Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 18 1135 NP_001091680 18 1135 NP_001091679 18 1135 XP_006713048 18 1135 XP_006713047 18 1135 XP_006713046 18 1135 XP_005264943 18 1135 NP_002221 17 3301 NP_068831 17 3301 XP_006721941 17 3301 XP_006721940 17 3301 XP_006721939 17 3301 XP_006721938 17 3301 XP_006721937 17 3301 XP_006721936 17 3301 XP_006721935 17 3301 XP_006721934 17 3301 XP_005257370 17 3301 NP_001229825 16 7355 NP_001229826 16 7355 NP_055477 16 7355 NP_001129501 16 7355 XP_006724448 16 7355 XP_006724447 16 7355 XP_005261922 16 7355 XP_005261921 16 7355 XP_005261920 16 7355 XP_005261919 16 7355>NP_001895 Length = 781 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AAAVLFQMS 9 AAAVLF+MS Sbjct: 655 AAAVLFRMS 663>NP_001091680 Length = 781 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AAAVLFQMS 9 AAAVLF+MS Sbjct: 655 AAAVLFRMS 663>NP_001091679 Length = 781 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AAAVLFQMS 9 AAAVLF+MS Sbjct: 655 AAAVLFRMS 663>XP_006713048 Length = 720 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AAAVLFQMS 9 AAAVLF+MS Sbjct: 655 AAAVLFRMS 663>XP_006713047 Length = 774 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AAAVLFQMS 9 AAAVLF+MS Sbjct: 648 AAAVLFRMS 656>XP_006713046 Length = 774 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AAAVLFQMS 9 AAAVLF+MS Sbjct: 648 AAAVLFRMS 656>XP_005264943 Length = 781 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AAAVLFQMS 9 AAAVLF+MS Sbjct: 655 AAAVLFRMS 663>NP_002221 Length = 745 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAAVLFQMS 9 AAAVLF++S Sbjct: 645 AAAVLFRIS 653>NP_068831 Length = 745 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAAVLFQMS 9 AAAVLF++S Sbjct: 645 AAAVLFRIS 653>XP_006721941 Length = 745 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAAVLFQMS 9 AAAVLF++S Sbjct: 645 AAAVLFRIS 653>XP_006721940 Length = 745 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAAVLFQMS 9 AAAVLF++S Sbjct: 645 AAAVLFRIS 653>XP_006721939 Length = 745 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAAVLFQMS 9 AAAVLF++S Sbjct: 645 AAAVLFRIS 653>XP_006721938 Length = 745 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAAVLFQMS 9 AAAVLF++S Sbjct: 645 AAAVLFRIS 653>XP_006721937 Length = 745 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAAVLFQMS 9 AAAVLF++S Sbjct: 645 AAAVLFRIS 653>XP_006721936 Length = 745 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAAVLFQMS 9 AAAVLF++S Sbjct: 645 AAAVLFRIS 653>XP_006721935 Length = 762 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAAVLFQMS 9 AAAVLF++S Sbjct: 662 AAAVLFRIS 670>XP_006721934 Length = 783 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAAVLFQMS 9 AAAVLF++S Sbjct: 683 AAAVLFRIS 691>XP_005257370 Length = 783 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AAAVLFQMS 9 AAAVLF++S Sbjct: 683 AAAVLFRIS 691>NP_001229825 Length = 1603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AAVLFQM 8 AAVLF+M Sbjct: 1395 AAVLFEM 1401>NP_001229826 Length = 1503 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AAVLFQM 8 AAVLF+M Sbjct: 1295 AAVLFEM 1301>NP_055477 Length = 1572 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AAVLFQM 8 AAVLF+M Sbjct: 1364 AAVLFEM 1370>NP_001129501 Length = 1594 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AAVLFQM 8 AAVLF+M Sbjct: 1386 AAVLFEM 1392>XP_006724448 Length = 1490 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AAVLFQM 8 AAVLF+M Sbjct: 1282 AAVLFEM 1288>XP_006724447 Length = 1516 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AAVLFQM 8 AAVLF+M Sbjct: 1308 AAVLFEM 1314>XP_005261922 Length = 1525 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AAVLFQM 8 AAVLF+M Sbjct: 1317 AAVLFEM 1323>XP_005261921 Length = 1581 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AAVLFQM 8 AAVLF+M Sbjct: 1373 AAVLFEM 1379>XP_005261920 Length = 1594 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AAVLFQM 8 AAVLF+M Sbjct: 1386 AAVLFEM 1392>XP_005261919 Length = 1603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AAVLFQM 8 AAVLF+M Sbjct: 1395 AAVLFEM 1401Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.125 0.300 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 289,744 Number of extensions: 290 Number of successful extensions: 28 Number of sequences better than 10000.0: 28 Number of HSP's gapped: 28 Number of HSP's successfully gapped: 28 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |