP_005247266 Length = 2189 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QEKRNLV 9 Q+KRNLV Sbjct: 1466 QKKRNLV 1472>XP_005247265 Length = 2211 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QEKRNLV 9 Q+KRNLV Sbjct: 1488 QKKRNLV 1494>XP_006722198 Length = 996 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAQEKRNL 8 AAQEK+ L Sbjct: 870 AAQEKKQL 877>XP_005257783 Length = 999 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAQEKRNL 8 AAQEK+ L Sbjct: 885 AAQEKKQL 892>XP_005257782 Length = 1000 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAQEKRNL 8 AAQEK+ L Sbjct: 885 AAQEKKQL 892>XP_006722197 Length = 1010 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAQEKRNL 8 AAQEK+ L Sbjct: 885 AAQEKKQL 892>XP_006722196 Length = 1011 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAQEKRNL 8 AAQEK+ L Sbjct: 885 AAQEKKQL 892>NP_115509 Length = 984 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAQEKRNL 8 AAQEK+ L Sbjct: 870 AAQEKKQL 877>NP_598375 Length = 1101 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AAQEKRNLV 9 + QE++NL+ Sbjct: 348 SVQERKNLI 356>XP_006714139 Length = 950 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AAQEKRNLV 9 + QE++NL+ Sbjct: 348 SVQERKNLI 356>XP_005262771 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AAQEKRNLV 9 + QE++NL+ Sbjct: 242 SVQERKNLI 250>XP_005262770 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AAQEKRNLV 9 + QE++NL+ Sbjct: 242 SVQERKNLI 250>XP_005262769 Length = 1034 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AAQEKRNLV 9 + QE++NL+ Sbjct: 348 SVQERKNLI 356>XP_005262768 Length = 1064 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AAQEKRNLV 9 + QE++NL+ Sbjct: 311 SVQERKNLI 319Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.118 0.278 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 546,028 Number of extensions: 763 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |