Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 20 299 NP_001120972 20 299 XP_006716052 20 299 XP_006716051 20 299 XP_006721060 17 3301 NP_001164192 17 4312 NP_001164188 17 4312 NP_001164187 17 4312 NP_055382 17 4312 NP_001164186 17 4312 NP_001164189 17 4312 NP_001164185 17 4312 NP_001164190 17 4312 NP_001164191 17 4312 NP_001073996 17 4312 XP_006721412 17 4312 XP_005256317 17 4312 XP_005256316 17 4312 XP_005256315 17 4312 XP_006721411 17 4312 XP_006712602 17 4312 NP_003467 16 5631 NP_000188 16 5631 XP_006720282 16 5631 XP_006720281 16 5631 XP_006720280 16 5631 XP_006720279 16 5631 XP_005267972 16 5631 XP_005267971 16 5631 XP_006720278 16 5631 XP_005267970 16 5631 XP_006718402 16 5631 XP_006717157 16 5631 NP_065766 16 5631 NP_001103132 16 7355 NP_056344 15 9605 NP_940880 15 9605 NP_054868 15 9605 XP_006726692 15 9605 XP_005250342 15 9605 XP_006715519 15 9605 XP_006714166 15 9605 XP_006714164 15 9605 XP_006714163 15 9605 XP_006714162 15 9605 XP_006714161 15 9605 XP_006714160 15 9605 XP_005262823 15 9605 XP_006710063 15 9605>NP_000236 Length = 1390 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AAIQSEVHC 9 A IQSEVHC Sbjct: 152 ADIQSEVHC 160>NP_001120972 Length = 1408 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AAIQSEVHC 9 A IQSEVHC Sbjct: 152 ADIQSEVHC 160>XP_006716052 Length = 1409 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AAIQSEVHC 9 A IQSEVHC Sbjct: 171 ADIQSEVHC 179>XP_006716051 Length = 1427 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AAIQSEVHC 9 A IQSEVHC Sbjct: 171 ADIQSEVHC 179>XP_006721060 Length = 693 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AAIQSEVH 8 AA+Q E+H Sbjct: 399 AAVQGEIH 406>NP_001164192 Length = 660 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAIQSEVH 8 AA+QS VH Sbjct: 299 AAVQSAVH 306>NP_001164188 Length = 888 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAIQSEVH 8 AA+QS VH Sbjct: 527 AAVQSAVH 534>NP_001164187 Length = 888 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAIQSEVH 8 AA+QS VH Sbjct: 527 AAVQSAVH 534>NP_055382 Length = 870 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAIQSEVH 8 AA+QS VH Sbjct: 509 AAVQSAVH 516>NP_001164186 Length = 888 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAIQSEVH 8 AA+QS VH Sbjct: 527 AAVQSAVH 534>NP_001164189 Length = 870 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAIQSEVH 8 AA+QS VH Sbjct: 509 AAVQSAVH 516>NP_001164185 Length = 916 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAIQSEVH 8 AA+QS VH Sbjct: 555 AAVQSAVH 562>NP_001164190 Length = 868 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAIQSEVH 8 AA+QS VH Sbjct: 507 AAVQSAVH 514>NP_001164191 Length = 722 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAIQSEVH 8 AA+QS VH Sbjct: 361 AAVQSAVH 368>NP_001073996 Length = 2116 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AIQSEVHC 9 A+Q EV+C Sbjct: 1705 ALQDEVYC 1712>XP_006721412 Length = 823 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAIQSEVH 8 AA+QS VH Sbjct: 462 AAVQSAVH 469>XP_005256317 Length = 841 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAIQSEVH 8 AA+QS VH Sbjct: 480 AAVQSAVH 487>XP_005256316 Length = 870 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAIQSEVH 8 AA+QS VH Sbjct: 509 AAVQSAVH 516>XP_005256315 Length = 896 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAIQSEVH 8 AA+QS VH Sbjct: 535 AAVQSAVH 542>XP_006721411 Length = 916 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AAIQSEVH 8 AA+QS VH Sbjct: 555 AAVQSAVH 562>XP_006712602 Length = 2142 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AIQSEVHC 9 A+Q EV+C Sbjct: 1731 ALQDEVYC 1738>NP_003467 Length = 194 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AAIQSEVHC 9 AA +SE++C Sbjct: 50 AAHESEIYC 58>NP_000188 Length = 310 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IQSEVHC 9 IQS +HC Sbjct: 150 IQSLIHC 156>XP_006720282 Length = 891 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IQSEVHC 9 +QSE++C Sbjct: 420 LQSEIYC 426>XP_006720281 Length = 937 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IQSEVHC 9 +QSE++C Sbjct: 466 LQSEIYC 472>XP_006720280 Length = 945 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IQSEVHC 9 +QSE++C Sbjct: 474 LQSEIYC 480>XP_006720279 Length = 1191 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IQSEVHC 9 +QSE++C Sbjct: 720 LQSEIYC 726>XP_005267972 Length = 1325 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IQSEVHC 9 +QSE++C Sbjct: 906 LQSEIYC 912>XP_005267971 Length = 1344 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IQSEVHC 9 +QSE++C Sbjct: 906 LQSEIYC 912>XP_006720278 Length = 1349 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IQSEVHC 9 +QSE++C Sbjct: 906 LQSEIYC 912>XP_005267970 Length = 1377 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IQSEVHC 9 +QSE++C Sbjct: 906 LQSEIYC 912>XP_006718402 Length = 238 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AAIQSEVHC 9 AA +SE++C Sbjct: 94 AAHESEIYC 102>XP_006717157 Length = 256 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IQSEVHC 9 IQS +HC Sbjct: 96 IQSLIHC 102>NP_065766 Length = 1364 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IQSEVHC 9 +QSE++C Sbjct: 893 LQSEIYC 899>NP_001103132 Length = 4284 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AIQSEVH 8 A+QSE+H Sbjct: 3080 ALQSELH 3086>NP_056344 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 QSEVHC 9 QSE HC Sbjct: 359 QSEGHC 364>NP_940880 Length = 832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 QSEVHC 9 QSE HC Sbjct: 331 QSEWHC 336>NP_054868 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 AIQSEVH 8 A+Q+E+H Sbjct: 201 ALQAEIH 207>XP_006726692 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 AIQSEVH 8 A+Q E+H Sbjct: 369 AVQGEIH 375>XP_005250342 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 AIQSEVH 8 A+Q+E+H Sbjct: 201 ALQAEIH 207>XP_006715519 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 QSEVHC 9 QSE HC Sbjct: 349 QSEGHC 354>XP_006714166 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AIQSEVH 8 +IQSE+H Sbjct: 69 SIQSELH 75>XP_006714164 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AIQSEVH 8 +IQSE+H Sbjct: 10 SIQSELH 16>XP_006714163 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AIQSEVH 8 +IQSE+H Sbjct: 10 SIQSELH 16>XP_006714162 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AIQSEVH 8 +IQSE+H Sbjct: 10 SIQSELH 16>XP_006714161 Length = 1020 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AIQSEVH 8 +IQSE+H Sbjct: 19 SIQSELH 25>XP_006714160 Length = 1047 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AIQSEVH 8 +IQSE+H Sbjct: 69 SIQSELH 75>XP_005262823 Length = 1070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AIQSEVH 8 +IQSE+H Sbjct: 69 SIQSELH 75>XP_006710063 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 AIQSEVH 8 A+Q E+H Sbjct: 400 AVQGEIH 406Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.121 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 475,360 Number of extensions: 700 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |